Contig 012160:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046H17Sequence789012160 (2)gb|KHN09677.1|3e-84Myb-related protein 308 [Glycine soja]682012160 (2)gb|KHN31220.1|8e-42Myb-related protein 308 [Glycine soja]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046H17- ACTGTGCATCCCTGCTTCAGCGTTTATGCTGCTCG
                      ____________________________________________________________
consensus ACTGTGCATCCCTGCTTCAGCGTTTATGCTGCTCG
 
. : . : . : . : . : . :
rJMSF046H17- TCGTCATCATTTTGTCACAGTTACACGCATTACTATTCTGAAACCCTAAATTGTAACACA
                      ____________________________________________________________
consensus TCGTCATCATTTTGTCACAGTTACACGCATTACTATTCTGAAACCCTAAATTGTAACACA
 
. : . : . : . : . : . :
rJMSF046H17- AACACACTGCTCGCTGACTGAAGAAGAGATGGTTTTTACGGGTTTGATCGTTAAACTCTT
                      ____________________________________________________________
consensus AACACACTGCTCGCTGACTGAAGAAGAGATGGTTTTTACGGGTTTGATCGTTAAACTCTT
 
. : . : . : . : . : . :
rJMSF046H17- TCCCGGCGAGTTTCGTCGTCGACGGCGGCGCCGCCGGCGGTTGGGGAAGACTGATGGACA
JMSF046H17+ TGATGGACA
                      ____________________________________________________________
consensus TCCCGGCGAGTTTCGTCGTCGACGGCGGCGCCGCCGGCGGTTGGGGAAGACTGATGGACA
 
. : . : . : . : . : . :
rJMSF046H17- GCTCCAGGTTGATTAGCGGAGCCGCCGCCGCCGCCGGGTGCAATACTATTTCCTCGGATG
JMSF046H17+ GCTCCAGGTTGATTAGCGGAGCCGCCGCCGCCGCCGGGTGCAATACTATTTCCTCGGATG
                      ____________________________________________________________
consensus GCTCCAGGTTGATTAGCGGAGCCGCCGCCGCCGCCGGGTGCAATACTATTTCCTCGGATG
 
. : . : . : . : . : . :
rJMSF046H17- ACAAGCCGCTGCTGCTGTTGGAATCCTCGGTGGTCGTCGAAGTGTTGTTCGAATTCTCGG
JMSF046H17+ ACAAGCCGCTGCTGCTGTTGGAATCCTCGGTGGTCGTCGAAGTGTTGTTCGAATTCTCGG
                      ____________________________________________________________
consensus ACAAGCCGCTGCTGCTGTTGGAATCCTCGGTGGTCGTCGAAGTGTTGTTCGAATTCTCGG
 
. : . : . : . : . : . :
rJMSF046H17- CCTTTGTGTTTCTCATCCACGGAAGAAACCCAGCTGCAGCAGTCTCATGTTGTTGTTGGT
JMSF046H17+ CCTTTGTGTTTNTCATCCACGGAAGAAACCCAGCTGCAGCAGTCTCATGTTGTTGTTGGT
                      ____________________________________________________________
consensus CCTTTGTGTTTCTCATCCACGGAAGAAACCCAGCTGCAGCAGTCTCATGTTGTTGTTGGT
 
. : . : . : . : . : . :
rJMSF046H17- CTAGGTTCTTGGCGGACGAGGAGAGAGCGAGGGGGACAACTGCGGCGGAAGGGGAGGCAG
JMSF046H17+ CTAGGTTCTTGGCGGACGAGGAGAGAGCGAGGGGGACAACTGCGGCGGAAGGGGAGGCAG
                      ____________________________________________________________
consensus CTAGGTTCTTGGCGGACGAGGAGAGAGCGAGGGGGACAACTGCGGCGGAAGGGGAGGCAG
 
. : . : . : . : . : . :
rJMSF046H17- CGTCCGCCGCCGCAGTGTTCTGAGCTGAACTTACAGCGCGGTGTGTCTGCGGATCGATCC
JMSF046H17+ CGTCCGCCGCCGCAGTGTTCTGAGCTGAACTTACAGCGCGGTGTGTCTGCGGATCGATCC
                      ____________________________________________________________
consensus CGTCCGCCGCCGCAGTGTTCTGAGCTGAACTTACAGCGCGGTGTGTCTGCGGATCGATCC
 
. : . : . : . : . : . :
rJMSF046H17- CACGGCTGAGAAGCTTCCGTTTAATGTGAGTGTTCCAGTAATTCTTGATCTCGTTATCCG
JMSF046H17+ CACGGCTGAGAAGCTTCCGTTTAATGTGAGTGTTCCAGTAATTCTTGATCTCGTTATCCG
                      ____________________________________________________________
consensus CACGGCTGAGAAGCTTCCGTTTAATGTGAGTGTTCCAGTAATTCTTGATCTCGTTATCCG
 
. : . : . : . : . : . :
rJMSF046H17- TTCTTCCCGGCAACCGTGCCGCTATCAATGACCATTTGTTTCCAAGTAAGCTATGAAGGT
JMSF046H17+ TTCTTCCCGGCAACCGTGCCGCTATCAATGACCATTTGTTTCCAAGTAAGCTATGAAGGT
                      ____________________________________________________________
consensus TTCTTCCCGGCAACCGTGCCGCTATCAATGACCATTTGTTTCCAAGTAAGCTATGAAGGT
 
. : . : . : . : . : . :
rJMSF046H17- TGATGATGAGTTCGTCTTCTTCCTCAGTAAAGTTGCCTC
JMSF046H17+ TGATGATGAGTTCGTCTTCTTCCTCAGTAAAGTTGCCTCGTTTAAGATCGGGTCTCAGAT
                      ____________________________________________________________
consensus TGATGATGAGTTCGTCTTCTTCCTCAGTAAAGTTGCCTCGTTTAAGATCGGGTCTCAGAT
 
. : . : . : . : . : . :
JMSF046H17+ AGTTTATCCATCGCAGCCTGCAACTCTTCCCGCATCTAAGCAACCCGGCAGCTTTGGGGA
                      ____________________________________________________________
consensus AGTTTATCCATCGCAGCCTGCAACTCTTCCCGCATCTAAGCAACCCGGCAGCTTTGGGGA
 
. : . : . : . : . : . :
JMSF046H17+ GAGTCCGCCAACAACCTTCGCCGTGTTTTTTGATATACCTAATAAGCCTCTCGTCTTCTT
                      ____________________________________________________________
consensus GAGTCCGCCAACAACCTTCGCCGTGTTTTTTGATATACCTAATAAGCCTCTCGTCTTCTT
 
. : . : . : . : . : . :
JMSF046H17+ CCTTGGTCCACGCTCCTTTGTTGGTGTGTTCCTTCTCACAACAAGGAGATCTGCCCATCT
                      ____________________________________________________________
consensus CCTTGGTCCACGCTCCTTTGTTGGTGTGTTCCTTCTCACAACAAGGAGATCTGCCCATCT
 
. : . : . : . : . : . :
JMSF046H17+ TTACTTCACTCTACCTGTAACCTGTTTACGCTTTCCGAGGATCCCACGATACAATTAAGG
                      ____________________________________________________________
consensus TTACTTCACTCTACCTGTAACCTGTTTACGCTTTCCGAGGATCCCACGATACAATTAAGG
 
. : . : . : . : . : . :
JMSF046H17+ TTTTGGTTAAGAAAACAGAGGGAGAGAGAGAGAGAAGTGATGAATGATGTTTTAAGGACC
                      ____________________________________________________________
consensus TTTTGGTTAAGAAAACAGAGGGAGAGAGAGAGAGAAGTGATGAATGATGTTTTAAGGACC