Contig 012144:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043I24+                                                                TCATTAC
                      ____________________________________________________________
consensus                                                                  TCATTAC
 
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JMSF043I24+           CATAGTACAGCTTGAACAGATTGATGGTAATGTACAACACCAAAAGGCCATTCGCAGCAA
                      ____________________________________________________________
consensus             CATAGTACAGCTTGAACAGATTGATGGTAATGTACAACACCAAAAGGCCATTCGCAGCAA
 
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JMSF043I24+           GAAGGAAACCCATCACCGCACCAGATCTAAATGCAATAATGAAAGCCTTCCCAACACCCT
                      ____________________________________________________________
consensus             GAAGGAAACCCATCACCGCACCAGATCTAAATGCAATAATGAAAGCCTTCCCAACACCCT
 
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JMFS103A01+                                            AAGTTGCTATTTTCATTCCAAGANAAC
JMFS135D10+                                        GCATAAGTTGCTATTTTCATTCCAAGAAAAC
JMSF043I24+           TTCTAGCTTCCAAAGTTGTTCTGGCATTTGCATAAGTTGCTATTTTCATTCCAAGAAAAC
                      ____________________________________________________________
consensus             TTCTAGCTTCCAAAGTTGTTCTGGCATTTGCATAAGTTGCTATTTTCATTCCAAGAAAAC
 
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JMFS103A01+           CAGAAACTACAGAAGTAACAGCACCAAGCAAGAAAGATATGGTGCTAAAGACAGCAGTAG
JMFS135D10+           CAGAAACTACAGAAGTAACAGCACCAAGCAAGAAAGATATGGTGCTAAAGACAGCAGTAG
JMSF043I24+           CAGAAACTACAGAAGTAACAGCACCAAGCAAGAAAGATATGGTGCTAAAGACAGCAGTAG
                      ____________________________________________________________
consensus             CAGAAACTACAGAAGTAACAGCACCAAGCAAGAAAGATATGGTGCTAAAGACAGCAGTAG
 
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JMFS103A01+           CAAGAGCAGGCTTGCACAATTTGGTCTCATCATATGTGCAAGGCTGGCTCATTGTGCTGA
JMFS135D10+           CAAGAGCAGGCTTGCACAATTTGGTCTCATCATATGTGCAAGGCTGGCTCATTGTGCTGA
JMSF043I24+           CAAGAGCAGGCTTGCACAATTTGGTCTCATCATATGTGCAAGGCTGGCTCATTGTGCTGA
                      ____________________________________________________________
consensus             CAAGAGCAGGCTTGCACAATTTGGTCTCATCATATGTGCAAGGCTGGCTCATTGTGCTGA
 
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JMFS103A01+           AACCTTCAACTGAGCCAAGAAATACGAAGATCAAAATAGCAAAAGCAACCATGAAAATAC
JMFS135D10+           AACCTTCAACTGAGCCAAGAAATACGAAGATCAAAATAGCAAAAGCAACCATGAAAATAC
JMSF043I24+           AACCTTCAACTGAGCCAAGAAATACGAAGATCAAAATAGCAAAAGCAACCATGAAAATAC
                      ____________________________________________________________
consensus             AACCTTCAACTGAGCCAAGAAATACGAAGATCAAAATAGCAAAAGCAACCATGAAAATAC
 
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JMFS103A01+           CAACATATTGGTATTCAGTGAAAAGGAAAGAAGTTGCACCTTCGGAGATGGCGCTTTGGA
JMFS135D10+           CAACATATTGGTATTCAGTGAAAAGGAAAGAAGTTGCACCTTCGGAGATGGCGCTTTGGA
JMSF043I24+           CAACATATTGGTATTCAGTGAAAAGGAAAGAAGTTGCACCTTCGGAGATGGCGCTTTGGA
                      ____________________________________________________________
consensus             CAACATATTGGTATTCAGTGAAAAGGAAAGAAGTTGCACCTTCGGAGATGGCGCTTTGGA
 
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JMFS103A01+           TTTCGGCGCACTTCTGAACGACGTTATGGTCATTAATGCCTTCCTCCTCCTCAATAAGCG
JMFS135D10+           TTTCGGCGCACTTCTGAACGACGTTATGGTCATTAATGCCTTCCTCCTCCTCAATAAGCG
JMSF043I24+           TTTCGGCGCACTTCTGAACGACGTTATGGTCATTAATGCCTTCCTCCTCCTCAATAAGCG
                      ____________________________________________________________
consensus             TTTCGGCGCACTTCTGAACGACGTTATGGTCATTAATGCCTTCCTCCTCCTCAATAAGCG
 
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JMFS103A01+           ACTCAGCGAAGCCGTTCTTCGCGTCAGAGTCAGAGGCGGACTTCTCCGGCGAGAGCTTGA
JMFS135D10+           ACTCAGCGAAGCCGTTCTTCGCGTCAGAGTCAGAGGCGGACTTCTCCGGCGAGAGCTTGA
JMSF043I24+           ACTCAGCGAAGCCGTTCTTCGCGTCAGAGTCAGAGGCGGACTTCTCCGGCGAGAGCTTGA
                      ____________________________________________________________
consensus             ACTCAGCGAAGCCGTTCTTCGCGTCAGAGTCAGAGGCGGACTTCTCCGGCGAGAGCTTGA
 
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JMFS103A01+           CCTTGGATACAAGGATCCACTGGACTAGCGCAAAGGCTATGCCGACTATGGCGCACACTG
JMFS135D10+           CCTTGGATACAAGGATCCACTGGACTAGCGCAAAGGCTATGCCGACTATGGCGCACACTG
JMSF043I24+           CCTTGGATACGAGGATCCACTGGACTAGCGCAAAGGCTATGCCGACTATGGCGCACACTG
                      ____________________________________________________________
consensus             CCTTGGATACAAGGATCCACTGGACTAGCGCAAAGGCTATGCCGACTATGGCGCACACTG
 
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JMFS103A01+           GAATCAGTATCTCCGTCCCGAGATCTGGCAGAATAGTCGAAGCACCCATGGCCGTCGCCT
JMFS135D10+           GAATCAGTATCTCCGTCCCGAGATCTGGCAGAATAGTCGAAGCACCCATGGCCGTCGCCT
JMSF043I24+           GAATCAGTATCTCCGTCCCGAGATCTGGCAGAATAGTCGAAGCACCCATGGCCGTCGCCT
                      ____________________________________________________________
consensus             GAATCAGTATCTCCGTCCCGAGATCTGGCAGAATAGTCGAAGCACCCATGGCCGTCGCCT
 
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JMFS103A01+           CTGCCGGAAAACCGAGCTGCGGAGGCGGGGGTCGAAGAAAGTGGGAGAAGAAATGGGAGA
JMFS135D10+           CTGCCGGAAAACCGAGCTGCGGAGGCGGGGGTCGAAGAAAGTGGGAGAAGAAATGGGAGA
JMSF043I24+           CTGCCGGAAAACCGAGCTGCGGAGGCGGGGGTCGAAGAAAGTGGGAGAAGAAATGGGAGA
                      ____________________________________________________________
consensus             CTGCCGGAAAACCGAGCTGCGGAGGCGGGGGTCGAAGAAAGTGGGAGAAGAAATGGGAGA
 
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JMFS103A01+           ACGGAGGACGAAATAGGAAGGCGACGTCTGCGGTGGTTTA                    
JMFS135D10+           ACGGAGGACGAAATAGGAAGGCGACGTCTGCGGTGGTTTA                    
JMSF043I24+           ACGGAGGACGAAATAGGAAGGCGACGTCTGCGGTGGTTTACACTCTTCTTGGAGATTATC
                      ____________________________________________________________
consensus             ACGGAGGACGAAATAGGAAGGCGACGTCTGCGGTGGTTTACACTCTTCTTGGAGATTATC