| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003J18 | Sequence | 555 | 012181 (7) | gb|ACY78680.1| | 6e-38 | calcium-dependent protein kinase 1 [Panax ginseng] | 657 | 008403 (10) | ref|XP_009627158.1| | 2e-65 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMFF013I16 | Sequence | 556 | 012181 (7) | gb|ACY78680.1| | 2e-35 | calcium-dependent protein kinase 1 [Panax ginseng] | 824 | 008403 (10) | ref|XP_009627158.1| | 2e-101 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMFF015K02 | Sequence | 615 | 012181 (7) | gb|ACY78680.1| | 3e-49 | calcium-dependent protein kinase 1 [Panax ginseng] | 634 | 008403 (10) | ref|XP_009627158.1| | 2e-64 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMFF049D16 | Sequence | 631 | 012181 (7) | gb|ACY78680.1| | 1e-43 | calcium-dependent protein kinase 1 [Panax ginseng] | 543 | 008403 (10) | ref|XP_009627158.1| | 4e-27 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMFF051E05 | Sequence | 590 | 012181 (7) | ref|XP_011086186.1| | 2e-31 | PREDICTED: calcium-dependent protein kinase-like [Sesamum indicum] | 626 | 008403 (10) | ref|XP_009627158.1| | 1e-36 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMSF029P16 | Sequence | 611 | 012181 (7) | gb|ACY78680.1| | 4e-33 | calcium-dependent protein kinase 1 [Panax ginseng] | 795 | 008403 (10) | ref|XP_009627158.1| | 6e-110 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
| JMSF048O06 | Sequence | 706 | 012181 (7) | gb|ACY78680.1| | 6e-53 | calcium-dependent protein kinase 1 [Panax ginseng] | 744 | 008403 (10) | ref|XP_009627158.1| | 2e-82 | PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF049D16+ AGCAATAATCCGATCAAGCAGCTCCCCGTCAGAGCGAAGCTCCATGACAAGGTGCAC
____________________________________________________________
consensus AGCAATAATCCGATCAAGCAGCTCCCCGTCAGAGCGAAGCTCCATGACAAGGTGCAC
. : . : . : . : . : . :
JMFF049D16+ TGACTGCCTATCCTCGAAAGCACCCTGCAANTAACACAATGTTCGGATGCCCACTCAAGT
JMFF051E05+ TGCCCACTCAAGT
JMFF015K02+ CACAATGTTCGGCTGCCCACTCAAGT
JMSF048O06+ CACAATGTTCGGCTGCCCACTCAAGT
____________________________________________________________
consensus TGACTGCCTATCCTCGAAAGCACCCTGCAANTAACACAATGTTCGGCTGCCCACTCAAGT
. : . : . : . : . : . :
JMFF049D16+ GCTGCATAATCAGAATATCCCTCTTGATATCCTCGATATCATTCTTGCTCACGAGCTTCC
JMFF051E05+ GCTGCATAATCTGAATCTCCCTCTTGATATCCTCCTTATCATTCTTGCTCACGAGCTTCC
JMFF003J18+ CCTCTTGATATCCTCCTTATCATTCTTGCTCACGAGCTTCC
JMFF015K02+ GCTGCATAATCTGAATCTCCCTCTTGATATCCTCCTTATCATTCTTGCTCACGAGCTTCC
JMSF029P16+ ATTCTTGCTCACGAGCTTCC
JMFF013I16+ CCTCCTTATCATTCTTGCTCACGAGCTTCC
JMSF048O06+ GCTGCATAATCTGAATCTCCCTCTTGATATCCTCCTTATCATTCTTGCTCACGAGCTTCC
____________________________________________________________
consensus GCTGCATAATCTGAATCTCCCTCTTGATATCCTCCTTATCATTCTTGCTCACGAGCTTCC
. : . : . : . : . : . :
JMFF049D16+ TCTTATGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMFF051E05+ TC--TAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMFF003J18+ TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMFF015K02+ TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMSF029P16+ TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMFF013I16+ TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
JMSF048O06+ TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
____________________________________________________________
consensus TCTTTAGAATCGACTTGCAAGCATAAGCCCGACGGGTGGAAATCTCAGTACACAGGTAAG
. : . : . : . : . : . :
JMFF049D16+ TCACCTCAAACTGGCCCCTCTCCAGTTATTTCCCAAGGCTGTAGTGTGCGTTAATGTCCT
JMFF051E05+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
JMFF003J18+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
JMFF015K02+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
JMSF029P16+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
JMFF013I16+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
JMSF048O06+ TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
____________________________________________________________
consensus TCACCCCAAACTGGCCCCTCCCCAGTTCTTTCCCAAGACTGTAGTGTGCCTTAATGTCCT
. : . : . : . : . : . :
JMFF049D16+ CAAAAGGCTTCCCCAATATGTTATATGGCTCAGGTCTCTGAACAGCCCTAACAGGTTGGG
JMFF051E05+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
JMFF003J18+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
JMFF015K02+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
JMSF029P16+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
JMFF013I16+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
JMSF048O06+ CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
____________________________________________________________
consensus CAAAAGGCTTCCCCAATATGTTATTTGGCTCAGGTCTCTGAACAGGCCTAACAGGTTGGG
. : . : . : . : . : . :
JMFF049D16+ GCACTGATGAGGGTTTCGCAGGGACATGGACTGGAGCATAGGTCTGGGGCTGTGGGTTAT
JMFF051E05+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
JMFF003J18+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
JMFF015K02+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
JMSF029P16+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
JMFF013I16+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
JMSF048O06+ GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
____________________________________________________________
consensus GCACTGATGAGGGTTTTGCAGGGACATGGACTGGAGCATAGGACTGGGGCTGTGGGTTAT
. : . : . : . : . : . :
JMFF049D16+ AGGGCCTTTCAGGTTGGGTATAGGTCAGGGCATGGGTAGAGGATGCCTTTTGATGGCTTT
JMFF051E05+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
JMFF003J18+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
JMFF015K02+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
JMSF029P16+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
JMFF013I16+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
JMSF048O06+ AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
____________________________________________________________
consensus AGGGCCTTTCAGGTTGGGTATAGGTTTGGGCATGGGTTGAGGATGCCTTTTGATGGCTTT
. : . : . : . : . : . :
JMFF049D16+ CAGTCACAGGTTGGTACCCAGTACCCACTCATATTCCCTGCCTATACCCATTAACATCAC
JMFF051E05+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
JMFF003J18+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
JMFF015K02+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
JMSF029P16+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
JMFF013I16+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
JMSF048O06+ CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
____________________________________________________________
consensus CAGTCACAGGTTGGTACCCAGTAGCCACTCCTCTTCCCTGCCTATACCCATTAACATCAC
. : . : . : . : . : . :
JMFF049D16+ CTTGCCTAGACTTGCTATTGCTAAAACACCCTCCCATTGAGCAGCATCAATCAAGATCTT
JMFF051E05+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
JMFF003J18+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
JMFF015K02+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
JMSF029P16+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
JMFF013I16+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
JMSF048O06+ CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
____________________________________________________________
consensus CTTGCCTAGACTTGCTCTTGCTAAAACACCCTCCCATTCTGCAGCATCAATCAAGATCTT
. : . : . : . : . : . :
JMFF049D16+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAG
JMFF051E05+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
JMFF003J18+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
JMFF015K02+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
JMSF029P16+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
JMFF013I16+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
JMSF048O06+ GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
____________________________________________________________
consensus GAAATTGAGGGCGATGGAGCAGAACTCAGATCAGATTTTGTGTAGTGAAGCTCTATGCTC
. : . : . : . : . : . :
JMFF051E05+ GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCC
JMFF003J18+ GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCC
JMFF015K02+ GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCCAGAAGAAACC
JMSF029P16+ GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCCAGAAGAAACCCTGTCGGTTGACTTCT
JMFF013I16+ GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCCAGAAGAAACC
JMSF048O06+ GGTCTGAGAGGTTTAGA--TTCTGCTCAGATCCCAGAAGAAACCCTGTCGGTTGACTTCT
____________________________________________________________
consensus GGTCTGAGAGGTTTAGATATTCTGCTCAGATCCCAGAAGAAACCCTGTCGGTTGACTTCT
. : . : . : . : . : . :
JMSF029P16+ CAAGCTCATGTGATGTAGGCTGCGTAGACCGTGTGCTGCTTTTTGTTGCT
JMSF048O06+ CAAGCTCATGTGATGTAGGCTGCGTAGACCGTGTGCTGCTTTTTGTTGCTATTTTCCCCA
____________________________________________________________
consensus CAAGCTCATGTGATGTAGGCTGCGTAGACCGTGTGCTGCTTTTTGTTGCTATTTTCCCCA