Contig 012156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025A10Sequence614012156 (6)emb|CDP18716.1|3e-37unnamed protein product [Coffea canephora]777012156 (6)ref|XP_006348945.1|400PREDICTED: uncharacterized protein LOC102598279 [Solanum tuberosum]
JMSF045P20Sequence613012156 (6)emb|CDP18716.1|1e-36unnamed protein product [Coffea canephora]663012156 (6)ref|XP_009758499.1|338PREDICTED: uncharacterized protein LOC104211161 [Nicotiana sylvestris]
JMSF046H04Sequence694012156 (6)emb|CDP18716.1|3e-59unnamed protein product [Coffea canephora]765012156 (6)ref|XP_009602930.1|3e-138PREDICTED: uncharacterized protein LOC104097994 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF045P20-                                         CCTTTTCATATACAAACTACCAATAGTGA
rJMSF025A10-                                         CCTTTTCATATACAAACTACCAATAGTGA
                      ____________________________________________________________
consensus                                            CCTTTTCATATACAAACTACCAATAGTGA
 
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rJMSF045P20-          CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
rJMSF025A10-          CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
rJMSF046H04-                                                           AACTTCTACTT
                      ____________________________________________________________
consensus             CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
 
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rJMSF045P20-          TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
rJMSF025A10-          TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
rJMSF046H04-          TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
                      ____________________________________________________________
consensus             TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
 
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rJMSF045P20-          GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
rJMSF025A10-          GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
rJMSF046H04-          GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
                      ____________________________________________________________
consensus             GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
 
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rJMSF045P20-          GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
rJMSF025A10-          GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
rJMSF046H04-          GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
                      ____________________________________________________________
consensus             GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
 
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rJMSF045P20-          TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
rJMSF025A10-          TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
rJMSF046H04-          TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
                      ____________________________________________________________
consensus             TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
 
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rJMSF045P20-          ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
rJMSF025A10-          ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
rJMSF046H04-          ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
                      ____________________________________________________________
consensus             ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
 
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rJMSF045P20-          GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
rJMSF025A10-          GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
rJMSF046H04-          GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
                      ____________________________________________________________
consensus             GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
 
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rJMSF045P20-          CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
rJMSF025A10-          CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
rJMSF046H04-          CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
                      ____________________________________________________________
consensus             CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
 
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rJMSF045P20-          TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
rJMSF025A10-          TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
rJMSF046H04-          TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
JMSF046H04+                TGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
                      ____________________________________________________________
consensus             TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
 
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rJMSF045P20-          AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
rJMSF025A10-          AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
rJMSF046H04-          AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
JMSF046H04+           AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
JMSF025A10+                                                         CAGCTCAGCCCAAT
JMSF045P20+                                                          AGCTCAGCCCAAT
                      ____________________________________________________________
consensus             AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
 
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rJMSF045P20-          CAATGTACCTTATATCCGGCACAGCGATATGTGG                          
rJMSF025A10-          CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
rJMSF046H04-          CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF046H04+           CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF025A10+           CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF045P20+           CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
                      ____________________________________________________________
consensus             CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
 
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rJMSF025A10-          AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
rJMSF046H04-          AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF046H04+           AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF025A10+           AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF045P20+           AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
                      ____________________________________________________________
consensus             AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
 
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rJMSF025A10-          TGTCTGCCCACCACATGTTGGTTAAAAA                                
rJMSF046H04-          TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF046H04+           TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF025A10+           TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF045P20+           TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
                      ____________________________________________________________
consensus             TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
 
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rJMSF046H04-          CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAA                          
JMSF046H04+           CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
JMSF025A10+           CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
JMSF045P20+           CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
                      ____________________________________________________________
consensus             CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
 
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JMSF046H04+           CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
JMSF025A10+           CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
JMSF045P20+           CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
                      ____________________________________________________________
consensus             CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
 
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JMSF046H04+           CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
JMSF025A10+           CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
JMSF045P20+           CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
                      ____________________________________________________________
consensus             CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
 
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JMSF046H04+           TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
JMSF025A10+           TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
JMSF045P20+           TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
                      ____________________________________________________________
consensus             TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
 
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JMSF046H04+           GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
JMSF025A10+           GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
JMSF045P20+           GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
                      ____________________________________________________________
consensus             GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
 
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JMSF046H04+           AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
JMSF025A10+           AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
JMSF045P20+           AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
                      ____________________________________________________________
consensus             AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
 
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JMSF046H04+           TGTCAAAATCTTCATCACCACCACATTCTTGGACAACC                      
JMSF025A10+           TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC
JMSF045P20+           TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC
                      ____________________________________________________________
consensus             TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC