Contig 012149:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018F04Sequence226012149 (2)ref|XP_010106480.1|6e-20hypothetical protein L484_025237 [Morus notabilis] gb|EXC10656.1| hypothetical p763010074 (2)ref|XP_004247835.1|1e-14PREDICTED: ankyrin repeat domain-containing protein 13C-A-like [Solanum lycoper
JMSF044E15Sequence839012149 (2)ref|XP_009773242.1|8e-100PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Nicotiana syl782010074 (2)ref|XP_004247835.1|1e-14PREDICTED: ankyrin repeat domain-containing protein 13C-A-like [Solanum lycoper

Alignment

This contig is upended


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JMSF044E15+            CCGCTTTATCCATGCAGGAGAGCACTTCGAGTGCTTTCTCCATGTTATTAGATCGAGCA
                      ____________________________________________________________
consensus              CCGCTTTATCCATGCAGGAGAGCACTTCGAGTGCTTTCTCCATGTTATTAGATCGAGCA
 
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JMSF044E15+           AAGGGCGTCGATCAGAATTGTGTATGTCACTTTCGAAGGAGAAATGCCTCTCTCCTCCAT
                      ____________________________________________________________
consensus             AAGGGCGTCGATCAGAATTGTGTATGTCACTTTCGAAGGAGAAATGCCTCTCTCCTCCAT
 
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JMSF044E15+           CTCGCGAANTAAATCAAGAACTCTCATTGGATTTTCAGCTTTAGAGAAACCTGCGATTAG
                      ____________________________________________________________
consensus             CTCGCGAANTAAATCAAGAACTCTCATTGGATTTTCAGCTTTAGAGAAACCTGCGATTAG
 
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JMSF044E15+           AGCATTGTAAGTAATTAACGATGGAGCTAAACCGCAAGACTTCAACTGATTGAACAAGCT
                      ____________________________________________________________
consensus             AGCATTGTAAGTAATTAACGATGGAGCTAAACCGCAAGACTTCAACTGATTGAACAAGCT
 
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JMSF044E15+           AAATGCTTTCTCGATCTTCCCAGCTTTGCTATACCCATCGATCAGAATGTTATAAGTAAT
                      ____________________________________________________________
consensus             AAATGCTTTCTCGATCTTCCCAGCTTTGCTATACCCATCGATCAGAATGTTATAAGTAAT
 
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JMSF044E15+           CAGATTAGGAGTAAACCCATCACTCTTCATCCGACCAACCAATTTCTCTGCATCCATCAT
                      ____________________________________________________________
consensus             CAGATTAGGAGTAAACCCATCACTCTTCATCCGACCAACCAATTTCTCTGCATCCATCAT
 
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JMSF044E15+           TCTTGTCTGCCGACATAACCCTCTAATTAAAGTGTTATAAGTAACAACATTGCATACAAC
                      ____________________________________________________________
consensus             TCTTGTCTGCCGACATAACCCTCTAATTAAAGTGTTATAAGTAACAACATTGCATACAAC
 
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JMSF044E15+           CCCTCCATCACGCATTTCGTCAAACAATTGAAAAGCGGTGTCTATTCGACACTCACTGCA
                      ____________________________________________________________
consensus             CCCTCCATCACGCATTTCGTCAAACAATTGAAAAGCGGTGTCTATTCGACACTCACTGCA
 
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JMSF044E15+           ATGAACATTGATCATAGAGCTGTAAGTATGTGTATCAGGGTATGTACCATCAATTTTCAT
                      ____________________________________________________________
consensus             ATGAACATTGATCATAGAGCTGTAAGTATGTGTATCAGGGTATGTACCATCAATTTTCAT
 
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JMSF044E15+           CCTCTCATAAAGCTCAAAACCATCTCTTTCAAGCCCATTCTTGAAAAACCCATTGATCAA
                      ____________________________________________________________
consensus             CCTCTCATAAAGCTCAAAACCATCTCTTTCAAGCCCATTCTTGAAAAACCCATTGATCAA
 
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JMSF018F04+                         ACTGATTAGGAACAAGCCCCAATTCTGACATTCCATGAAACAACTC
JMSF044E15+           AACTGTGTAAGTGTACTGATTAGGAACAAGCCCCAATTCTGACATTCCATGAAACAACTC
                      ____________________________________________________________
consensus             AACTGTGTAAGTGTACTGATTAGGAACAAGCCCCAATTCTGACATTCCATGAAACAACTC
 
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JMSF018F04+           CTTTGCCTTTTGAATATCACCATTCTTAACACCCATCTATCAAAGTGGTATATATAACAA
JMSF044E15+           CTTTGCCTTTTGAATATCACCATTCTTAACACCCATCTATCAAAGTGGTATATATAACAA
                      ____________________________________________________________
consensus             CTTTGCCTTTTGAATATCACCATTCTTAACACCCATCTATCAAAGTGGTATATATAACAA
 
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JMSF018F04+           CATTTGGACACCAACCCATATCTTCCAACTGACCCAAAAACTCAAAACCCCTCTTCAAGT
JMSF044E15+           CATTTGGACACCAACCCATATCTTCCAACTGACCCAAAAACTCAAAACCCCTCTTCAAGT
                      ____________________________________________________________
consensus             CATTTGGACACCAACCCATATCTTCCAACTGACCCAAAAACTCAAAACCCCTCTTCAAGT
 
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JMSF018F04+           CTCCATTGTCACAGCAACCCTTAATCACAATCCCAAAACTATACACATCCAAACCCAAGC
JMSF044E15+           CTCCATTGTCACAGCAACCCTTAATCACAATCCCAAAACTATACACATCCAAACCCAAGC
                      ____________________________________________________________
consensus             CTCCATTGTCACAGCAACCCTTAATCACAATCCCAAAACTATACACATCCAAACCCAAGC