Contig 012180:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009F24Sequence625012180 (2)gb|KHN43265.1|2e-90GDSL esterase/lipase [Glycine soja]
JMSF048N20Sequence658012180 (2)ref|XP_011023543.1|1e-61PREDICTED: GDSL esterase/lipase At1g54790-like isoform X2 [Populus euphratica]723019447emb|CAN82036.1|2e-34hypothetical protein VITISV_033901 [Vitis vinifera]

Alignment

This contig is upended


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JMFN009F24+                                                       TGCCATCCCAGTTTAT
                      ____________________________________________________________
consensus                                                         TGCCATCCCAGTTTAT
 
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JMFN009F24+           GTATTCAGTACTATCATTGCACCCTTTGGCTGTGAATGTGGTTCCATTTATGACCTTAGT
                      ____________________________________________________________
consensus             GTATTCAGTACTATCATTGCACCCTTTGGCTGTGAATGTGGTTCCATTTATGACCTTAGT
 
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JMFN009F24+           CTGACCACAAGATACCCTGCTATTGTAGTTCAGTGGAGGGCCTCCAACTCCACAGCAAGC
                      ____________________________________________________________
consensus             CTGACCACAAGATACCCTGCTATTGTAGTTCAGTGGAGGGCCTCCAACTCCACAGCAAGC
 
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JMFN009F24+           CATTAGGGGCTGATCAAATCCATATCGGGAGAAATTCGCTATTAGATCAGACTTGATGGT
JMSF048N20+                              CCATATCGGGAGAAATTCGCTATTAGATCAGACTTGATGGT
                      ____________________________________________________________
consensus             CATTAGGGGCTGATCAAATCCATATCGGGAGAAATTCGCTATTAGATCAGACTTGATGGT
 
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JMFN009F24+           GAAGATATCAACATATGTGACATTTGCATCAGCATATTGGCCTTGCAACTTCTTGCAGAG
JMSF048N20+           GAAGATATCAACATATGTGACATTTGCATCAGCATATTGGCCTTGCAACTTCTTGCAGAG
                      ____________________________________________________________
consensus             GAAGATATCAACATATGTGACATTTGCATCAGCATATTGGCCTTGCAACTTCTTGCAGAG
 
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JMFN009F24+           AGTATGAAGCTGCAGGTTCAAGAGTGTAGCAGCCTGGTTATGTGAGTTCACACATCCCAA
JMSF048N20+           AGTATGAAGCTGCAGGTTCAAGAGTGTAGCAGCCTGGTTATGTGAGTTCACACATCCCAA
                      ____________________________________________________________
consensus             AGTATGAAGCTGCAGGTTCAAGAGTGTAGCAGCCTGGTTATGTGAGTTCACACATCCCAA
 
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JMFN009F24+           CCCATCCAGCTTTGAAGGATCAGTCCCGAATTTCGCAATATTCTGAGGTAAACAACCCAA
JMSF048N20+           CCCATCCAGCTTTGAAGGATCAGTCCCGAATTTCGCAATATTCCGAGGTAAGCAACCCAA
                      ____________________________________________________________
consensus             CCCATCCAGCTTTGAAGGATCAGTCCCGAATTTCGCAATATTCTGAGGTAAGCAACCCAA
 
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JMFN009F24+           AGGACCT                                                     
JMSF048N20+           AGGACCTGTGTTGTGGATCCAAAAGTTTCTTGCCCCTTGATCATACAGTTCCTGAGCAAG
                      ____________________________________________________________
consensus             AGGACCTGTGTTGTGGATCCAAAAGTTTCTTGCCCCTTGATCATACAGTTCCTGAGCAAG
 
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JMSF048N20+           TAAAACATGAAGAACCCAATAAATGGTTTCTTAAATCGCGAGCAAGATGTAAACTTTACC
                      ____________________________________________________________
consensus             TAAAACATGAAGAACCCAATAAATGGTTTCTTAAATCGCGAGCAAGATGTAAACTTTACC
 
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JMSF048N20+           TTAACCCCGTCTTCAAATTCTGAGAGAATAGTGGGAATTGAAGCAAGAATTTGATCTAAG
                      ____________________________________________________________
consensus             TTAACCCCGTCTTCAAATTCTGAGAGAATAGTGGGAATTGAAGCAAGAATTTGATCTAAG
 
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JMSF048N20+           GTCTTGGAATAGAAAGCCCCAGCAAGATCATTCTGGCCTATATCAAACATGTAAAGACCT
                      ____________________________________________________________
consensus             GTCTTGGAATAGAAAGCCCCAGCAAGATCATTCTGGCCTATATCAAACATGTAAAGACCT
 
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JMSF048N20+           TTCTGGAAAAAATCCTCATCTGGTACATACTTATCATGTTTCTTAGCTGCAAAAAGATCA
                      ____________________________________________________________
consensus             TTCTGGAAAAAATCCTCATCTGGTACATACTTATCATGTTTCTTAGCTGCAAAAAGATCA
 
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JMSF048N20+           AATGCATAAAGGGAGAGATTTATTTATCCATCAAGATAGATCTTATCAGCTAACTCTTAC
                      ____________________________________________________________
consensus             AATGCATAAAGGGAGAGATTTATTTATCCATCAAGATAGATCTTATCAGCTAACTCTTAC