Contig 012159:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046E21Sequence755012159 (2)ref|XP_009757060.1|2e-120PREDICTED: probable sulfate transporter 3.5 isoform X3 [Nicotiana sylvestris]596004388 (2)ref|XP_009613802.1|3e-53PREDICTED: probable sulfate transporter 3.5 isoform X2 [Nicotiana tomentosiform
JMSF048H19Sequence696012159 (2)ref|XP_009613802.1|9e-108PREDICTED: probable sulfate transporter 3.5 isoform X2 [Nicotiana tomentosiform463004388 (2)ref|XP_009613802.1|6e-39PREDICTED: probable sulfate transporter 3.5 isoform X2 [Nicotiana tomentosiform

Alignment

This contig is upended


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JMSF046E21+                                    CTGAAAACGGTACGCAAAACGGACACCATATCAGT
                      ____________________________________________________________
consensus                                      CTGAAAACGGTACGCAAAACGGACACCATATCAGT
 
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JMSF048H19+                                  CAAGCATGCCCTTTAGCTGCTGCAAGCATATAAGCAT
JMSF046E21+           ATGTGTTGTGAAGTGCTGCAACCCAAGCATGCCCTTTAGCTGCTGCAAGCATATAAGCAT
                      ____________________________________________________________
consensus             ATGTGTTGTGAAGTGCTGCAACCCAAGCATGCCCTTTAGCTGCTGCAAGCATATAAGCAT
 
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JMSF048H19+           GGCGGTCCCTCCCATAAACCCAGTAATGGTTGAATGCGATAAAAAATCCACTATTATTCC
JMSF046E21+           GGCGGTCCCTCCCATAAACCCAGTAATGGTTGAATGCGATAAAAAATCCACTATTATTCC
                      ____________________________________________________________
consensus             GGCGGTCCCTCCCATAAACCCAGTAATGGTTGAATGCGATAAAAAATCCACTATTATTCC
 
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JMSF048H19+           CAGTCTTAAAATACCCAAAGTTGTCTGAATCAGACCGGAGAAAAGGGTGGCGGTGAACAC
JMSF046E21+           CAGTCTTAAAATACCCAAAGTTGTCTGAATCAGACCGGAGAAAAGGGTGGCGGTGAACAC
                      ____________________________________________________________
consensus             CAGTCTTAAAATACCCAAAGTTGTCTGAATCAGACCGGAGAAAAGGGTGGCGGTGAACAC
 
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JMSF048H19+           CAAACTAAGATAAAGTTCCAAGTTTTCTTGTGGGTTCACGGCTTCTTCAATGGTGGCGGC
JMSF046E21+           CAAACTAAGATAAAGTTCCAAGTTTTCTTGTGGGTTCACGGCTTCTTCAATGGTGGCGGC
                      ____________________________________________________________
consensus             CAAACTAAGATAAAGTTCCAAGTTTTCTTGTGGGTTCACGGCTTCTTCAATGGTGGCGGC
 
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JMSF048H19+           TATGATCAACGAGCACGCCGCCACCGTCCCAACTGCCAAGTGCTTTGAGCTTCCGAAAAC
JMSF046E21+           TATGATCAACGAGCACGCCGCCACCGTCCCAACTGCCAAGTGCTTTGAGCTTCCGAAAAC
                      ____________________________________________________________
consensus             TATGATCAACGAGCACGCCGCCACCGTCCCAACTGCCAAGTGCTTTGAGCTTCCGAAAAC
 
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JMSF048H19+           TGCGTAGATTAACGGCGGAACAAAGCTCGAATAGAGTCCGATGATCGGAGGGAGGTTGGC
JMSF046E21+           TGCGTAGATTAACGGCGGAACAAAGCTCGAATACAGTCCGATGATCGGAGGGAGGTTGGC
                      ____________________________________________________________
consensus             TGCGTAGATTAACGGCGGAACAAAGCTCGAATAGAGTCCGATGATCGGAGGGAGGTTGGC
 
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JMSF048H19+           GAGCTTAGCGTAGCTGATTCCCTGCGGGATGGCGAGGCTGGCGATGGTGATTCCGGCGAG
JMSF046E21+           GAGCTTAGCGTAGCTGATTCCCTGCGGGATGGCGAGGCTGGCGATGGTGATTCCGGCGAG
                      ____________________________________________________________
consensus             GAGCTTAGCGTAGCTGATTCCCTGCGGGATGGCGAGGCTGGCGATGGTGATTCCGGCGAG
 
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JMSF048H19+           AAGATCGTACTTGAAGAGGTGCAGATTGTAGTTTGGTAGCCACTGAAAAATGGGAACGAA
JMSF046E21+           AAGATCGTACTTGAAGAGGTGCAGATTGTAGTTTGGTAGCCACTGAAAAATGGGAACGAA
                      ____________________________________________________________
consensus             AAGATCGTACTTGAAGAGGTGCAGATTGTAGTTTGGTAGCCACTGAAAAATGGGAACGAA
 
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JMSF048H19+           GTATTTGATTCCCATAGTGACCCTGCGTGAAAATGGCTCGTTCTTGAACTCACGAAATGG
JMSF046E21+           GTATTTGATTCCCATAGTGACCCTGCGTGAAAATGGCTCGTTCTTGAACTCACGAAATGG
                      ____________________________________________________________
consensus             GTATTTGATTCCCATAGTGACCCTGCGTGAAAATGGCTCGTTCTTGAACTCACGAAATGG
 
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JMSF048H19+           ATCGTCTGGGAAAAGGGTTTCCTTCACTTTGGAGTTGACAACAGTTTTGAAGCTCCGTGG
JMSF046E21+           ATCGTCTGGGAAAAGGGTTTCCTTCACTTTGGAGTTGACAACAGTTTTGAAGCTCCGTGG
                      ____________________________________________________________
consensus             ATCGTCTGGGAAAAGGGTTTCCTTCACTTTGGAGTTGACAACAGTTTTGAAGCTCCGTGG
 
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JMSF048H19+           CTCGGCGAAGTTCACCGCCGGCCGGGCTTGCAATTGGTCAGTCTCGGTATTCGTCATCTT
JMSF046E21+           CTCGGCGAAGTTCACCGCCGGCCGGGCTTGCAATTGGTCAGTCTCGGTATTCGTCATCTT
                      ____________________________________________________________
consensus             CTCGGCGAAGTTCACCGCCGGCCGGGCTTGCAATTGGTCAGTCTCGGTATTCGTCATCTT
 
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JMSF048H19+           ATTGGCTACTACTTAGTTGGAAGAGGAAGCTAATAAGGAGGAGTGTTTAGGGGG      
JMSF046E21+           ATTGGCTACTACTTAGTTGGAAGAGGAAGCTAATAAGGAAGAGTGTTTACGGGGGAGCTC
                      ____________________________________________________________
consensus             ATTGGCTACTACTTAGTTGGAAGAGGAAGCTAATAAGGAGGAGTGTTTAGGGGGGAGCTC