Contig 012185:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN031M19Sequence527012185 (3)emb|CDO97492.1|7e-74unnamed protein product [Coffea canephora]
JMSF049E05Sequence639012185 (3)ref|XP_009803651.1|7e-49PREDICTED: peroxidase 43-like isoform X2 [Nicotiana sylvestris]733012185 (3)ref|XP_009801435.1|8e-105PREDICTED: peroxidase 43-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN031M19+                                      ATAAATTATAATGATATATATATGTACCATGAG
                      ____________________________________________________________
consensus                                        ATAAATTATAATGATATATATATGTACCATGAG
 
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JMFN031M19+           AATGAAGCTTAATTGGTTTTGTACATATAATAATGTAATATAATTAAATAATTAATTGAT
rJMSF049E05-                     ATTGGTTTTGTACATATAATAATGTAATATAATTAAATAATTAATTGAT
                      ____________________________________________________________
consensus             AATGAAGCTTAATTGGTTTTGTACATATAATAATGTAATATAATTAAATAATTAATTGAT
 
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JMFN031M19+           CAATTAAAAGCTGCACATGAACGCCTAATTTTCCCTTGGGAGCCACTTAGAACACCAATT
rJMSF049E05-          CAATTAAAAGCTGCACATGAACGCCTAATTTTCCCTTGGGAGCCACTTAGAACACCAATT
                      ____________________________________________________________
consensus             CAATTAAAAGCTGCACATGAACGCCTAATTTTCCCTTGGGAGCCACTTAGAACACCAATT
 
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JMFN031M19+           CTTCCCATTTTCACCATGGCATCAGCGAAGTCGTCCTCGAACGACGGCCGGAGAAACGGC
rJMSF049E05-          CTTCCCATTTTCACCATGGCATCAGCGAAGTCGTCCTCGAACGACGGCCGGAGAAACGGC
                      ____________________________________________________________
consensus             CTTCCCATTTTCACCATGGCATCAGCGAAGTCGTCCTCGAACGACGGCCGGAGAAACGGC
 
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JMFN031M19+           AAACCGCCGAAGTAAGAATCCACGGCGTTCCTCGTTACGTCATCCTCGTACAGCCTCGCA
rJMSF049E05-          AAACCGCCGAAGTAAGAATCCACGGCGTTCCTCGTTACGTCATCCTCGTACAGCCTCGCA
                      ____________________________________________________________
consensus             AAACCGCCGAAGTAAGAATCCACGGCGTTCCTCGTTACGTCATCCTCGTACAGCCTCGCA
 
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JMFN031M19+           TCGGACTGCAACACTGCGAACCCACTCCTGATGTTCTGCAGAATTTGGCTGTCGAACGTT
rJMSF049E05-          TCGGACTGCAACACTGCGAACCCACTCCTGATGTTCTGCAGAATTTGGCTGTCGAACGTT
                      ____________________________________________________________
consensus             TCGGACTGCAACACTGCGAACCCACTCCTGATGTTCTGCAGAATTTGGCTGTCGAACGTT
 
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JMFN031M19+           TGGCCGCTGCCGTGGTCGATCGGTAACCGGACGTTGACGTCGCCGTTCTGCGGGCACGTC
rJMSF049E05-          TGGCCGCTGCCGTGGTCGATCGGTAACCGGACGTTGACGTCGCCGTTCTGCGGGCACGTC
                      ____________________________________________________________
consensus             TGGCCGCTGCCGTGGTCGATCGGTAACCGGACGTTGACGTCGCCGTTCTGCGGGCACGTC
 
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JMFN031M19+           GCCTTTAGCTCCGGCAGTAATTCGGGGCTTATCGACGGGTCGGAACCCCCGACGCCGGGG
rJMSF049E05-          GCCTTTAGCTCCGGCAGTAATTCGGGGCTTATCGACNGGTCGGAACCCCCGACGCCGGGG
                      ____________________________________________________________
consensus             GCCTTTAGCTCCGGCAGTAATTCGGGGCTTATCGACGGGTCGGAACCCCCGACGCCGGGG
 
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JMFN031M19+           AAGTTGTAGAGGCGATTGGTCATGAAGAAGCATGCCGTGGTTCCAATTGTGTGTGCAGCA
rJMSF049E05-          AAGTTGTAGAGGCGATTGGTCATGAAGAAGCATGCCGTGGTTCCAATTGTGTGTGCAGCA
                      ____________________________________________________________
consensus             AAGTTGTAGAGGCGATTGGTCATGAAGAAGCATGCCGTGGTTCCAATTGTGTGTGCAGCA
 
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JMFN031M19+           CTTAGGACAACAAG                                              
rJMSF049E05-          CTTAGGACAACAAGGTCATTTTCGGAAAGGCCTTTATTGATAAACTTGTTTTTAAGAGTT
                      ____________________________________________________________
consensus             CTTAGGACAACAAGGTCATTTTCGGAAAGGCCTTTATTGATAAACTTGTTTTTAAGAGTT
 
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rJMSF049E05-          TGAATTGAATCATCAATGTCTGGCATGTCGTCTGCCAGTGACAAATTGGAAACCATTCCA
                      ____________________________________________________________
consensus             TGAATTGAATCATCAATGTCTGGCATGTCGTCTGCCAGTGACAAATTGGAAACCATTCCA
 
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rJMSF049E05-          TCTCTTCTCCCCATTTCCACCCCGTACGACGGTCCATTTGCCAAAACGACAGCTTCTCTA
JMSF049E05+                                CCGTACGACGGTCCATTTGCCAAAACGACAGCTTCTCTA
                      ____________________________________________________________
consensus             TCTCTTCTCCCCATTTCCACCCCGTACGACGGTCCATTTGCCAAAACGACAGCTTCTCTA
 
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rJMSF049E05-          GCTGCCAATGCTACAATATCAGCACAAGAAACAATTCCTGGACAAACCGCCTCCACTTCT
JMSF049E05+           GCTGCCAATGCTNCAATATCAGCACAAGAAACAATTCCTGGACAAACCGCCTCCACTTCT
                      ____________________________________________________________
consensus             GCTGCCAATGCTACAATATCAGCACAAGAAACAATTCCTGGACAAACCGCCTCCACTTCT
 
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rJMSF049E05-          GCCTTTGCTTTTTCTATCACCTCA                                    
JMSF049E05+           GCCTNTGCTTTTTCTATCACCTCAAATCCCCCCACTCCTTGGTGCCCGAATGCATGCCTC
                      ____________________________________________________________
consensus             GCCTTTGCTTTTTCTATCACCTCAAATCCCCCCACTCCTTGGTGCCCGAATGCATGCCTC
 
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JMSF049E05+           TCTGAAATCTCCCCATTATCAACCAATATCGACCCGTCACACCCCTGAACGAAGCAATCG
                      ____________________________________________________________
consensus             TCTGAAATCTCCCCATTATCAACCAATATCGACCCGTCACACCCCTGAACGAAGCAATCG
 
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JMSF049E05+           TGGAAATGGAGGCGGAGCAAGACGGGAGCAATGTTAGCGTTGGAGGCGGCGACGTCGCGG
                      ____________________________________________________________
consensus             TGGAAATGGAGGCGGAGCAAGACGGGAGCAATGTTAGCGTTGGAGGCGGCGACGTCGCGG
 
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JMSF049E05+           ATAACGCCGCCGACGATTGCTCCGACGTTAGGGCAACTGTCGTCGTAGAAACTCACGCTA
                      ____________________________________________________________
consensus             ATAACGCCGCCGACGATTGCTCCGACGTTAGGGCAACTGTCGTCGTAGAAACTCACGCTA
 
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JMSF049E05+           AGCTGCCCTTGTGAAACCCCACTCAGATGACTCCAAATAGTAAGAACCAACACTATAGCT
                      ____________________________________________________________
consensus             AGCTGCCCTTGTGAAACCCCACTCAGATGACTCCAAATAGTAAGAACCAACACTATAGCT
 
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JMSF049E05+           ATCATATTAATTAGTTGCAGATTTTATCTGTGATAATATATATGTATATCTGTTTCTTTA
                      ____________________________________________________________
consensus             ATCATATTAATTAGTTGCAGATTTTATCTGTGATAATATATATGTATATCTGTTTCTTTA
 
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JMSF049E05+           GAGAAATAATGTTTNTAATTTGATTGAATATAGAGGAGATAGCTGCTAGTATATATATAT
                      ____________________________________________________________
consensus             GAGAAATAATGTTTNTAATTTGATTGAATATAGAGGAGATAGCTGCTAGTATATATATAT
 
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JMSF049E05+           GTGTGTGAGAGAGAGAGGGGGAGAGAGAGAGAGAGATTGCTAGCTGATGAAGCTTATATA
                      ____________________________________________________________
consensus             GTGTGTGAGAGAGAGAGGGGGAGAGAGAGAGAGAGATTGCTAGCTGATGAAGCTTATATA
 
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JMSF049E05+           TACAGAAGAAGAAAGATGGAAAGTGATTTGAAGAAAGAACAAGGAAGAAGGGGAGCTATC
                      ____________________________________________________________
consensus             TACAGAAGAAGAAAGATGGAAAGTGATTTGAAGAAAGAACAAGGAAGAAGGGGAGCTATC