Contig 012154:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS168A03Sequence627012154 (2)emb|CDP16447.1|1e-107unnamed protein product [Coffea canephora]
JMSF045K05Sequence636012154 (2)emb|CDP16447.1|1e-106unnamed protein product [Coffea canephora]823020516ref|XP_009605009.1|7e-35PREDICTED: DNA topoisomerase 2-binding protein 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS168A03+                              ATGGTGAGCCCAGAAAAAGGGTGGACCCTGAATGACTCATG
JMSF045K05+                                   GAGCCCAGAAAAAGGGTGGACCCTGAATGACTCATG
                      ____________________________________________________________
consensus                                ATGGTGAGCCCAGAAAAAGGGTGGACCCTGAATGACTCATG
 
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JMFS168A03+           AGGAACAAAGCGATGCTCCTTCCAACATTGATGCAGCCAATTAATACTAACAATTGGTTT
JMSF045K05+           AGGAACAAAGCGATGCTCCTTCCAACATTGATGCAGCCAATTAATACTAACAATTGGTTT
                      ____________________________________________________________
consensus             AGGAACAAAGCGATGCTCCTTCCAACATTGATGCAGCCAATTAATACTAACAATTGGTTT
 
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JMFS168A03+           CTTCAGTACATTTACTGCCCATCGGTATTTTGCAGCCAAAACATTCTTCACAATGACAAA
JMSF045K05+           CTTCAGTACATTTACTGCCCATCGGTATTTTGCAGCCAAAACATTCTTCACAATGACAAA
                      ____________________________________________________________
consensus             CTTCAGTACATTTACTGCCCATCGGTATTTTGCAGCCAAAACATTCTTCACAATGACAAA
 
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JMFS168A03+           GTTTACATCCATTGATGCTTTTGCTTGCAAAACTCCTCCCATTGCTTCTACTAGCTTTTT
JMSF045K05+           GTTTACATCCATTGATGCTTTTGCTTGCAAAACTCCTCCCATTGCTTCTACTAGCTTTTT
                      ____________________________________________________________
consensus             GTTTACATCCATTGATGCTTTTGCTTGCAAAACTCCTCCCATTGCTTCTACTAGCTTTTT
 
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JMFS168A03+           TATTTCAACCTTTTCATCCGCTTCAAAACCAGATGCCAGTATTTTGACTCCGTCCATTGC
JMSF045K05+           TATTTCAACCTTTTCATCCGCTTCAAAACCAGATGCCAGTATTTTGACTCCGTCCATTGC
                      ____________________________________________________________
consensus             TATTTCAACCTTTTCATCCGCTTCAAAACCAGATGCCAGTATTTTGACTCCGTCCATTGC
 
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JMFS168A03+           AAGGCAACATGTAAAACCTTGATTGGGCAGTGGTCTCTGTTCCTTGGCACAAAAAAGCAC
JMSF045K05+           AAGGCAACATGTAAAACCTTGATTGGGCAGTGGTCTCTGTTCCTTGGCACAAAAAAGCAC
                      ____________________________________________________________
consensus             AAGGCAACATGTAAAACCTTGATTGGGCAGTGGTCTCTGTTCCTTGGCACAAAAAAGCAC
 
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JMFS168A03+           ACACTGAGGACCAATCAAATTGCATTTTTTGGAGCGGAGATCCTCGAATTTCTCATGATC
JMSF045K05+           ACACTGAGGACCAATCAAATTGCATTTTTTGGAGCGGAGATCCTCGAATTTCTCATGATC
                      ____________________________________________________________
consensus             ACACTGAGGACCAATCAAATTGCATTTTTTGGAGCGGAGATCCTCGAATTTCTCATGATC
 
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JMFS168A03+           GATAGAGGAAATGATGTGGTAGTCGTCGGGCGCGTTGCGGGAGGGGTCACAGCAGAGGAA
JMSF045K05+           GATAGAGGAAATGATGTGGTAGTCGTCGGGCGCGTTGCGGGAGGGGTCACAGCAGAGGAA
                      ____________________________________________________________
consensus             GATAGAGGAAATGATGTGGTAGTCGTCGGGCGCGTTGCGGGAGGGGTCACAGCAGAGGAA
 
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JMFS168A03+           GACCTGAGCTCCGTTGAGCTTGAGCGCGTCGTGAAGAGCGTCGAAGTGCTCCGGCGGAAC
JMSF045K05+           GACCTGAGCTCCGTTGAGCTTGAGCGCGTCGTGAAGAGCGTCGAAGTGCTCCGGCGGAAC
                      ____________________________________________________________
consensus             GACCTGAGCTCCGTTGAGCTTGAGCGCGTCGTGAAGAGCGTCGAAGTGCTCCGGCGGAAC
 
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JMFS168A03+           CAGGTTCCGCGACATGAACACGTTGGCTCCCTTGAACACCTTCGCCATGATCATCTTCTT
JMSF045K05+           CAGGTTCCGCGACATGAACACGTTGGCTCCCTTGAACACCTTCGCCATGATCATCTTCTT
                      ____________________________________________________________
consensus             CAGGTTCCGCGACATGAACACGTTGGCTCCCTTGAACACCTTCGCCATGATCATCTTCTT
 
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JMFS168A03+           CGACTATCTACCTACATTCGCTCATCCAGGTGAACTGAAGACATAA              
JMSF045K05+           CGACTATCTACCTACATTCGCTCATCCAGGTGAACTGAAGACATAAGAGTATATGAGCCC
                      ____________________________________________________________
consensus             CGACTATCTACCTACATTCGCTCATCCAGGTGAACTGAAGACATAAGAGTATATGAGCCC