| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024G18 | Sequence | 464 | 012186 (6) | ref|XP_009788548.1| | 8e-52 | PREDICTED: thioredoxin domain-containing protein PLP3B-like isoform X2 [Nicotia | 808 | 012186 (6) | ref|XP_011083186.1| | 3e-78 | PREDICTED: thioredoxin domain-containing protein PLP3B [Sesamum indicum] ref|XP |
| JMSF021D16 | Sequence | 675 | 012186 (6) | ref|XP_011083186.1| | 2e-104 | PREDICTED: thioredoxin domain-containing protein PLP3B [Sesamum indicum] ref|XP | 797 | 012186 (6) | ref|XP_011083186.1| | 4e-74 | PREDICTED: thioredoxin domain-containing protein PLP3B [Sesamum indicum] ref|XP |
| JMSF049F15 | Sequence | 703 | 012186 (6) | emb|CBI17460.3| | 1e-80 | unnamed protein product [Vitis vinifera] | 793 | 012186 (6) | ref|XP_011083186.1| | 5e-56 | PREDICTED: thioredoxin domain-containing protein PLP3B [Sesamum indicum] ref|XP |
This contig is upended
. : . : . : . : . : . :
rJMSF021D16- GTATGTCACTCAAATACATAT
rJMSF049F15- GTATGTCACTCAAATACATAT
rJMFF024G18- AAGTAAGCCACACCAGTATGTCACTCAAATACATAT
____________________________________________________________
consensus AAGTAAGCCACACCAGTATGTCACTCAAATACATAT
. : . : . : . : . : . :
rJMSF021D16- ACTAGTAGTTACTACACTTTAGATTTAGAATCCCTGCACAACTCCATAATGTTACATAAT
rJMSF049F15- ACTAGTAGTTACTACACTTTAGATTTAGAATCCCTGCACAACTCCATAATGTTACATAAT
rJMFF024G18- ACTAGTAGTTACTACACTTTAGATTTAGAATCCCTGCACAACTCCATAATGTTACATAAT
____________________________________________________________
consensus ACTAGTAGTTACTACACTTTAGATTTAGAATCCCTGCACAACTCCATAATGTTACATAAT
. : . : . : . : . : . :
rJMSF021D16- GAAAATTCATTTTTCTTATCATCATACAATGCTTTTTTTGTTTTTGGTCAATAGAGATGA
rJMSF049F15- GAAAATTCATTTTTCTTATCATCATACAATGCTTTTTTTGTTTTTGGTCAATAGAGATGA
rJMFF024G18- GAAAATTCATTTTTCTTATCATCATACAATGCTTTTTTTGTTTTTGGTCAATAGAGATGA
____________________________________________________________
consensus GAAAATTCATTTTTCTTATCATCATACAATGCTTTTTTTGTTTTTGGTCAATAGAGATGA
. : . : . : . : . : . :
rJMSF021D16- AGCTCTGCTAAAATGATTACTTCCACCAAATTCTCTCCCTCTTGTACTTGAAGAATAGTA
rJMSF049F15- AGCTCTGCTAAAATGATTACTTCCACCAAATTCTCTCCCTCTTGTACTTGAAGAATAGTA
rJMFF024G18- AGCTCTGCTAAAATGATTACTTCCACCAAATTCTCTCCCTCTTGTACTTGAAGAATAGTA
____________________________________________________________
consensus AGCTCTGCTAAAATGATTACTTCCACCAAATTCTCTCCCTCTTGTACTTGAAGAATAGTA
. : . : . : . : . : . :
rJMSF021D16- CACAAAACGTAAAACGGTAAAAGGTCATCCAAGACACTGCACTCTCCTAATCGTCTGAAA
rJMSF049F15- CACAAAACGTAAAACGGTAAAAGGTCATCCAAGACACTGCACTCTCCTAATCGTCTGAAA
rJMFF024G18- CACAAAACGTAAAACGGTAAAAGGTCATCCAAGACACTGCACTCTCCTAATCGTCTGAAA
____________________________________________________________
consensus CACAAAACGTAAAACGGTAAAAGGTCATCCAAGACACTGCACTCTCCTAATCGTCTGAAA
. : . : . : . : . : . :
rJMSF021D16- TGCCAAGCATGACAGTCTCGGCAGTTTGCAGCTGGGATAAAGACCGGCTTTCTTCAAATT
rJMSF049F15- TGCCAAGCATGACAGTCTCGGCAGTTTGCAGCTGGGATAAAGACCGGCTTTCTTCAAATT
rJMFF024G18- TGCCAAGCATGACAGTCTCGGCAGTTTGCAGCTGGGATAAAGACCGGCTTTCTTCAAATT
____________________________________________________________
consensus TGCCAAGCATGACAGTCTCGGCAGTTTGCAGCTGGGATAAAGACCGGCTTTCTTCAAATT
. : . : . : . : . : . :
rJMSF021D16- CCTTTATCAATCGGAATCTGAATCAGAATGCACAGATGACCTCACCGCCCTGCGTCCATT
rJMSF049F15- CCTTTATCAATCGGAATCTGAATCAGAATGCGCAGATGACCTCACCGCCCTGCGTCCATT
rJMFF024G18- CCTTTATCAATCGGAATCTGAATCAGAATGCGCAGATGACCTCACCGCCCTGCGTCCATT
____________________________________________________________
consensus CCTTTATCAATCGGAATCTGAATCAGAATGCGCAGATGACCTCACCGCCCTGCGTCCATT
. : . : . : . : . : . :
rJMSF021D16- ATCATAATCTCTCTCATCGTCATCATCATCTGGTTTGTTCTCCTTGATTATTCCTTTCTT
rJMSF049F15- ATCATAATCTCTCTCATCGTCATCATCATCTGGTTTGTTCTCCTTGATTATTCCTTTCTT
rJMFF024G18- ATCATAATCTCTCTCATCGTCATCATCATCTGGTTTGTTCTCCTTGATTATTCCTTTCTT
____________________________________________________________
consensus ATCATAATCTCTCTCATCGTCATCATCATCTGGTTTGTTCTCCTTGATTATTCCTTTCTT
. : . : . : . : . : . :
rJMSF021D16- TAACAGATAAGTTTCCAGTGTTTTTGTGGAGAAATCATCCTTTCCTCCCAGGTCCTGGAA
rJMSF049F15- TAACAGATAAGTTTCCAGTGTTTTTGTGGAGAAATCATCCTTTCCTCCCAGGTCCTGGAA
rJMFF024G18- TAACAGATAAGTTTCCAGTGTTTTTGTGGAGAAATCATCCTTTCCTCCCAGGTCCTGGAA
JMSF021D16+ AGAAATCATCCTTTCCTCCCAGGTCCTGGAA
JMSF049F15+ GTGTTTTTGTGGAGAAATCATCCTTTCCTCCCAGGTCCTGGAA
____________________________________________________________
consensus TAACAGATAAGTTTCCAGTGTTTTTGTGGAGAAATCATCCTTTCCTCCCAGGTCCTGGAA
. : . : . : . : . : . :
rJMSF021D16- TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
rJMSF049F15- TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
rJMFF024G18- TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
JMSF021D16+ TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
JMSF049F15+ TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
____________________________________________________________
consensus TCCAACCAGCCTATCTGTAGCAATTCCTTTCCTGAACAAGATGACACATGGCAAAGTTTT
. : . : . : . : . : . :
rJMSF021D16- GATTCCTAGCTTGGTAAC-AAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
rJMSF049F15- GATTCCTAGCTTGGTAACAAAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
rJMFF024G18- GATTCCTAGCTTGGTAAC-AAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
JMSF021D16+ GATTCCTAGCTTGGTAAC-AAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
JMSF049F15+ GATTCCTAGCTTGGTAACAAAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
____________________________________________________________
consensus GATTCCTAGCTTGGTAAC-AAAAAAGGGAGCATTCTCTGCATCCAATTTTACGAACTTAG
. : . : . : . : . : . :
rJMSF021D16- TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
rJMSF049F15- TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
rJMFF024G18- TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
JMSF021D16+ TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
JMSF049F15+ TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
____________________________________________________________
consensus TATCAAAATGCCTTGGCGCAAGTGACTTTAAATGCTTATCCATGATCTTGCATCGGTAAA
. : . : . : . : . : . :
rJMSF021D16- ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
rJMSF049F15- ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
rJMFF024G18- ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
JMSF021D16+ ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
JMFF024G18+ TCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
JMSF049F15+ ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
____________________________________________________________
consensus ACTCTCTATGGTAAAAGTGACAAATCACTTTTTCACTGCCAGTAACTTCACCCAAAAAGT
. : . : . : . : . : . :
rJMSF021D16- CCCCTTCAGTAATCTCTCTATACTCTCCANGCCNATGCTTTTTCA
rJMSF049F15- CCCCTTCAGTAATCTCACTATACTCTCCANGCCCATGCTTT
rJMFF024G18- CCCCTTCAGTAATCTCTCTATACTCTCCATGCCCATGCTTTTTCAATTCTTGT
JMSF021D16+ CCCCTTCAGTAATCTCTCTATACTCTCCATGCCCATGCTTTTTCAATTCTTGTCGCTTCT
JMFF024G18+ CCCCTTCAGTAATCTCTCTATACTCTCCATGCCCATGCTTTTTCAATTCTTGTCGCTTCT
JMSF049F15+ CCCCTTCAGTAATCTCACTATACTCTCCATGCCCATGCTTTTTCAATTCTTGTCGCTTCT
____________________________________________________________
consensus CCCCTTCAGTAATCTCTCTATACTCTCCATGCCCATGCTTTTTCAATTCTTGTCGCTTCT
. : . : . : . : . : . :
JMSF021D16+ CAGTTTCTTTCTTGAGAGCAGCAATCCTATCAGCATGCAACTTTTCCAATTCAGGATCAT
JMFF024G18+ CAGTTTCTTTCTTGAGAGCAGCAATCCTATCAGCATGCAACTTTTCCAATTCAGGATCAT
JMSF049F15+ CAGTTTCTTTCTTGAGAGCAGCAATCCTATCAGCATGCAACTTTTCCAATTCAGGATCAT
____________________________________________________________
consensus CAGTTTCTTTCTTGAGAGCAGCAATCCTATCAGCATGCAACTTTTCCAATTCAGGATCAT
. : . : . : . : . : . :
JMSF021D16+ CCATTAGCTCATCAAGATCAAAATCTACATTAACAGAACTTGAAGTCTGTGCCTTGTCCT
JMFF024G18+ CCATTAGCTCATCAAGATCAAAATCTACATTAACAGAACTTGAAGTCTGTGCCTTGTCCT
JMSF049F15+ CCATTAGCTCATCAAGATCAAAATCTACATTAACAGAACTTGAAGTCTGTGCCTTGTCCT
____________________________________________________________
consensus CCATTAGCTCATCAAGATCAAAATCTACATTAACAGAACTTGAAGTCTGTGCCTTGTCCT
. : . : . : . : . : . :
JMSF021D16+ TGGATAGCACTTCCTTTTGATAATCGCGAGCTGCCGCGGCCATGACATTTCCAAATGCCA
JMFF024G18+ TGGATAGCACTTCCTTTTGATAATCGCGAGCTGCCGCGGCCATGACATTTCCAAATGCCA
JMSF049F15+ TGGATAGCACTTCCTTTTGATAATCGCGAGCTGCCGCGGCCATGACATTTCCAAATGCCA
____________________________________________________________
consensus TGGATAGCACTTCCTTTTGATAATCGCGAGCTGCCGCGGCCATGACATTTCCAAATGCCA
. : . : . : . : . : . :
JMSF021D16+ ACGTAGAAAGAGTTGATTTCACCGAGTCCGGATCCATTTCTAGCTCTATCTCCGAATTAC
JMFF024G18+ ACGTAGAAAGAGTTGATTTCACCGAGTCCGGATCCATTTCTAGCTCTATCTCCGAATTAC
JMSF049F15+ ACGTAGAAAGAGTTGATTTCACCGAGTCCGGATCCATTTCTAGCTCTATCTCCGAATTAC
____________________________________________________________
consensus ACGTAGAAAGAGTTGATTTCACCGAGTCCGGATCCATTTCTAGCTCTATCTCCGAATTAC
. : . : . : . : . : . :
JMSF021D16+ AATTCAAATTCACGGCGGAATCTAAACGAGAACGAAGATCTGGATTTCAACTTTCAAGCG
JMFF024G18+ AATTCAAATTCACGGCGGAATCTAAACGAGAACGAAGATCTGGATTTCAACTTTCAAGCG
JMSF049F15+ AATTCAAATTCACGGCGGAATCTAAACGAGAACGAAGATCTGGATTTCAACTTTCAAGCG
____________________________________________________________
consensus AATTCAAATTCACGGCGGAATCTAAACGAGAACGAAGATCTGGATTTCAACTTTCAAGCG
. : . : . : . : . : . :
JMSF021D16+ TGGGAACTCTCACCAAATCTCCCAATCCAAGCAGCGCACTCCG
JMFF024G18+ TGGGAACTCTCACCAAATCTCCCAATCCAAGCAGCGCACTCCG
JMSF049F15+ TGGGAACTCTCACCAAATCTCCCAATCCAAGCAGCGCACTCCGCAACTGTGTTTCTTCTC
____________________________________________________________
consensus TGGGAACTCTCACCAAATCTCCCAATCCAAGCAGCGCACTCCGCAACTGTGTTTCTTCTC