| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017M10 | Sequence | 547 | 012158 (13) | ref|XP_002297860.1| | 3e-88 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | 104 | 012158 (13) | |||
| JMFF048M19 | Sequence | 474 | 012158 (13) | ref|XP_002297860.1| | 4e-74 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | 228 | 012158 (13) | |||
| JMFN004M21 | Sequence | 639 | 012158 (13) | ref|XP_002297860.1| | 6e-101 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | |||||
| JMFN004N10 | Sequence | 526 | 012158 (13) | ref|XP_011086848.1| | 3e-96 | PREDICTED: NAC transcription factor 25 [Sesamum indicum] | |||||
| JMFN006M19 | Sequence | 627 | 012158 (13) | ref|XP_002297860.1| | 2e-100 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | |||||
| JMFN020I04 | Sequence | 596 | 012158 (13) | ref|XP_002297860.1| | 2e-100 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | |||||
| JMFN028D11 | Sequence | 541 | 012158 (13) | ref|XP_011086848.1| | 7e-66 | PREDICTED: NAC transcription factor 25 [Sesamum indicum] | |||||
| JMFN031H16 | Sequence | 232 | 012158 (13) | gb|AGT01909.1| | 9e-27 | NAC transcription factor [Camellia sinensis] | |||||
| JMFN039M18 | Sequence | 604 | 012158 (13) | ref|XP_002297860.1| | 1e-96 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | |||||
| JMSF046A16 | Sequence | 623 | 012158 (13) | ref|XP_002297860.1| | 9e-100 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | |||||
| JMSF046O08 | Sequence | 619 | 012158 (13) | ref|XP_002297860.1| | 2e-99 | no apical meristem family protein [Populus trichocarpa] gb|EEE82665.1| no apical | 110 | 019436 | |||
This contig is upended
. : . : . : . : . : . :
rJMFF017M10- AGAGA
rJMFF048M19- GGAGTACAGAACCAAAAGAGA
____________________________________________________________
consensus GGAGTACAGAACCAAAAGAGA
. : . : . : . : . : . :
rJMFF017M10- AGAGTGTTGTATTGTTTGTGTTTTGCTCTTCATAGTACCACCATTGATGCCGTGTTTTGC
rJMFF048M19- AGAGTGTTGTATTGTTTGTGTTTTGCTCTTCATAGTACCACCATTGATGCCGTGTTTTGC
____________________________________________________________
consensus AGAGTGTTGTATTGTTTGTGTTTTGCTCTTCATAGTACCACCATTGATGCCGTGTTTTGC
. : . : . : . : . : . :
rJMFF017M10- TCANGTTTTTTTTGTTTTTTTNGTTT
rJMFF048M19- TCAGGTTTTTTTTTTTTTTTTGGTTTCTTGGAAAAAAGTTGGCAAAGGTTACATTACTGA
____________________________________________________________
consensus TCAGGTTTTTTTTTTTTTTTTGGTTTCTTGGAAAAAAGTTGGCAAAGGTTACATTACTGA
. : . : . : . : . : . :
rJMFF048M19- TCTGGAAATTAATACGCTAAGAAAAAAAAAAGGGGAGTTCTAGTCCTAAGGTTTTGTTCT
JMFN028D11+ CTAGTCCTAAGGTTTTGTTCT
____________________________________________________________
consensus TCTGGAAATTAATACGCTAAGAAAAAAAAAAGGGGAGTTCTAGTCCTAAGGTTTTGTTCT
. : . : . : . : . : . :
rJMFF048M19- AAAAGTGGTGAAACTATTGCAGCAGCT
JMFN028D11+ AAAAGTGGTGAAACTATTGCAGCAGCTGCTGCTCTCTTCATGATCATCTGTTTTGTCGTT
____________________________________________________________
consensus AAAAGTGGTGAAACTATTGCAGCAGCTGCTGCTCTCTTCATGATCATCTGTTTTGTCGTT
. : . : . : . : . : . :
JMFN028D11+ ACAAGAAGCCTCTGTGACTCCACTGGAGCCTGAGGATGATGAAGCTGGAGCCAGGTTCAA
____________________________________________________________
consensus ACAAGAAGCCTCTGTGACTCCACTGGAGCCTGAGGATGATGAAGCTGGAGCCAGGTTCAA
. : . : . : . : . : . :
JMFN028D11+ ATCAGCCCTCTCCCTCGCCAAGAAGTCGTAGAAAACCGGTTTGCTGTTGTTCTTTAAGCC
____________________________________________________________
consensus ATCAGCCCTCTCCCTCGCCAAGAAGTCGTAGAAAACCGGTTTGCTGTTGTTCTTTAAGCC
. : . : . : . : . : . :
JMFN028D11+ CGCAGCTCTGTTGTCGGTGATGGCCTCGGTCTGGGTCTGAGCCGGGGTGTTTTCGTCTTA
JMFN004M21+ CAGCTCTGTTGTCGGTGATGGCCTCGGTCTGGGTCTGAGCCGGGGTGTNTTCGTCTTC
JMFN006M19+ GATGGCCTCGGTCTGGGTCTGAGCCGGGGTGTNTTCGTCTTC
JMFN020I04+ TTTTCGTCTTC
JMFN039M18+ GAGCCGGGGTGTTNTCGTCTTC
JMSF046O08+ TCTGAGCCGGGGTGTTTTCGTCTTC
JMSF046A16+ TGAGCCGGGGNGTTTTCGTCTTC
____________________________________________________________
consensus CGCAGCTCTGTTGTCGGTGATGGCCTCGGTCTGGGTCTGAGCCGGGGTGTTTTCGTCTTC
. : . : . : . : . : . :
JMFN028D11+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFN004N10+ CTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFN004M21+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFN006M19+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFN020I04+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFN039M18+ ATTCTTTGCCCCTC-TTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMSF046O08+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
JMFF017M10+ TGAGGCAG
JMSF046A16+ ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
____________________________________________________________
consensus ATTCTTTGCCCCTCTTTTCTTCAAGAATATGCGGCACAACACCCAATTCTCCTGAGGCAG
. : . : . : . : . : . :
JMFN028D11+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFN004N10+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFN004M21+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFN006M19+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFN020I04+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFN039M18+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMSF046O08+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMFF017M10+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
JMSF046A16+ GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
____________________________________________________________
consensus GGATTGAGCATTGGTGAGGCGATATTCGTGCATGATCCAATCGGTTCGGGTGCCTTTCGG
. : . : . : . : . : . :
JMFN028D11+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFN004N10+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFN004M21+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFN006M19+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFN020I04+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFN039M18+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMSF046O08+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFF017M10+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMFF048M19+ TGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
JMSF046A16+ GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
____________________________________________________________
consensus GGGCTTGCCTTTGTAGAAAACCAGAGTTTTCTTCATGCCAACAAGGTGGCGGTGGCCTTT
. : . : . : . : . : . :
JMFN028D11+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFN004N10+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFN004M21+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFN006M19+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFN020I04+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFN039M18+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMSF046O08+ GGAGCTCACAATCTACTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFF017M10+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMFF048M19+ GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
JMSF046A16+ GGAGCTCACAATNTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
____________________________________________________________
consensus GGAGCTCACAATCTGCTTGTCCAAACCGGTGGCCTTCCAGTAGCCGGAGCCGGTGGCTCT
. : . : . : . : . : . :
JMFN028D11+ GTTTGACCTGTTGCAGTTAGGATACTTCACCTCCCTGGTG
JMFN004N10+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFN004M21+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFN006M19+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFN020I04+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFN039M18+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMSF046O08+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFF017M10+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMFF048M19+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
JMSF046A16+ GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
____________________________________________________________
consensus GTTTGACCTGTTGCCATTAGGATACTTCACCTCCCTGGTGCTAAAGAAATACCTCTCCTG
. : . : . : . : . : . :
JMFN004N10+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFN031H16+ GGGATCAGATTTGCAGAGATCAGCCTCCGGGATGAT
JMFN004M21+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFN006M19+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFN020I04+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFN039M18+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMSF046O08+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFF017M10+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMFF048M19+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
JMSF046A16+ CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
____________________________________________________________
consensus CTCCAAATCACCTGGCAAATCCCAGGGATCAGATTTGCAGATATCAACCTCCGGGATGAT
. : . : . : . : . : . :
JMFN004N10+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFN031H16+ GGAAGCCGGGAGGGGACACCTCAGAGCCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFN004M21+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFN006M19+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFN020I04+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFN039M18+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMSF046O08+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFF017M10+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMFF048M19+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
JMSF046A16+ GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
____________________________________________________________
consensus GGAAGCCGGGAGGGGACACCTCAAAACCTTACACTTGAGATACTGAACCACCAGCTCCTC
. : . : . : . : . : . :
JMFN004N10+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFN031H16+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFN004M21+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFN006M19+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFN020I04+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFN039M18+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMSF046O08+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFF017M10+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMFF048M19+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
JMSF046A16+ ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
____________________________________________________________
consensus ATCCGTGGGGTGGAACCGAAACCCCGGCGGCAGCCTCAGCACACCATTCTTCACAAAACT
. : . : . : . : . : . :
JMFN004N10+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFN031H16+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFN004M21+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFN006M19+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFN020I04+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFN039M18+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMSF046O08+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFF017M10+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMFF048M19+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
JMSF046A16+ CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
____________________________________________________________
consensus CAACTTCTCCATCACCACCAACAAAATTTGCAGAAAAAGCTAAGCTTTTTATAGAATCTT
. : . : . : . : . : . :
JMFN004N10+ GAAC
JMFN031H16+ GAACAGTTGAGCTTGG
JMFN004M21+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAG
JMFN006M19+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGA
JMFN020I04+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGA
JMFN039M18+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAA
JMSF046O08+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGATGATGGG
JMFF017M10+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGATGATGGG
JMFF048M19+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGATGATGGG
JMSF046A16+ GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGATGATGGGTATGGGCC
____________________________________________________________
consensus GAACAGTTGAGCTTGGAGTAGAGAACAAAAGGAAGAAGAAGAAGATGATGGGTATGGGCC