Contig 012167:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046P17-                                              CATAAAATCTTTCAAGGAAAAAAA
                      ____________________________________________________________
consensus                                                 CATAAAATCTTTCAAGGAAAAAAA
 
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rJMSF046P17-          AAACAAAAAGAAACTCAAAGGTTTATCTCCGATTAGCAAGAGCAAGAGTAGTTTAAACCG
                      ____________________________________________________________
consensus             AAACAAAAAGAAACTCAAAGGTTTATCTCCGATTAGCAAGAGCAAGAGTAGTTTAAACCG
 
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rJMSF046P17-          GAGGCTTTCCTCATCTTTGTACTATTTAAAATTTTTCTATTCCTACGTGCTTCCGCATAT
                      ____________________________________________________________
consensus             GAGGCTTTCCTCATCTTTGTACTATTTAAAATTTTTCTATTCCTACGTGCTTCCGCATAT
 
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rJMSF046P17-          CTGGCCTTAGGATCAACCCACAATCTCTGAAGATCGTACGGCTGGGGAGAGTCCACCGTA
                      ____________________________________________________________
consensus             CTGGCCTTAGGATCAACCCACAATCTCTGAAGATCGTACGGCTGGGGAGAGTCCACCGTA
 
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rJMSF046P17-          CCGCCAGAAATCTGCTCAGCTGGGAGGTTGAGATCCGGAATTCCAAGTGGGCCTACACCA
                      ____________________________________________________________
consensus             CCGCCAGAAATCTGCTCAGCTGGGAGGTTGAGATCCGGAATTCCAAGTGGGCCTACACCA
 
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rJMSF046P17-          TGATTCGCCATGCCTAACCCATAANATGAATGTCTTTGGTCCAGTTGGCCCAATTCGCAC
                      ____________________________________________________________
consensus             TGATTCGCCATGCCTAACCCATAANATGAATGTCTTTGGTCCAGTTGGCCCAATTCGCAC
 
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rJMSF046P17-          ATAAATGTTTGGGCCGTTTGGCATGCCCGCAATCCACTCCTCATCTCCAACGCAATAGGC
                      ____________________________________________________________
consensus             ATAAATGTTTGGGCCGTTTGGCATGCCCGCAATCCACTCCTCATCTCCAACGCAATAGGC
 
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rJMSF046P17-          TGTTGCTCTTGTCGATTATATTGGGCCAAGTTTGACTGCCCAAAACTAGTCACGCTTCTC
                      ____________________________________________________________
consensus             TGTTGCTCTTGTCGATTATATTGGGCCAAGTTTGACTGCCCAAAACTAGTCACGCTTCTC
 
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rJMSF046P17-          CTAGTCATTTCCATTTTAGGTTCCTCTCTTTCGTGGGATGTCCTTAATAGCTCTCCTTCT
JMSF046P17+                                            TGGGATGTCCTTAATAGCTCTCCTTCT
                      ____________________________________________________________
consensus             CTAGTCATTTCCATTTTAGGTTCCTCTCTTTCGTGGGATGTCCTTAATAGCTCTCCTTCT
 
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rJMSF046P17-          TTCATTGCTTTCAGCTTCANATTGTAAGTTTTTAGGCTGTTGTAGTAAATCATCACATTC
JMSF046P17+           TTCATTGCTTTCAGCTTCAGATTGTAAGTTTTTAGGCTGTTGTAGTAAATCATCACATTC
                      ____________________________________________________________
consensus             TTCATTGCTTTCAGCTTCAGATTGTAAGTTTTTAGGCTGTTGTAGTAAATCATCACATTC
 
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rJMSF046P17-          TCCAATTCCTGCGTCAGTGTTTCTTNGCTCTG                            
JMSF046P17+           TCCAATTCCTGCGTCAGTGTTTCTTTGCTCTGCTTTAACTCTTCTATGTTACTCAGCCAC
                      ____________________________________________________________
consensus             TCCAATTCCTGCGTCAGTGTTTCTTTGCTCTGCTTTAACTCTTCTATGTTACTCAGCCAC
 
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JMSF020L10+                      CTTCTTCTTTGTGCGCTTGCGAGAAGAGCGTTTTTGTTTCTCATCAGAT
JMSF046P17+           TCTTCTCTACTCTTCTTCTTTGTGCGCTTGCGAGAAGAGCGTTTTTGTTTCTCATCAGAT
                      ____________________________________________________________
consensus             TCTTCTCTACTCTTCTTCTTTGTGCGCTTGCGAGAAGAGCGTTTTTGTTTCTCATCAGAT
 
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JMSF020L10+           TCGGTTAGAGATAACGAGAGAGGCGTGGCGGGACTGGAGGCCGCCTGCGGCTTTTTGACT
JMSF046P17+           TCGGTTAGAGATAACGAGAGAGGCGTGGCGGGACTGGAGGCCGCCTGCGGCTTTTTGACT
                      ____________________________________________________________
consensus             TCGGTTAGAGATAACGAGAGAGGCGTGGCGGGACTGGAGGCCGCCTGCGGCTTTTTGACT
 
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JMSF020L10+           TTTCGTTCCGCCGTCTGGTTTTCATCGTCGCCGTGAGAAACTCTCGGCGGCGAACTGCGA
JMSF046P17+           TTTCGTTCCGCCGTCTGGTTTTCATCGTCGCCGTGAGAAACTCTCGGCGGCG-ACTGCGA
                      ____________________________________________________________
consensus             TTTCGTTCCGCCGTCTGGTTTTCATCGTCGCCGTGAGAAACTCTCGGCGGCGAACTGCGA
 
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JMSF020L10+           TGGAGAGTCGTCGACGACGGCGCAGCTGGAAACCGCGAAGACGCGCTTAGATCTCTTCCT
JMSF046P17+           TGGAGAGTCGTCGACGACGGCGCAGCTGGAAACCGCGAAGACGCGCTTAGATCTCTTCCT
                      ____________________________________________________________
consensus             TGGAGAGTCGTCGACGACGGCGCAGCTGGAAACCGCGAAGACGCGCTTAGATCTCTTCCT
 
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JMSF020L10+           TTTACCGCTCCANCCAACCAGCAACTTGGAGATAGATTGAAACTCAGATTGCTGAATTAT
JMSF046P17+           TTTACCGCTCCAACCAACCAGCAACTTGGAGATAGATTGAAACTCAGATTGCTGAATTAT
                      ____________________________________________________________
consensus             TTTACCGCTCCAACCAACCAGCAACTTGGAGATAGATTGAAACTCAGATTGCTGAATTAT
 
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JMSF020L10+           GTCCTTGAGATTCTCTAAGATAATGCAGACTTCGATCTCATCTCCCTC            
JMSF046P17+           GTCCTTGAGATTCTCTAAGATAATGCAGACTTCGATCTCATCTCCCTCGAAAACAGGAGA
                      ____________________________________________________________
consensus             GTCCTTGAGATTCTCTAAGATAATGCAGACTTCGATCTCATCTCCCTCGAAAACAGGAGA
 
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JMSF046P17+           CAAAGCTGTTTCCCTGCTTGTACTCTGTAACGTCATCTGCTCCTCTTCAGACTTGCAGAG
                      ____________________________________________________________
consensus             CAAAGCTGTTTCCCTGCTTGTACTCTGTAACGTCATCTGCTCCTCTTCAGACTTGCAGAG
 
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JMSF046P17+           AAGAAGGATAAAATTGTGGAAAGAGAGAAGATTGGGTATGCAGAGGCAGAGAGACAGCGG
                      ____________________________________________________________
consensus             AAGAAGGATAAAATTGTGGAAAGAGAGAAGATTGGGTATGCAGAGGCAGAGAGACAGCGG
 
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JMSF046P17+           GCGTAGAGGGGTTGAAGGAGGGTTGGCTTTTTATGGGAAAATCCATGGAAAGCGTATAGG
                      ____________________________________________________________
consensus             GCGTAGAGGGGTTGAAGGAGGGTTGGCTTTTTATGGGAAAATCCATGGAAAGCGTATAGG
 
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JMSF046P17+           TGTTGACACGTGGCCCTTTTAACTACAAATTGGGGGTGTCTAGGGTTTATACTAACTTTT
                      ____________________________________________________________
consensus             TGTTGACACGTGGCCCTTTTAACTACAAATTGGGGGTGTCTAGGGTTTATACTAACTTTT