Contig 012162:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046I20+                                TATGACAAGGAAAATGTTTTCCTTTTGGTGATGGGGCAG
                      ____________________________________________________________
consensus                                  TATGACAAGGAAAATGTTTTCCTTTTGGTGATGGGGCAG
 
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JMFS004B12+                                                              CAGCAGAAC
JMSF046I20+           GAGAACTAAAAGCAGAAGTGACGTTACTGACAGCTGTTGGAGCCTCAGCAGCAGCAGAAC
                      ____________________________________________________________
consensus             GAGAACTAAAAGCAGAAGTGACGTTACTGACAGCTGTTGGAGCCTCAGCAGCAGCAGAAC
 
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JMFS004B12+           GGTTGCGCCAAAGTTGCCAAAAGCGCACGTCATCATCATAAAAGCTGACCTGCTTAACAC
JMSF046I20+           GGTTGCGCCAAAGTTGCCAAAAGCGCACGTCATCATCATAAAAGCTGACCTGCTTAACAC
                      ____________________________________________________________
consensus             GGTTGCGCCAAAGTTGCCAAAAGCGCACGTCATCATCATAAAAGCTGACCTGCTTAACAC
 
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JMFS004B12+           TCCCACCTCGTATGGCTTCTGTTGGTTTCCCTCTAGACTCTGATTCACCCTCGGCAAGCT
JMFS052G10+                       TGGCTTCTGTTGGTTTCCCTCTAGACTCTGATTCACCCTCGGCAAGCT
JMSF046I20+           TCCCACCTCGTATGGCTTCTGTTGGTTTCCCTCTAGACTCTGATTCACCCTCGGCAAGCT
                      ____________________________________________________________
consensus             TCCCACCTCGTATGGCTTCTGTTGGTTTCCCTCTAGACTCTGATTCACCCTCGGCAAGCT
 
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JMFS004B12+           TTTCGAGCTTTG-CCCCGACCAAACGCCTCTCATCAACACCACCAGCCTTCAGCTCATAA
JMFS052G10+           TTTCGAGCTTTGTCCCCGACCAAACGCCTCTCATCATCTCCACCAGCCTTTAGCTCATAA
JMSF046I20+           TTTCGAGCTTTG-CCCCGACCAAACGCCTCTCATCAACACCACCAGCCTTCAGCTCATAA
                      ____________________________________________________________
consensus             TTTCGAGCTTTG-CCCCGACCAAACGCCTCTCATCAACACCACCAGCCTTCAGCTCATAA
 
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JMFS004B12+           ATGACCTGGCGGTGCTCCCAATTCCAAACGGAAACGTGATCCGATGCATCCGCAGTCACG
JMFS052G10+           ATGACCTGGCGGTGCTCCCAATTCCAAACGGAAACGTGATCCGATGCATCCGCAGTCTCG
JMSF046I20+           ATGACCTGGCGGTGCTCCCAATTCCAAACGGAAACGTGATCCGATGCATCCGCAGTCACG
                      ____________________________________________________________
consensus             ATGACCTGGCGGTGCTCCCAATTCCAAACGGAAACGTGATCCGATGCATCCGCAGTCACG
 
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JMFS004B12+           ATCCACGGATGCGTCGGGTGCATATGAATCTTCACTATCTTATCATTTGTCGGCCGGAAA
JMFS052G10+           ATCCACGGATGCGTCGGGTGCATATGAATCTTCACTATCTTATCATTTGTTGGCCGGAAA
JMSF046I20+           ATCCACGGATGCGTCGGGTGCATATGAATCTTCACTATCTTATCATTTGTCGGCCGGAAA
                      ____________________________________________________________
consensus             ATCCACGGATGCGTCGGGTGCATATGAATCTTCACTATCTTATCATTTGTCGGCCGGAAA
 
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JMFS004B12+           GCCCTTAACCGCAGCATTTTTCAACTTTCAACTTTCCAGAAGTGCAATTGAAGAGCC-AC
JMFS052G10+           GCCCTTAACCGCAACATTTTTCAACTTTCAACTTTCCAGAAGTGCAATTGAAGAGCCTTC
JMSF046I20+           GCCCTTAACCGCAGCATTTTTCAACTTTCAACTTTCCAGAAGTGCAATTGAAGAGCC-AC
                      ____________________________________________________________
consensus             GCCCTTAACCGCAGCATTTTTCAACTTTCAACTTTCCAGAAGTGCAATTGAAGAGCC-AC
 
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JMFS004B12+           TCGGCGATGGATCTGACGATGAAATACGAATTTGTATACTTAA-ATGTAACCTCTACTCT
JMFS052G10+           TCGGCGATGGATCTGACGATGAAATACGAATTTGTATACTTAATATGTAACCTCTACTCT
JMSF046I20+           TCGGCGATGGATCTGACGATGAAATACGAATTTGTATACTTAA-ATGTAACCTCTACTCT
                      ____________________________________________________________
consensus             TCGGCGATGGATCTGACGATGAAATACGAATTTGTATACTTAA-ATGTAACCTCTACTCT
 
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JMFS004B12+           AAAATGTCAGTAACATTCAGTGAAGAATCTGATCGTGCTACCGATA---AGAAACATCAA
JMFS052G10+           AATATGTCAGTAAGATTCAGTGAAGAATCTGATCGTGCTACCGATATAGAAACACTCTAA
JMSF046I20+           AAAATGTCAGTAAGATTCAGTGAAGAATCTGATCGTGCTACCGATA---AGAAACATCAA
                      ____________________________________________________________
consensus             AAAATGTCAGTAAGATTCAGTGAAGAATCTGATCGTGCTACCGATA---AGAAACATCAA
 
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JMFS004B12+           AATTTTCCGACCATTCCAATCAAACACCTTACGCCAGCTGGGAGTTGAAGAATGAGGAAC
JMFS052G10+           ATTTTCTGTTCCATTCCAATCAAACACCTTACGCCATCTGGGAGTTGAAGAATGAGGAAC
JMSF046I20+           AATTTTCCGACCATTCCAATCAAACACCTTACGCCAGCTGGGAGTTGAAGAATGAGGAAC
                      ____________________________________________________________
consensus             AATTTTCCGACCATTCCAATCAAACACCTTACGCCAGCTGGGAGTTGAAGAATGAGGAAC
 
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JMFS004B12+           TGGTCACTGTAAAGTGTAAGA                                       
JMFS052G10+           TGGTCACTGTAAAGTGTAAGA                                       
JMSF046I20+           TGGTCACTGTAAAGTGTAAGAATTAAGAAATGGCAAGCACTTTGAACAAGACGAGTTACC
                      ____________________________________________________________
consensus             TGGTCACTGTAAAGTGTAAGAATTAAGAAATGGCAAGCACTTTGAACAAGACGAGTTACC