| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN016P09 | Sequence | 598 | 012151 (8) | gb|AEO27875.1| | 2e-83 | SOD2 [Scutellaria baicalensis] | |||||
| JMSF016J09 | Sequence | 529 | 012151 (8) | gb|AEO27875.1| | 2e-54 | SOD2 [Scutellaria baicalensis] | 741 | 012151 (8) | gb|AEO27875.1| | 2e-92 | SOD2 [Scutellaria baicalensis] |
| JMSF043N17 | Sequence | 699 | 012151 (8) | gb|AEO27875.1| | 3e-94 | SOD2 [Scutellaria baicalensis] | 622 | 012151 (8) | gb|AEO27875.1| | 2e-94 | SOD2 [Scutellaria baicalensis] |
| JMSF044M11 | Sequence | 693 | 012151 (8) | gb|AEO27875.1| | 2e-81 | SOD2 [Scutellaria baicalensis] | 125 | 018324 | |||
| JMSF050N20 | Sequence | 603 | 012151 (8) | gb|AEO27875.1| | 8e-82 | SOD2 [Scutellaria baicalensis] | 685 | 012151 (8) | gb|AEO27875.1| | 1e-81 | SOD2 [Scutellaria baicalensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF050N20- ATGACAGGATGCAGGAAAGAACAGTTGACAATACATACAAAACAGTTG
rJMSF016J09- GACAGGATGCAGGAAAGAACAGTTGACAATACATACAAAACAGTTG
____________________________________________________________
consensus ATGACAGGATGCAGGAAAGAACAGTTGACAATACATACAAAACAGTTG
. : . : . : . : . : . :
rJMSF050N20- GAAGCATAAATGTAAGCAGGGTCATTTTGGTATTGAAGAGGTGAATAAAATTCAATAACA
rJMSF016J09- GAAGCATAAATGTAAGCAGGGTCATTTTGGTATTGAAGAGGTGAATAAAATTCAATAACA
____________________________________________________________
consensus GAAGCATAAATGTAAGCAGGGTCATTTTGGTATTGAAGAGGTGAATAAAATTCAATAACA
. : . : . : . : . : . :
rJMSF050N20- ATACATTGAAGAAGCATTACTTGCAAAGCCATGCTAAACTCATTCAAGTATACATACAGA
rJMSF043N17- GCATTACTTGCAAAGCCATGCTAAACTCATTCAAGTATACATACAGA
rJMSF016J09- ATACATTGAAGAAGCATTACTTGCAAAGCCATGCTAAACTCATTCAAGTATACATACAGA
____________________________________________________________
consensus ATACATTGAAGAAGCATTACTTGCAAAGCCATGCTAAACTCATTCAAGTATACATACAGA
. : . : . : . : . : . :
rJMSF050N20- TCCAAATTTATTAGGCTGTGAATATCTGAGATGACCTCGCCATGTAAACTCTATGCAAAA
rJMSF043N17- TCCAAATTTATTAGGCTGTGAATATCTGAGATGACCTCGCCATGTAAACTCTATGCAAAA
rJMSF016J09- TCCAAATTTATTAGGCTGTGAATATCTGAGATGACCTCGCCATGTAAACTCTATGCAAAA
____________________________________________________________
consensus TCCAAATTTATTAGGCTGTGAATATCTGAGATGACCTCGCCATGTAAACTCTATGCAAAA
. : . : . : . : . : . :
rJMSF050N20- CAAGTGAAGAAGTAACACTAAACGAAGAAAGGGCCAGCTCCAATTCTTGAATTATATTGG
rJMSF043N17- CAAGTGAAGAAGTAACACTAAACGAAGAAAGGGCCAGCTCCAATTCTTGAATTATATTGG
rJMSF016J09- CAAGTGAAGAAGTAACACTAAACGAAGAAAGGGCCAGCTCCAATTCTTGAATTATATTGG
____________________________________________________________
consensus CAAGTGAAGAAGTAACACTAAACGAAGAAAGGGCCAGCTCCAATTCTTGAATTATATTGG
. : . : . : . : . : . :
rJMSF050N20- AGTCAAACCGACCACACCGCATGCCAACCGTCCACCTGCATTTCCAGTAGAGAGACTAAG
rJMSF043N17- AGTCAAACCGACCACACCGCATGCCAACCGTCCACCTGCATTTCCAGTAGAGAGACTAAG
rJMSF016J09- AGTCAAACCGACCACACCGCATGCCAACCGTCCACCTGCATTTCCAGTAGAGAGACTAAG
JMSF043N17+ TGCATTTCCAGTAGAGAGACTAAG
____________________________________________________________
consensus AGTCAAACCGACCACACCGCATGCCAACCGTCCACCTGCATTTCCAGTAGAGAGACTAAG
. : . : . : . : . : . :
rJMSF050N20- CTCATGGCCACCCTTTCCAAGGTCATCCTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
rJMSF043N17- CTCATGGCCACCCTTTCCAAGGTCATCCTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
rJMSF016J09- CTCATGGCCACCCTTTCCAAGGTCATCCTCAAGTTCATGTACCACTAAAGCTATTCCAAC
JMSF050N20+ CTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
JMFN016P09+ TTCCAAGGTCATCNTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
JMSF043N17+ CTCATGGCCACCCTTTCCAAGGTCATCCTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
JMSF044M11+ CTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
____________________________________________________________
consensus CTCATGGCCACCCTTTCCAAGGTCATCCTCAAGTTCATGTACCACTAAAGCTCTTCCAAC
. : . : . : . : . : . :
rJMSF050N20- AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
rJMSF043N17- AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
rJMSF016J09- AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
JMSF050N20+ AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
JMFN016P09+ AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
JMSF043N17+ AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
JMSF044M11+ AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
____________________________________________________________
consensus AACCGAGTTTGGACCACTTAGTGGTATCTGGCTATCGACGATTGTTGCTTCTGCAACACC
. : . : . : . : . : . :
rJMSF050N20- TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
rJMSF043N17- TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
rJMSF016J09- TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
JMSF050N20+ TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
JMFN016P09+ TTCGGCATTAGCCAATATGTTTCNCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
JMSF043N17+ TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
JMSF016J09+ GTCACCCGCATGACGGACTTCATCCTCAGGAGC
JMSF044M11+ TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
____________________________________________________________
consensus TTCGGCATTAGCCAATATGTTTCCCAGGTCACCCGCATGACGGACTTCATCCTCAGGAGC
. : . : . : . : . : . :
rJMSF050N20- TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
rJMSF043N17- TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
rJMSF016J09- TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
JMSF050N20+ TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
JMFN016P09+ TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
JMSF043N17+ TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
JMSF016J09+ TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
JMSF044M11+ TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
____________________________________________________________
consensus TCCATGTGTCAACCCATTGGGATTAAAATGTGGTCCTGTAGAAATGCACCCATTTGTCGT
. : . : . : . : . : . :
rJMSF050N20- ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
rJMSF043N17- ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
rJMSF016J09- ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
JMSF050N20+ ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
JMFN016P09+ ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
JMSF043N17+ ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
JMSF016J09+ ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
JMSF044M11+ ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
____________________________________________________________
consensus ATCACCATACTCATGAAGATGAAATCCATGAGGTCCAGGAGTAAGGCCAGTTATACGAAC
. : . : . : . : . : . :
rJMSF050N20- TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGA
rJMSF043N17- TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
rJMSF016J09- TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
JMSF050N20+ TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
JMFN016P09+ TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
JMSF043N17+ TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
JMSF016J09+ TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
JMSF044M11+ TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
____________________________________________________________
consensus TTTCACAGTGGTAGGACCATCGCCGTCTTGTGTGAGAGTGACGACGCCTTCGACATTGGA
. : . : . : . : . : . :
rJMSF043N17- GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGG
rJMSF016J09- GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGG
JMSF050N20+ GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
JMFN016P09+ GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
JMSF043N17+ GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
JMSF016J09+ GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
JMSF044M11+ GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
____________________________________________________________
consensus GGTGCCTTTGAGTACAGCGACAGCCTTCTTGGAGGAGGCGACGACGGTGAGGGGCTTGGG
. : . : . : . : . : . :
JMSF050N20+ GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
JMFN016P09+ GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
JMSF043N17+ GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
JMSF016J09+ GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
JMSF044M11+ GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
____________________________________________________________
consensus GGCGGAGACGGCGCGGAGGGCGAGCGATTGGTGAGCGGGTTTATTGTTGACTTTGAGGGA
. : . : . : . : . : . :
JMSF050N20+ CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
JMFN016P09+ CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
JMSF043N17+ CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
JMSF016J09+ CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
JMSF044M11+ CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
____________________________________________________________
consensus CACGCCGGGGAACGAGGAGTGGAGCGGAGAAGCGTTAGGGGCGGAGACGGGGAAGAGGAG
. : . : . : . : . : . :
JMSF050N20+ GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
JMFN016P09+ GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
JMSF043N17+ GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
JMSF016J09+ GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
JMSF044M11+ GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
____________________________________________________________
consensus GGAGTGGGAGGCAACGGTGGCGGAAGAGAGGATAGTGTGCGCGGCCATGGCTGCCACACA
. : . : . : . : . : . :
JMSF050N20+ GGCGGCGAGCATGAAGATTAGATGACGA
JMFN016P09+ GGCGGCGAGCAT
JMSF043N17+ GGCGGCGAGCATGAAGATTAGATGACGATAATGTGAGTGAAGCGGAGAGTGTGGTATTTG
JMSF016J09+ GGCGGCGAGCATGAAGATTAGATGACGATAATGTGAGTGAAGCGGAGAGTGTGGTATTTG
JMSF044M11+ GGCGGCGAGCATGAAGATTAGATGACGATAATGTGAGTGAAGCGGAGAGTGTGGTATTTG
____________________________________________________________
consensus GGCGGCGAGCATGAAGATTAGATGACGATAATGTGAGTGAAGCGGAGAGTGTGGTATTTG
. : . : . : . : . : . :
JMSF043N17+ CAGCTCTGCTTC
JMSF016J09+ CAGCTCTGCTTC
JMSF044M11+ CAGCTCTGCTTCTCGGAGCTTCTTCCTTATTTTTTGCTCCTCTATATTTTTGTCATTTTC
____________________________________________________________
consensus CAGCTCTGCTTCTCGGAGCTTCTTCCTTATTTTTTGCTCCTCTATATTTTTGTCATTTTC