Contig 012156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025A10Sequence614012156 (6)emb|CDP18716.1|3e-37unnamed protein product [Coffea canephora]777012156 (6)ref|XP_006348945.1|400PREDICTED: uncharacterized protein LOC102598279 [Solanum tuberosum]
JMSF045P20Sequence613012156 (6)emb|CDP18716.1|1e-36unnamed protein product [Coffea canephora]663012156 (6)ref|XP_009758499.1|338PREDICTED: uncharacterized protein LOC104211161 [Nicotiana sylvestris]
JMSF046H04Sequence694012156 (6)emb|CDP18716.1|3e-59unnamed protein product [Coffea canephora]765012156 (6)ref|XP_009602930.1|3e-138PREDICTED: uncharacterized protein LOC104097994 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045P20- CCTTTTCATATACAAACTACCAATAGTGA
rJMSF025A10- CCTTTTCATATACAAACTACCAATAGTGA
                      ____________________________________________________________
consensus CCTTTTCATATACAAACTACCAATAGTGA
 
. : . : . : . : . : . :
rJMSF045P20- CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
rJMSF025A10- CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
rJMSF046H04- AACTTCTACTT
                      ____________________________________________________________
consensus CAAAAATGATAGTTGTTAATGAGATGATTTTTCTTAATCGCCATAAACAAACTTCTACTT
 
. : . : . : . : . : . :
rJMSF045P20- TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
rJMSF025A10- TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
rJMSF046H04- TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
                      ____________________________________________________________
consensus TCTAATTTGGTTTATCCTTTACACATTGCTCACAATCAGGAAGGAGTTCATGACTGATTG
 
. : . : . : . : . : . :
rJMSF045P20- GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
rJMSF025A10- GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
rJMSF046H04- GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
                      ____________________________________________________________
consensus GCTCCACTCCTTTCACCGACCACTGATACACAAGTGCCCTTTCAATTACCCTGACCTGCT
 
. : . : . : . : . : . :
rJMSF045P20- GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
rJMSF025A10- GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
rJMSF046H04- GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
                      ____________________________________________________________
consensus GTACAATGAAAGGCTCCTCAGCAAGACTCAATGGTTCAGTCAAAATAGTTAGGAAGCCAT
 
. : . : . : . : . : . :
rJMSF045P20- TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
rJMSF025A10- TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
rJMSF046H04- TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
                      ____________________________________________________________
consensus TTCTGTTTCCATACACAATGTCTGTGAAAGGCCGATCACCCACCATGATAAGTTTTGAGG
 
. : . : . : . : . : . :
rJMSF045P20- ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
rJMSF025A10- ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
rJMSF046H04- ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
                      ____________________________________________________________
consensus ATTCGCAACCAAACTGCCTTTCAATTTCTTCAGCTGTTCCAGCTGGTTTCTTCACCCTAT
 
. : . : . : . : . : . :
rJMSF045P20- GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
rJMSF025A10- GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
rJMSF046H04- GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
                      ____________________________________________________________
consensus GTCTGATTACTTTAATTCCAATTGCACGCTCAAGGATCTTTGCATTTCTACCATCAGGGT
 
. : . : . : . : . : . :
rJMSF045P20- CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
rJMSF025A10- CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
rJMSF046H04- CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
                      ____________________________________________________________
consensus CATATTCAAATAGTCCTGCAGAGTTACTGAAAACCGCAATGTTGTTGCCAAACAGAGCTT
 
. : . : . : . : . : . :
rJMSF045P20- TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
rJMSF025A10- TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
rJMSF046H04- TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
JMSF046H04+ TGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
                      ____________________________________________________________
consensus TGCACTGCTCTATGGACGATCTCAGAGGCGGCCACAAGCGCAAAGAGTAAGGAACAGTTA
 
. : . : . : . : . : . :
rJMSF045P20- AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
rJMSF025A10- AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
rJMSF046H04- AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
JMSF046H04+ AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
JMSF025A10+ CAGCTCAGCCCAAT
JMSF045P20+ AGCTCAGCCCAAT
                      ____________________________________________________________
consensus AAGTATTGTCCTTATCGAAGACCACACCTTCAAAGCCCCTTCTCTTCAGCTCAGCCCAAT
 
. : . : . : . : . : . :
rJMSF045P20- CAATGTACCTTATATCCGGCACAGCGATATGTGG
rJMSF025A10- CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
rJMSF046H04- CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF046H04+ CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF025A10+ CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
JMSF045P20+ CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
                      ____________________________________________________________
consensus CAATGTACCTTATATCCGGCACAGCGATATGTGGGATCACCAAATGCTTGTTTTTAGCAA
 
. : . : . : . : . : . :
rJMSF025A10- AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
rJMSF046H04- AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF046H04+ AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF025A10+ AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
JMSF045P20+ AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
                      ____________________________________________________________
consensus AAATCCCCAGAGAAGAAGTAAGACCCTCCACGTTAATCCTCTGCCCCAATGCAGCCTTCA
 
. : . : . : . : . : . :
rJMSF025A10- TGTCTGCCCACCACATGTTGGTTAAAAA
rJMSF046H04- TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF046H04+ TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF025A10+ TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
JMSF045P20+ TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
                      ____________________________________________________________
consensus TGTCTGCCCACCACATGTTTGTTAAAAAGACCAAAGGATTCTCGAATCGCCTTTCCGGTT
 
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rJMSF046H04- CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAA
JMSF046H04+ CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
JMSF025A10+ CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
JMSF045P20+ CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
                      ____________________________________________________________
consensus CTCCGTCGCCGTCTTCGTAATAATCTTGAGGAAACACCGGGTTTTCTCGATCCGGGTCTT
 
. : . : . : . : . : . :
JMSF046H04+ CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
JMSF025A10+ CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
JMSF045P20+ CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
                      ____________________________________________________________
consensus CGGGGTTTCGGGGGTGCTTTTGCTTCTCGTGCTCGGTGCTGCAGCTGTGCGTGGTGGCGG
 
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JMSF046H04+ CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
JMSF025A10+ CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
JMSF045P20+ CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
                      ____________________________________________________________
consensus CGGCGCTGAGAGTGAGGCGGCTCAGTCGGATGGGGAAAGGAAGAGAGTGGGGGGGAGAGG
 
. : . : . : . : . : . :
JMSF046H04+ TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
JMSF025A10+ TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
JMSF045P20+ TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
                      ____________________________________________________________
consensus TAAAGCGGCTAGGAACTGGACAGTAGCAGCAGTTCTGCCATGGCGTAACAGTGGTAGAAT
 
. : . : . : . : . : . :
JMSF046H04+ GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
JMSF025A10+ GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
JMSF045P20+ GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
                      ____________________________________________________________
consensus GCATAGTCAAACTAAGAAAGGTTTGAATTTATAAAGCATGGATTCAAGAAGTGAATTGTG
 
. : . : . : . : . : . :
JMSF046H04+ AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
JMSF025A10+ AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
JMSF045P20+ AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
                      ____________________________________________________________
consensus AATCTGCAAAATGGGGAGTTTTGGGAGGAGTGGGGGTTGGGTGTGGCTTTCAAAACAATA
 
. : . : . : . : . : . :
JMSF046H04+ TGTCAAAATCTTCATCACCACCACATTCTTGGACAACC
JMSF025A10+ TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC
JMSF045P20+ TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC
                      ____________________________________________________________
consensus TGTCAAAATCTTCATCACCACCACATTCTTGGACAACCAATTGGCAATTGGTAAGAGAGC