| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004B04 | Sequence | 532 | 012176 (9) | ref|XP_010544377.1| | 8e-53 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like [Tarenaya hassleria | 754 | 013977 (6) | ref|XP_006491046.1| | 1e-61 | PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Citrus sin |
| JMFF045K10 | Sequence | 647 | 012176 (9) | gb|ABR13310.1| | 4e-110 | putative NAD dependent malic enzyme [Prunus dulcis] | 469 | 019171 | gb|KHN27303.1| | 2e-10 | NAD-dependent malic enzyme 59 kDa isoform, mitochondrial, partial [Glycine soja |
| JMFS048C08 | Sequence | 584 | 012176 (9) | gb|KDP28665.1| | 2e-37 | hypothetical protein JCGZ_14436 [Jatropha curcas] | |||||
| JMFS105E06 | Sequence | 625 | 012176 (9) | gb|ABR13310.1| | 3e-43 | putative NAD dependent malic enzyme [Prunus dulcis] | |||||
| JMFS112A11 | Sequence | 644 | 012176 (9) | gb|ABR13310.1| | 4e-52 | putative NAD dependent malic enzyme [Prunus dulcis] | |||||
| JMSF025G13 | Sequence | 690 | 012176 (9) | gb|ABR13310.1| | 2e-120 | putative NAD dependent malic enzyme [Prunus dulcis] | 768 | 013977 (6) | ref|XP_006445106.1| | 2e-68 | hypothetical protein CICLE_v10019380mg [Citrus clementina] gb|ESR58346.1| hypoth |
| JMSF025J07 | Sequence | 694 | 012176 (9) | gb|ABR13310.1| | 2e-120 | putative NAD dependent malic enzyme [Prunus dulcis] | 711 | 013977 (6) | ref|XP_004153716.1| | 4e-30 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like, partial [Cucumis s |
| JMSF041N11 | Sequence | 777 | 012176 (9) | gb|KDP28665.1| | 6e-100 | hypothetical protein JCGZ_14436 [Jatropha curcas] | 610 | 013977 (6) | ref|XP_004153716.1| | 1e-45 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like, partial [Cucumis s |
| JMSF048D13 | Sequence | 146 | 012176 (9) | 775 | 013977 (6) | ref|XP_004145048.1| | 8e-98 | PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like [Cucumis sativus] | |||
This contig is upended
. : . : . : . : . : . :
JMSF041N11+ GTTCCA
____________________________________________________________
consensus GTTCCA
. : . : . : . : . : . :
JMSF025G13+ TGATACCAGCTGCCGCAACATACATG
JMSF025J07+ TGATACCAGCTGCCGCAACATACATG
JMSF041N11+ ACATCAAGCATAACAGGAAGAACTCTTTGTGGATTGATACCAGCTGCCGCAACATACATG
____________________________________________________________
consensus ACATCAAGCATAACAGGAAGAACTCTTTGTGGATTGATACCAGCTGCCGCAACATACATG
. : . : . : . : . : . :
JMFF045K10+ GGTATGCCAATCCCGTGAACTCCAAGATCACCTAGACCAAGAATG
JMSF025G13+ TCAAGTTTGCCAATCGGTATGCCGATTCCCTGAACTCCAAGATCACCTAGACCAAGAATT
JMSF025J07+ TCAAGTTTGCCAATCGGTATGCCGATTCCCTGAACTCCAAGATCACCTAGACCAAGAATT
JMSF041N11+ TCAAGTTTGCCAATCGGTATGCCGATTCCCTGAACTCCAAGATCACCTAGACCAAGAATT
____________________________________________________________
consensus TCAAGTTTGCCAATCGGTATGCCGATTCCCTGAACTCCAAGATCACCTAGACCAAGAATT
. : . : . : . : . : . :
JMFF045K10+ CGACTTCCATCTGTCAGCACAATCATGTCTACCTGATCAGAAGGCCAGTTATAGATCATA
JMSF025G13+ CTACTTCCATCTGTAATGACAATCATATCTACTTGTTGAGAAGGCCAGTTATAGATCATT
JMSF025J07+ CTACTTCCATCTGTAATGACAATCATATCTACTTGTTGAGAAGGCCAGTTATAGATCATT
JMSF041N11+ CTACTTCCATCTGTAATGACAATCATATCTACTTGTTGAGAAGGCCAGTTATAGATCATT
____________________________________________________________
consensus CTACTTCCATCTGTAATGACAATCATATCTACTTGTTGAGAAGGCCAGTTATAGATCATT
. : . : . : . : . : . :
JMFF045K10+ GAGATCATCTCTCCCTTATCTTTGGCACTGAAATACATCCCACGTGGGCGTCTGAACAAC
JMSF025G13+ GACATCATCTCTCCCTTATCTTTGGCGCTAAAATACATCCCACGTGGGCGCCTGAACAAC
JMSF025J07+ GACATCATCTCTCCCTTATCTTTGGCGCTAAAATACATCCCACGTGGGCGCCTGAACAAC
JMSF041N11+ GACATCATCTCTCCCTTATCTTTGGCGCTAAAATACATCCCACGTGGGCGCCTGAACAAC
____________________________________________________________
consensus GACATCATCTCTCCCTTATCTTTGGCGCTAAAATACATCCCACGTGGGCGCCTGAACAAC
. : . : . : . : . : . :
JMFF045K10+ CCTGAGTAATTTTGGCATACCAATCCTACAGTTGGAGTGTACACAATAGGAGCAAAATCA
JMSF025G13+ CCTGAGTAGTTTTGGCATACCAATCCCACCGTTGGAGTGTATACTATAGGAGCAAAATCT
JMSF025J07+ CCTGAGTAGTTTTGGCATACCAATCCCACCGTTGGAGTGTATACTATAGGAGCAAAATCT
JMFF004B04+ CCTGAGTAGTTTTGGCATACCAATCCCACCGTTGGAGTGTATACTATAGGAGCAAAATCT
JMSF041N11+ CCTGAGTAGTTTTGGCATACCAATCCCACCGTTGGAGTGTATACTATAGGAGCAAAATCT
JMFS112A11+ T
____________________________________________________________
consensus CCTGAGTAGTTTTGGCATACCAATCCCACCGTTGGAGTGTATACTATAGGAGCAAAATCT
. : . : . : . : . : . :
JMFF045K10+ TTGATGTTATCAATAAGAACTCGGTAG-TACAATGTCTCATTTCTGTCATGAAGTCGGTT
JMSF025G13+ TTAATATTATCAATAAGAACTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
JMSF025J07+ TTAATATTATCAATAAGAACTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
JMFF004B04+ TTAATATTATCAATAAGAACTCGGTAGNTACAGTGTCTCATTCCTGTCATGTAATCTATT
JMSF041N11+ TTAATATTATCAATAAGAACTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
JMFS112A11+ TTAATATTATCAATAAGAACTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
JMFS105E06+ CTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
____________________________________________________________
consensus TTAATATTATCAATAAGAACTCGGTAG-TACAGTGTCTCATTCCTGTCATGTAATCTATT
. : . : . : . : . : . :
JMFF045K10+ TAAGATCCTCCATTTCGCCAGTGACACATCACCCTCCGAATGACCGAGAGTTTTTTTTTC
JMSF025G13+ CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
JMSF025J07+ CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
JMFF004B04+ CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
JMSF041N11+ CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTA-TTTTTTC
JMFS112A11+ CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
JMFS105E06+ CAAGATCCTCCATTTTGCTAATGATACAATACTCAAGGACAACCAGAGAGTATTTTTTTC
JMFS048C08+ GATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
____________________________________________________________
consensus CAAGATCCTCCATTTTGCTAATGATACACTACTCTCTGGTTGTCCTTGAGTATTTTTTTC
. : . : . : . : . : . :
JMFF045K10+ AAGCGAGTGAAATGACTCCATGAAACGTGAATATTGATGTTCGAATGATATAACACGAGG
JMSF025G13+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMSF025J07+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMFF004B04+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMSF041N11+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMFS112A11+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMFS105E06+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
JMFS048C08+ AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
____________________________________________________________
consensus AAGAGATCGAAATGATTCCATGAAACGAGAATATTGCTGTTGAAAAGATATAACACGTGG
. : . : . : . : . : . :
JMFF045K10+ TGGGAGAAGACCACGAAGGCCCAGTCGATCTCGTTCAGTTATCGGGAAACCTGTATCCTT
JMSF025G13+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMSF025J07+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMFF004B04+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMSF041N11+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMFS112A11+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMFS105E06+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
JMFS048C08+ TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
____________________________________________________________
consensus TGGAAGTAGACCACGAAGTCCTAGTCGATCTCTTTCAGTCAAAGGGAAGCCTGTATCCTT
. : . : . : . : . : . :
JMFF045K10+ GTTGAACCAGGGATCATGGAGAATATCAGCGCCGCGCTTGTGGACGATACAGGGTCCAGG
JMSF025G13+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMSF025J07+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMFF004B04+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMSF041N11+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMFS112A11+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMFS105E06+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
JMFS048C08+ ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
____________________________________________________________
consensus ATTGAACCAAGGATCATGGAGAATATCAGCACCGCGCTTGTGGACAATACACGGTCCCGG
. : . : . : . : . : . :
JMFF045K10+ GATCGCGGTGG
JMSF025G13+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMSF025J07+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMFF004B04+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMSF041N11+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMFS112A11+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMFS105E06+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
JMFS048C08+ AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
____________________________________________________________
consensus AATCGCCGTGGAGTACCACCGCGAGCGGCGGCGGAGACTTGACACCGCAGATCGAGCCGC
. : . : . : . : . : . :
JMSF025G13+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMSF025J07+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMFF004B04+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMSF041N11+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMFS112A11+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMFS105E06+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
JMFS048C08+ TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
____________________________________________________________
consensus TCTCCACATTGTGTGAGTTAATTGTGGTCCAAACACTCTCTCGCTCACCTCTGCTCTTGT
. : . : . : . : . : . :
JMSF025G13+ GGTG
JMSF025J07+ GGT
JMFF004B04+ GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCC
JMSF041N11+ GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCCAGT
JMFS112A11+ GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCCAGTAGCCAGTA
JMFS105E06+ GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCCAGTAGCCAGTA
JMFS048C08+ GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCCAGTAGCCAGTA
____________________________________________________________
consensus GGTGGTTTCAGATCCCTTCTCAGCACCTCATTTTTATACTTCTGTAGCCAGTAGCCAGTA
. : . : . : . : . : . :
JMFS112A11+ GCCAGTAGCAGTAGGTATAAATTCTCCCTGA-TTTTTTTTTTTTAACTTTTTCCAGTTTA
JMFS105E06+ GCCAGTAGCAGTAGGTATAAATTCTCCCTGA-TTTTTTTTTTTTAACTTTTTCCAGTTTA
JMFS048C08+ GCCAGTAGCAGTAGGTATAAATTCTCCCTGATTTTTTTTTTTTTAACTTTTTCCAGTTTA
JMSF048D13+ TTTTTTTTTTAACTTTTTCCAGTTTA
____________________________________________________________
consensus GCCAGTAGCAGTAGGTATAAATTCTCCCTGA-TTTTTTTTTTTTAACTTTTTCCAGTTTA
. : . : . : . : . : . :
JMFS112A11+ CTATTATTACTGCGTGTATCTCTGACTGTTGCAGTCTTGCTGGGTTGCTGCAGTTGAGAC
JMFS105E06+ CTATTATTACTGCGTGTATCTCTGACTGTTGCAGTCTTGCTGGGTTGCTGCAGTTGAGAC
JMFS048C08+ CTATTATTACTGCGTGTATCTCTGACTGTTGCAGTCTTGCTGGGTTGCTGCAGTTGAGAC
JMSF048D13+ CTATTATTACTGCGTGTATCTCTGACTGTTGCAGTCTTGCTGGGTTGCTGCAGTTGAGAC
____________________________________________________________
consensus CTATTATTACTGCGTGTATCTCTGACTGTTGCAGTCTTGCTGGGTTGCTGCAGTTGAGAC
. : . : . : . : . : . :
JMFS112A11+ GACGACGACTTGCGGGCAAGAGAGAGAGACTTGCGGGCAAGAGAG
JMFS105E06+ GACGACGACTTGCGGGCAAGAGAGAGAGACTTGCGGGCAAGAGAG
JMFS048C08+ GACGACGACTTGCGGGCAAGAGAGAGAGACTTGCGGGCAAGAGAG
JMSF048D13+ GACGACGACTTGCGGGCAAGAGAGAGAGACTTGCGGGCAAGAGAGAGAGAATTTCGGGCC
____________________________________________________________
consensus GACGACGACTTGCGGGCAAGAGAGAGAGACTTGCGGGCAAGAGAGAGAGAATTTCGGGCC