Contig 012146:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J17Sequence504012146 (6)dbj|BAO57290.1|1e-68homogentisate 1,2-dioxygenase [Ipomoea nil]750008134 (6)dbj|BAO57290.1|2e-133homogentisate 1,2-dioxygenase [Ipomoea nil]
JMSF010J10Sequence415012146 (6)dbj|BAO57290.1|4e-44homogentisate 1,2-dioxygenase [Ipomoea nil]758008134 (6)dbj|BAO57290.1|3e-103homogentisate 1,2-dioxygenase [Ipomoea nil]
JMSF015N02Sequence231012146 (6)771008134 (6)dbj|BAO57290.1|2e-142homogentisate 1,2-dioxygenase [Ipomoea nil]
JMSF032M01Sequence596012146 (6)dbj|BAO57290.1|8e-126homogentisate 1,2-dioxygenase [Ipomoea nil]609008134 (6)dbj|BAO57290.1|8e-108homogentisate 1,2-dioxygenase [Ipomoea nil]
JMSF032N01Sequence675012146 (6)dbj|BAO57290.1|2e-147homogentisate 1,2-dioxygenase [Ipomoea nil]706008134 (6)dbj|BAO57290.1|1e-132homogentisate 1,2-dioxygenase [Ipomoea nil]
JMSF043P02Sequence695012146 (6)dbj|BAO57290.1|1e-104homogentisate 1,2-dioxygenase [Ipomoea nil]765008134 (6)dbj|BAO57290.1|4e-140homogentisate 1,2-dioxygenase [Ipomoea nil]

Alignment

This contig is upended


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JMSF032N01+                                                 CCATCCGGCAGATCAACAGCAA
                      ____________________________________________________________
consensus                                                   CCATCCGGCAGATCAACAGCAA
 
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JMSF032N01+           AGCGAAATCCTTGAGGAATAACAACTATTTCACCAGGATTGACTTGCAACCTACCACATT
JMSF032M01+                                                                    ATT
                      ____________________________________________________________
consensus             AGCGAAATCCTTGAGGAATAACAACTATTTCACCAGGATTGACTTGCAACCTACCACATT
 
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JMSF032N01+           CAGTTGTAATCCACAACCTTCCTTTTTGAGGAACTATCAAAAAGTCCCCATCAGCATTGC
JMSF032M01+           CAGTTGTAATCCACAACCTTCCTTTTTGAGGAACTATCAAAAAGTCCCCATCAGCATTGC
JMSF043P02+                                   TTTGAGGAACTATCAAAAAGTCCCCATCAGCATTGC
                      ____________________________________________________________
consensus             CAGTTGTAATCCACAACCTTCCTTTTTGAGGAACTATCAAAAAGTCCCCATCAGCATTGC
 
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JMSF032N01+           AAAATGCACAGTTGTCCATTGATTTGTTAGCTGTATACATGTGAATTGCAAAACCATGCC
JMSF032M01+           AAAATGCACAGTTGTCCATTGATTTGTTAGCTGTATACATGTGAATTGCAAAACCATGCC
JMSF043P02+           AAAATGCACAGTTGTCCATTGATTTGTTAGCTGTATACATGTGAATTGCAAAACCATGCC
                      ____________________________________________________________
consensus             AAAATGCACAGTTGTCCATTGATTTGTTAGCTGTATACATGTGAATTGCAAAACCATGCC
 
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JMSF032N01+           GGAGGTAAGAGCTGCCAGCTCCACATACAGTGTACAGCCCATCAATGAAATCAGTTGGTG
JMSF032M01+           GGAGGTAAGAGCTGCCAGCTCCACATACAGTGTACAGCCCATCAATGAAATCAGTTGGTG
JMSF043P02+           GGAGGTAAGAGCTGCCAGCTCCACATACAGTGTACAGCCCATCAATGAAATCAGTTGGTG
                      ____________________________________________________________
consensus             GGAGGTAAGAGCTGCCAGCTCCACATACAGTGTACAGCCCATCAATGAAATCAGTTGGTG
 
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JMSF032N01+           TTTCTGGGATATCCACAGGCTTCCACCGTAATTGAGTAGGTGTAGCAGAACTATTTGACT
JMSF032M01+           TTTCTGGGATATCCACAGGCTTCCACCGTAATTGAGTAGGTGTAGCAGAACTATTTGACT
JMFF005J17+                                        AATTGAGTAGGTGTAGCAGAACTATTTGACT
JMSF043P02+           TTTCTGGGATATCCACAGGCTTCCACCGTAATTGAGTAGGTGTAGCAGAACTATTTGACT
                      ____________________________________________________________
consensus             TTTCTGGGATATCCACAGGCTTCCACCGTAATTGAGTAGGTGTAGCAGAACTATTTGACT
 
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JMSF032N01+           GGTTGAACTCACTGACAAGTCTTTCATGAGTTGGAACTCTAGGTTTAAATGGCTCATGGG
JMSF032M01+           GGTTGAACTCACTGACAAGTCTTTCATGAGTTGGAACTCTAGGTTTAAATGGCTCATGGG
JMSF010J10+                                                                   TGGG
JMFF005J17+           GGTTGAACTCACTGACAAGTCTTTCATGAGTTGGAACTCTAGGTTTAAATGGCTCATGGG
JMSF043P02+           GGTTGAACTCACTGACAAGTCTTTCATGAGTTGGAACTCTAGGTTTAAATGGCTCATGGG
                      ____________________________________________________________
consensus             GGTTGAACTCACTGACAAGTCTTTCATGAGTTGGAACTCTAGGTTTAAATGGCTCATGGG
 
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JMSF032N01+           TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATTGAGTTTGCGAGGGGAGGTGA
JMSF032M01+           TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATTGAGTTTGCGAGGGGAGGTGA
JMSF010J10+           TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATNGAGTNTGCGAGGGGAGGTGA
JMFF005J17+           TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATTGAGTTTGCGAGGGGAGGTGA
JMSF043P02+           TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATTGAGTTTGCGAGGGGAGGTGA
                      ____________________________________________________________
consensus             TAACTGATGGCTTAACACGATAGAACCAGCTGAGCTGATTGAGTTTGCGAGGGGAGGTGA
 
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JMSF032N01+           AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTCT
JMSF032M01+           AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTNT
JMSF010J10+           AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTCT
JMFF005J17+           AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTCT
JMSF043P02+           AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTCT
                      ____________________________________________________________
consensus             AAGAGGTGCCGGAAATCTGCTCAGCGTATAGGCCGAGAGGGCAGACAAGCGGACTGTTCT
 
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JMSF032N01+           GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCCGAAGCCTGATT
JMSF032M01+           GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCCGAAGCCTGATT
JMSF015N02+                                                                   GATT
JMSF010J10+           GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCTGAAGCCTGATT
JMFF005J17+           GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCCGAAGCCTGATT
JMSF043P02+           GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCCGAAGCCTGATT
                      ____________________________________________________________
consensus             GGCCTCTGGGAAGAGCTCCGGCGATCGCCTCCGAGGAGAAGTGGTTGCCGAAGCCTGATT
 
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JMSF032N01+           GGTACTCCAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
JMSF032M01+           GGTACTCCAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
JMSF015N02+           GGTACTCCAAATCCGCCGGAAAATTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
JMSF010J10+           GGTACTCCAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
JMFF005J17+           GGTACTCCAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
JMSF043P02+           GGTACT-CAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
                      ____________________________________________________________
consensus             GGTACTCCAAATCCGCCGGAAATTTGGGAGATCCGGTGACATTATCATCCTTACTCTCCA
 
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JMSF032N01+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGC        
JMSF032M01+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGC        
JMSF015N02+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGCATGGATAG
JMSF010J10+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGCATGGATAG
JMFF005J17+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGCATGGATAG
JMSF043P02+           TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGCATGGATAG
                      ____________________________________________________________
consensus             TGTCCGTAGCAATCCAAGTTCAATTACTTCAAAGCTCGCTCAGTACAGAGGCATGGATAG
 
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JMSF015N02+           AAGTGATCAGAAGAAGGTATATGAAGGAGCTGTGCTGTCGTGGCGCGATTATCCGTTACT
JMSF010J10+           AAGTGATCAGAAGAAGGTATATGAAGGAGCTGTGCTGTCGTGGCGCGATTATCCGTTACT
JMFF005J17+           AAGTGATCAGAAGAAGGTATATGAAGGAGCTGTGCTGTCGTGGCGCGATTATCCGTTACT
JMSF043P02+           AAGTGATCAGAAGAAGGTATATGAAGGAGCTGTGCTGTCGTGGCGCGATTATCCGTTACT
                      ____________________________________________________________
consensus             AAGTGATCAGAAGAAGGTATATGAAGGAGCTGTGCTGTCGTGGCGCGATTATCCGTTACT
 
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JMSF015N02+           TGGTTACATTCAGTCAGAGTGTCGTAGCAACCTCTCCAAACTCTTT              
JMSF010J10+           TGGTTACATTCAGTCAGAGTGTCGTAGCAACCTCTCCAAACTCTTT              
JMFF005J17+           TGGTTACATTCAGTCAGAGTGTCGTAGCAACCTCTCCAAACTCTTT              
JMSF043P02+           TGGTTACATTCAGTCAGAGTGTCGTAGCAACCTCTCCAAACTCTTTGCTCATTGTCGCCC
                      ____________________________________________________________
consensus             TGGTTACATTCAGTCAGAGTGTCGTAGCAACCTCTCCAAACTCTTTGCTCATTGTCGCCC