| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002L10 | Sequence | 437 | 012172 (6) | ref|XP_010267679.1| | 4e-26 | PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Nelumbo nucifera] | 709 | 012172 (6) | ref|XP_007219361.1| | 2e-62 | hypothetical protein PRUPE_ppa019499mg [Prunus persica] gb|EMJ20560.1| hypotheti |
| JMSF032O17 | Sequence | 680 | 012172 (6) | ref|XP_007015118.1| | 2e-82 | Caffeic acid 3-O-methyltransferase 1 isoform 2 [Theobroma cacao] gb|EOY32737.1| | 688 | 012172 (6) | ref|XP_011468886.1| | 5e-91 | PREDICTED: LOW QUALITY PROTEIN: caffeic acid 3-O-methyltransferase-like [Fragar |
| JMSF047K15 | Sequence | 684 | 012172 (6) | ref|XP_007015118.1| | 2e-56 | Caffeic acid 3-O-methyltransferase 1 isoform 2 [Theobroma cacao] gb|EOY32737.1| | 822 | 012172 (6) | ref|XP_011468886.1| | 1e-99 | PREDICTED: LOW QUALITY PROTEIN: caffeic acid 3-O-methyltransferase-like [Fragar |
This contig is upended
. : . : . : . : . : . :
rJMSF002L10- GCAAAATCCGATTGCTCCAGAAATATACAAATAGTAGGAAAATAATTAAAGAG
rJMSF032O17- AAGAG
rJMSF047K15- AAATCCGATTGCTCCAGAAATATACAAATAGTAGGAAAATAATTAAAGAG
____________________________________________________________
consensus GCAAAATCCGATTGCTCCAGAAATATACAAATAGTAGGAAAATAATTAAAGAG
. : . : . : . : . : . :
rJMSF002L10- CGCAGCTGACATGCATGCATGCATATATGCATCCATCATCCATCGCATTGCAGTGCTTAT
rJMSF032O17- CGCAGCTGACATGCATGCATGCATATATGCATCCATCATCCATCGCATTGCAGTGCTTAT
rJMSF047K15- CGCAGCTGACATGCATGCATGCATATATGCATCCATCATCCATCGCATTGCAGTGCTTAT
____________________________________________________________
consensus CGCAGCTGACATGCATGCATGCATATATGCATCCATCATCCATCGCATTGCAGTGCTTAT
. : . : . : . : . : . :
rJMSF002L10- TTAAAGTTTAAACCATTCATGCAATGCAATATAATCTACTTGTGGAACTCAATGACCCAA
rJMSF032O17- TTAAAGTTTAAACCATTCATGCAATGCAATATAATCTACTTGTGGAACTCAATGACCCAA
rJMSF047K15- TTAAAGTTTAAACCATTCATGCAATGCAATATAATCTACTTGTGGAACTCAATGACCCAA
____________________________________________________________
consensus TTAAAGTTTAAACCATTCATGCAATGCAATATAATCTACTTGTGGAACTCAATGACCCAA
. : . : . : . : . : . :
rJMSF002L10- AAGTTACAGGCGAAACATTCCAGTGTTATGCCTTTGAATCCAGACCCCATTGCCAAGGCT
rJMSF032O17- AAGTTACAGGCGAAACATTCCAGTGTTATGCCTTTGAATCCAGACCCCATTGCCAAGGCT
rJMSF047K15- AAGTTACAGGCGAAACATTCCAGTGTTATGCCTTTGAATCCAGACCCCATTGCCAAGGCT
____________________________________________________________
consensus AAGTTACAGGCGAAACATTCCAGTGTTATGCCTTTGAATCCAGACCCCATTGCCAAGGCT
. : . : . : . : . : . :
rJMSF002L10- CGAAACTGCTGTTCAGATCGCTCCTTTCCGCCAGGGTTTTGAGTCAACATAATCAGATCC
rJMSF032O17- CGAAACTGCTGTTCAGATCGCTCCTTTCCGCCAGGGTTTTGAGTCAACATAATCAGATCC
rJMSF047K15- CGAAACTGCTGTTCAGATCGCTCCTTTCCGCCAGGGTTTTGAGTCAACATAATCAGATCC
____________________________________________________________
consensus CGAAACTGCTGTTCAGATCGCTCCTTTCCGCCAGGGTTTTGAGTCAACATAATCAGATCC
. : . : . : . : . : . :
rJMSF002L10- GTTTGGGTGACGCTTATTACAGAGGCACTGTTCTCAGGCTTTGGTGGAAGAATCCCTTCT
rJMSF032O17- GTTTGGGTGACGCTTATTACAGAGGCACTGTTCTCAGGCTTTGGTGGAAGAATCCCTTCT
rJMSF047K15- GTTTGGGTGACGCTTATTACAGAGGCACTGTTCTCAGGCTTTGGTGGAAGAATCCCTTCT
____________________________________________________________
consensus GTTTGGGTGACGCTTATTACAGAGGCACTGTTCTCAGGCTTTGGTGGAAGAATCCCTTCT
. : . : . : . : . : . :
rJMSF002L10- ACTGCTATCACCTTTCCGTTCTCTGGTAATGCCTCGTAGCAGTTCTTCAGAAGCTTCAGG
rJMSF032O17- ACTGCTATCACCTTTCCGTTCTCTGGTAATGCCTCGTAGCAGTTCTTCAGAAGCTTCAGG
rJMSF047K15- ACTGCTATCACCTTTCCGTTCTCTGGTAATGCCTCGTAGCAGTTCTTCAGAAGCTTCAGG
____________________________________________________________
consensus ACTGCTATCACCTTTCCGTTCTCTGGTAATGCCTCGTAGCAGTTCTTCAGAAGCTTCAGG
. : . : . : . : . : . :
rJMSF002L10- CAATGCCTATCACTCCAGTCATGAAGTATCCACTTCATGAATATAGCATCTCCTTTTGGT
rJMSF032O17- CAATGCCTATCACTCCAGTCATGAAGTATCCACTTCATGAATATAGCATCTCCTTTTGGT
rJMSF047K15- CAATGCCTATCACTCCAGTCATGAAGTATCCACTTCATGAATATAGCATCTCCTTTTGGT
____________________________________________________________
consensus CAATGCCTATCACTCCAGTCATGAAGTATCCACTTCATGAATATAGCATCTCCTTTTGGT
. : . : . : . : . : . :
rJMSF002L10- ACACTTTCAAACATATCTCCCCCAACATGTTCAACCC
rJMSF032O17- ACACTTTCAAACATATCTCCCCCAACATGTTCAACCCTAGGATAGGCAGGTGCGGTATGG
rJMSF047K15- ACACTTTCAAACATATCTCCCCCAACATGTTCAACCCTAGGATAGGCAGGTGCGGTATGG
____________________________________________________________
consensus ACACTTTCAAACATATCTCCCCCAACATGTTCAACCCTAGGATAGGCAGGTGCGGTATGG
. : . : . : . : . : . :
rJMSF032O17- ATAACATGCGGCAAATCAAAATTGATCCCCTTTATCCCTGGATATTTTTCAGTAATTATA
rJMSF047K15- ATAACATGCGGCAAATCAAAATTGATCCCCTTTATCCCTGGATATTTTTCAGTAATTATA
JMSF032O17+ TCAGTAATTATA
____________________________________________________________
consensus ATAACATGCGGCAAATCAAAATTGATCCCCTTTATCCCTGGATATTTTTCAGTAATTATA
. : . : . : . : . : . :
rJMSF032O17- CTGAGGGTGACACCAAGCCCACCACCAACATCAACCAAAGTATTGATGTGTTCTAATCCT
rJMSF047K15- CTGAGGGTGACACCAAGCCCACCACCAACATCAACCAAAGTATTGATGTGTTCTAATCCT
JMSF032O17+ CTGAGGGTGACACCAAGCCCACCACCAACATCAACCAAAGTATTGATGTGTTCTAATCCT
____________________________________________________________
consensus CTGAGGGTGACACCAAGCCCACCACCAACATCAACCAAAGTATTGATGTGTTCTAATCCT
. : . : . : . : . : . :
rJMSF032O17- TTGTACTTCTCCAGGATGCTTTTGATTACGACACTTGTGTGGTTCAACATTGCCTTGTTG
rJMSF047K15- TTGTACTTCTCCAGGATGCTTTTGATTACGACACTTGTGTGGTTCAACATTGCCTTGTTG
JMSF032O17+ TTGTACTTCTCCAGGATGCTTTTGATTACGACACTTGTGTGGTTCAACATTGCCTTGTTG
____________________________________________________________
consensus TTGTACTTCTCCAGGATGCTTTTGATTACGACACTTGTGTGGTTCAACATTGCCTTGTTG
. : . : . : . : . : . :
rJMSF032O17- AATACATGGTTGAACCTAGGA
rJMSF047K15- AATACATGGTTGAACCTAGGATCTTTCCCCGGATACTCGAATGCATGTGTTCCCATGGAC
JMSF032O17+ AATACATGGTTGAACCTAGGATCTTTCCCCGGATACTCGAATGCATGTGTT-CCATGGAC
JMSF047K15+ CCATGGAC
____________________________________________________________
consensus AATACATGGTTGAACCTAGGATCTTTCCCCGGATACTCGAATGCATGTGTTCCCATGGAC
. : . : . : . : . : . :
rJMSF047K15- CCTGTCAAAGGGAACTCCTCCTTCAGGTACAGCGTCTTTTAATNCATAC
JMSF032O17+ CCTGTCAAAGGGAACTCCTCCTTCAAGTACAGCGTCTTTTAATTCATACCAGCTGTGGAT
JMSF047K15+ CCTGTCAAAGGGAACTCCTCCTTCAAGTACAGCGTCTTTTAATTCATACCAGCTGTGGAT
____________________________________________________________
consensus CCTGTCAAAGGGAACTCCTCCTTCAAGTACAGCGTCTTTTAATTCATACCAGCTGTGGAT
. : . : . : . : . : . :
JMSF032O17+ AAAGACTTTGTCTTGAAGTAGTGCTAAAAGGGGCCCCAGCGACGCACCATCTTGGTTGCG
JMSF047K15+ AAAGACTTTGTCTTGAAGTAGTGCTAAAAGGGGCCCCAGCGACGCACCATCTTGGTTGCG
____________________________________________________________
consensus AAAGACTTTGTCTTGAAGTAGTGCTAAAAGGGGCCCCAGCGACGCACCATCTTGGTTGCG
. : . : . : . : . : . :
JMSF032O17+ GATAAAGTATTTGGCCACCGGTGCAAGGCCGTAAAGTCTTGTAACATCTTCATCTCCGGC
JMSF002L10+ CCGGC
JMSF047K15+ GATAAAGTATTTGGCCACCGGTGCAAGGCCGTAAAGTCTTGTAACATCTTCATCTCCGGC
____________________________________________________________
consensus GATAAAGTATTTGGCCACCGGTGCAAGGCCGTAAAGTCTTGTAACATCTTCATCTCCGGC
. : . : . : . : . : . :
JMSF032O17+ GGCGGCGGCGGCAACAACTGAGCAGGTGAGGAGATTGTGGGTGGCCAGGAGGCGGAGCAT
JMSF002L10+ GGCGGCGGCGGCAACAACTGAGCAGGTGAGGAGATTGTGGGTGGCCAGGAGGCGGAGCAT
JMSF047K15+ GGCGGCGGCGGCAACAACTGAGCAGGTGAGGAGATTGTGGGTGGCCAGGAGGCGGAGCAT
____________________________________________________________
consensus GGCGGCGGCGGCAACAACTGAGCAGGTGAGGAGATTGTGGGTGGCCAGGAGGCGGAGCAT
. : . : . : . : . : . :
JMSF032O17+ CCGATCCAGCATGGCCGGAGCATCTGGGTTTTTGGTGGGCATTTTTGAAGCGATCTGAGA
JMSF002L10+ CCGATCCAGCATGGCCGGAGCATCTGGGTTTTTGGTGGGCATTTTTGAAGCGATCTGAGA
JMSF047K15+ CCGATCCAGCATGGCCGGAGCATCTGGGTTTTTGGTGGGCATTTTTGAAGCGATCTGAGA
____________________________________________________________
consensus CCGATCCAGCATGGCCGGAGCATCTGGGTTTTTGGTGGGCATTTTTGAAGCGATCTGAGA
. : . : . : . : . : . :
JMSF032O17+ AGGTGATAGTTGAGCACCAGATCCGGCACCGTTTATGATCTCAAACACATCCAGTTCCAC
JMSF002L10+ AGGTGATAGTTGAGCACCAGATCCGGCACCGTTTATGATCTCAAACACATCCAGTTCCAC
JMSF047K15+ AGGTGATAGTTGAGCACCAGATCCGGCACCGTTTATGATCTCAAACACATCCAGTTCCAC
____________________________________________________________
consensus AGGTGATAGTTGAGCACCAGATCCGGCACCGTTTATGATCTCAAACACATCCAGTTCCAC
. : . : . : . : . : . :
JMSF032O17+ CGCCGCCTTCAACACCATTGGCAACGATGCACTAGTCACCAGCTGGACTGCATATGCGCA
JMSF002L10+ CGCCGCCTTCAACACCATTGGCAACGATGCACTAGTCACCAGCTGGACTGCATATGCGCA
JMSF047K15+ CGCCGCCTTCAACACCATTGGCAACGATGCACTAGTCACCAGCTGGACTGCATATGCGCA
____________________________________________________________
consensus CGCCGCCTTCAACACCATTGGCAACGATGCACTAGTCACCAGCTGGACTGCATATGCGCA
. : . : . : . : . : . :
JMSF032O17+ CTCTTCTTCTTCTTCTTCTTCTATCTCACTCTTATGCTCTTGCTGGGTCGACGCCATTTT
JMSF002L10+ CTCTTCTTCTTCTTCTTCTTCTATCTCACTCTTATGCTCTTGCTGGGTCGACGCCATTTT
JMSF047K15+ CTCTTCTTCTTCTTCTTCTTCTATCTCACTCTTATGCTCTTGCTGGGTCGACGCCATTTT
____________________________________________________________
consensus CTCTTCTTCTTCTTCTTCTTCTATCTCACTCTTATGCTCTTGCTGGGTCGACGCCATTTT
. : . : . : . : . : . :
JMSF032O17+ CATTCTTC
JMSF002L10+ CATTCTTCAATTCCACTTAATTGCCTTTTATTTCTTTATTATATATGTGTACTACGAGAA
JMSF047K15+ CATTCTTCAATTCCACTTAATTGCCTTTTATTTCTTTATTATATATGTGTACTACGAGAA
____________________________________________________________
consensus CATTCTTCAATTCCACTTAATTGCCTTTTATTTCTTTATTATATATGTGTACTACGAGAA
. : . : . : . : . : . :
JMSF002L10+ GAAATGATAGTGGAGATACTATACTATTTGGAAAGCTGTCTCATTTTGCACACACTAAAA
JMSF047K15+ GAAATGATAGTGGAGATACTATACTATTTGGAAAGCTGTCTCATTTTGCACACACTAAAA
____________________________________________________________
consensus GAAATGATAGTGGAGATACTATACTATTTGGAAAGCTGTCTCATTTTGCACACACTAAAA
. : . : . : . : . : . :
JMSF002L10+ AGTGAATGCC
JMSF047K15+ AGTGAATGCCTACACTAAAACACTGCTACTAGCCGGATTTTTAACATAAAGAAAGACTCC
____________________________________________________________
consensus AGTGAATGCCTACACTAAAACACTGCTACTAGCCGGATTTTTAACATAAAGAAAGACTCC