Contig 012155:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034O20-                                          AATTTTGGAGTCATGAAGAGTTAACCCT
                      ____________________________________________________________
consensus                                             AATTTTGGAGTCATGAAGAGTTAACCCT
 
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rJMSF034O20-          TGATTTCACATAAACAAGCATATTGACAAACNTTTGCTAGTTGACAAATGAAAGTTCAAG
rJMSF045K21-                          AGCATATTGACAAACATTTGCTAGTTGACAAATGAAAGTTCAAG
                      ____________________________________________________________
consensus             TGATTTCACATAAACAAGCATATTGACAAACATTTGCTAGTTGACAAATGAAAGTTCAAG
 
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rJMSF034O20-          AAAACCTTTGATGCTCTCAAAATCNTGGCTTTCCAACTTCCAAGTAACAGGAGATTGATG
rJMSF045K21-          AAAACCTTTGATGCTCTCAAAATCATGGCTTTCCAACTTCCAAGTAACAGGAGATTGATG
                      ____________________________________________________________
consensus             AAAACCTTTGATGCTCTCAAAATCATGGCTTTCCAACTTCCAAGTAACAGGAGATTGATG
 
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rJMSF034O20-          CATTTCTAGTCCTTTTAATGCTAGAAGACACTTCAAACTTCTTATTACTTCAATTCANTG
rJMSF045K21-          CATTTCTAGTCCTTTTAATGCTAGAAGACACTTCAAACTTCTTATTACTTCAATTCAATG
                      ____________________________________________________________
consensus             CATTTCTAGTCCTTTTAATGCTAGAAGACACTTCAAACTTCTTATTACTTCAATTCAATG
 
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rJMSF034O20-          GAGGAGTAATAGCATACTTGTATGAGCACTTGAGTAGAGCCTCTCCCACTCTCGGGCCTG
rJMSF045K21-          GAGGAGTAATAGCATACTTGTATGAGCACTTGAGTAGAGCCTCTCCCACTCTCGGGCCTG
                      ____________________________________________________________
consensus             GAGGAGTAATAGCATACTTGTATGAGCACTTGAGTAGAGCCTCTCCCACTCTCGGGCCTG
 
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rJMSF034O20-          CCACTTCACTGATAGGCACAGCATCAGAAACGTTTTGCAGATCTTCTTTCGTGAGCTTTA
rJMSF045K21-          CCACTTCACTGATAGGCACAGCATCAGAAACGTTTTGCAGATCTTCTTTCGTGAGCTTTA
                      ____________________________________________________________
consensus             CCACTTCACTGATAGGCACAGCATCAGAAACGTTTTGCAGATCTTCTTTCGTGAGCTTTA
 
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rJMSF034O20-          TCTTCNCAGAGCCGATGTTCTCGTGAAGGTTTTTTATCTTAGTAGTTCCAGGAATGGGTA
rJMSF045K21-          TCTTCACAGAGCCGATGTCCTCGTGAAGGTTTTTTATCTTAGTAGTTCCAGGAATGGGTA
                      ____________________________________________________________
consensus             TCTTCACAGAGCCGATGTTCTCGTGAAGGTTTTTTATCTTAGTAGTTCCAGGAATGGGTA
 
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rJMSF034O20-          CAAAGTCATCCCCCTGTTGAAGAATCCACGCAAGAGCAAGTTGAGCAGGTGAGCATCCTT
rJMSF045K21-          CAAAGTCGTCCCCCTGTTGAAGAATCCACGCAAGAGCAAGTTGAGCAGGTGAGCATCCTT
                      ____________________________________________________________
consensus             CAAAGTCGTCCCCCTGTTGAAGAATCCACGCAAGAGCAAGTTGAGCAGGTGAGCATCCTT
 
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rJMSF034O20-          GTTTCTTAGAGAGTTCTTCCAAACGAAAATAGATGGTCTTGTTCTTCTCAAAGTTTTCGC
rJMSF045K21-          GTTTCTTAGAGAGTTCTTCCAAACGAAAATAGATGGTCTTGTTCTTCTCAAAGTTTTCGC
JMSF045K21+                                                               GTTTTCGC
                      ____________________________________________________________
consensus             GTTTCTTAGAGAGTTCTTCCAAACGAAAATAGATGGTCTTGTTCTTCTCAAAGTTTTCGC
 
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rJMSF034O20-          CTGTAAACCTGGGATGTTTCACCAAGGAGCTGTTAGCAGGCAAGCTCTCAGCAACTGCCT
rJMSF045K21-          CTGTAAACCTGGGATGTTTCACCAAGGAGCTGTTAGCAGGTAAGCTCTCAGCAACTGCCT
JMSF045K21+           CTGTAAACCTGGGATGTTTCACCAAGGAGCTGTTAGCAGGTAAGCTCTCAGCAACTGCCT
                      ____________________________________________________________
consensus             CTGTAAACCTGGGATGTTTCACCAAGGAGCTGTTAGCAGGTAAGCTCTCAGCAACTGCCT
 
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rJMSF034O20-          TTCCACCGAAAAGCCCACGACCAACAGGGCCGTATGGAACAATCCCAATTCGAAGTTCCC
rJMSF045K21-          TTCCACCGAAAAGCCCACGACCAACAGGGCCGTATGGAACAATCCCAATTCCAAGTTCCC
JMSF045K21+           TTCCACCGAAAAGCCCACGACCAACAGGGCCGTATGGAACAATCCCAATTCCAAGTTCCC
                      ____________________________________________________________
consensus             TTCCACCGAAAAGCCCACGACCAACAGGGCCGTATGGAACAATCCCAATTCCAAGTTCCC
 
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rJMSF034O20-          TGCAAAGCGGTACAATTTCCTCTTCANTGTCTCGTGTCCNCAGGGAA             
rJMSF045K21-          TGCAAAGCGGTACAATTTCCTCTTCAATGTCTCGTGTCCACAGGGAATACTCCAGTTGCA
JMSF034O20+                                       GTCTCGTGTCCACAGGGAATACTCCAGTTGCA
JMSF045K21+           TGCAAAGCGGTACAATTTCCTCTTCAATGTCTCGTGTCCACAGGGAATACTCCAGTTGCA
                      ____________________________________________________________
consensus             TGCAAAGCGGTACAATTTCCTCTTCAATGTCTCGTGTCCACAGGGAATACTCCAGTTGCA
 
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rJMSF045K21-          CAGCAGTTATTGGATGAACCGCATGTGCCCTCCTTATTGTGTCTGGGTGAGCTTCTGATA
JMSF034O20+           CAGCAGTTATTGGATGAACCGCATGTGCCCTCCTTATTGTGTCTGGGTGAGCTTCTGATA
JMSF045K21+           CAGCAGTTATTGGATGAACCGCATGTGCCCTCCTTATTGTGTCTGGGTGAGCTTCTGATA
                      ____________________________________________________________
consensus             CAGCAGTTATTGGATGAACCGCATGTGCCCTCCTTATTGTGTCTGGGTGAGCTTCTGATA
 
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rJMSF045K21-          AGCCAACATA                                                  
JMSF034O20+           AGCCAACATATTTTATTTTTCCTTCTTCAACTAATTTCTTCATTTCTCCCATAGTTTCCT
JMSF045K21+           AGCCAACATATTTTATTTTTCCTTCTTCAACTAATTTCTTCATTTCTCCCATAGTTTCCT
                      ____________________________________________________________
consensus             AGCCAACATATTTTATTTTTCCTTCTTCAACTAATTTCTTCATTTCTCCCATAGTTTCCT
 
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JMSF034O20+           CAATAGGTATTGTTGTATCAATACGATGTATGTAGTAAAGATCAATATAGTCAACCTGAA
JMSF045K21+           CAATAGGTATTGTTGTATCGATACGATGTATGTAGTAAAGATCAATATAGTCAACCTGAA
                      ____________________________________________________________
consensus             CAATAGGTATTGTTGTATCGATACGATGTATGTAGTAAAGATCAATATAGTCAACCTGAA
 
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JMSF034O20+           GGCGGTGCAAGCTAGCTTCACAGCAGGAGCGAACATAATCAGGAGTACCTCTCACGACAA
JMSF045K21+           GGCAGTGCAAGCTAGCTTCACAGCAGGAGCGAACATAATCAGGAGTACCTCTCACGACAA
                      ____________________________________________________________
consensus             GGCGGTGCAAGCTAGCTTCACAGCAGGAGCGAACATAATCAGGAGTACCTCTCACGACAA
 
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JMSF034O20+           CCTGAGTGGGTTCAAATCTGTACATCCCAAACTTTGTGGCTAGCTGTACTTTTTCTCTAG
JMSF045K21+           CCTGAGTGGGTTCAAATCTGTACATCCCAAACTTTGTGGCTAGCTGTACTTTTTCTCTAG
                      ____________________________________________________________
consensus             CCTGAGTGGGTTCAAATCTGTACATCCCAAACTTTGTGGCTAGCTGTACTTTTTCTCTAG
 
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JMSF034O20+           GCAAATGCTTTAATGCCTTTCCCACCAAATACTCATTGGAATGATTAGCCCCATAAACAT
JMSF045K21+           GCAAATGCTTTAATGCCTTTCCCACCAAATACTCATTGGAATGATTAGCCCCATAAACAT
                      ____________________________________________________________
consensus             GCAAATGCTTTAATGCCTTTCCCACCAAATACTCATTGGAATGATTAGCCCCATAAACAT
 
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JMSF034O20+           CAGCAGTATCAAGAAATGTGAATCCTGCATTGAAAGCCTCTTTGATAATTGCTATCCCTT
JMSF045K21+           CAGCAGTATCAAGAAATGTGATTCCTGCATTGAAAGCCTCTTTGATAATTGTTATCCCTT
                      ____________________________________________________________
consensus             CAGCAGTATCAAGAAATGTGATTCCTGCATTGAAAGCCTCTTTGATAATTGTTATCCCTT
 
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JMSF034O20+           CCTCCTCTGTCACTGGATTATTGTACATCCCAGTTAACCCCATACATCCATACCCCAATC
JMSF045K21+           CCTCCTCTGTCACTGGATTATTGTACATCCCAGTTAACCCCATACACCCATACCCCAATC
                      ____________________________________________________________
consensus             CCTCCTCTGTCACTGGATTATTGTACATCCCAGTTAACCCCATACATCCATACCCCAATC
 
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JMSF034O20+           TAGAAACCTCTAGCCCTTGGCTTCCCAGCTTCACTCTTGTCATCTCAGCCGCGTTCGCCA
JMSF045K21+           TAGAAACCTCTAGCCCTTGGCTTCCCAGCTTCACTCTTGTCATCTCAGCCGCGTTCGCCA
                      ____________________________________________________________
consensus             TAGAAACCTCTAGCCCTTGGCTTCCCAGCTTCACTCTTGTCATCTCAGCCGCGTTCGCCA
 
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JMSF034O20+           TTTGCGTTACCGTGTCTCTTCTTCTGGAGGGAATCGCTGCAATGCACCGCTGGTTTC   
JMSF045K21+           TTTGCGTTACCGTGTCTCTTCTTCTGGAGGGAATCGCTGCAATGCACCGCTGGTTTCATC
                      ____________________________________________________________
consensus             TTTGCGTTACCGTGTCTCTTCTTCTGGAGGGAATCGCTGCAATGCACCGCTGGTTTCATC