Contig 012188:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C07Sequence576012188 (5)ref|XP_009768363.1|2e-53PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana sylvestris] ref|728010994 (4)
JMFF024N10Sequence460012188 (5)ref|XP_011085424.1|3e-34PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Sesamum indicum]691010994 (4)ref|XP_009601056.1|4e-35PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana tomentosiformis]
JMFS027D07Sequence559012188 (5)gb|ACU23227.1|2e-40unknown [Glycine max]
JMFS086E04Sequence612012188 (5)ref|XP_009768363.1|1e-51PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana sylvestris] ref|
JMSF049H09Sequence635012188 (5)gb|ACU23227.1|3e-54unknown [Glycine max]746010994 (4)

Alignment

This contig is upended


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JMFF010C07+                                             GAAGGGCAGCCCGAATAACAACTAAC
JMFS086E04+                                             GAAGGGCAGCCCGAATAACAACTAAC
JMSF049H09+                                    TCTGCAGCTGAAGGGCAGCCCGAATAACAACTAAC
                      ____________________________________________________________
consensus                                      TCTGCAGCTGAAGGGCAGCCCGAATAACAACTAAC
 
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JMFS027D07+                                               AACATGCCCCGCCCAATCACAATT
JMFF010C07+           TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
JMFS086E04+           TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCNCCGCCCAATCACAATT
JMSF049H09+           TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
                      ____________________________________________________________
consensus             TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
 
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JMFS027D07+           CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFF010C07+           CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFF024N10+            TGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFS086E04+           CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMSF049H09+           CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
                      ____________________________________________________________
consensus             CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
 
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JMFS027D07+           CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFF010C07+           CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFF024N10+           CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFS086E04+           CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMSF049H09+           CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
                      ____________________________________________________________
consensus             CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
 
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JMFS027D07+           GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFF010C07+           GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFF024N10+           GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFS086E04+           GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMSF049H09+           GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
                      ____________________________________________________________
consensus             GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
 
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JMFS027D07+           CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFF010C07+           CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFF024N10+           CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFS086E04+           CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMSF049H09+           CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
                      ____________________________________________________________
consensus             CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
 
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JMFS027D07+           GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFF010C07+           GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFF024N10+           GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFS086E04+           GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMSF049H09+           GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
                      ____________________________________________________________
consensus             GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
 
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JMFS027D07+           TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
JMFF010C07+           TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC                 
JMFF024N10+           TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC                 
JMFS086E04+           TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC                 
JMSF049H09+           TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
                      ____________________________________________________________
consensus             TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
 
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JMFS027D07+           TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
JMSF049H09+           TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
                      ____________________________________________________________
consensus             TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
 
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JMFS027D07+           CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
JMSF049H09+           CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
                      ____________________________________________________________
consensus             CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
 
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JMFS027D07+           TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCT      
JMSF049H09+           TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCTATGCTC
                      ____________________________________________________________
consensus             TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCTATGCTC