Contig 012142:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043H24+                             AAGTGAGAAACAAATTGACAATGCCATGGTACAAATTACACA
                      ____________________________________________________________
consensus                               AAGTGAGAAACAAATTGACAATGCCATGGTACAAATTACACA
 
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JMSF033M23+                  AGACATACATGTAGGAATACCTTTCTCATACACTTATAAATATACCTAAACAT
JMSF043H24+           ATACCCAAGACATACATGTAGGAATACCTTTCTCATACACTTATAAATATACCTAAACAT
                      ____________________________________________________________
consensus             ATACCCAAGACATACATGTAGGAATACCTTTCTCATACACTTATAAATATACCTAAACAT
 
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JMSF033M23+           TTAATGTGGATGGTAAGTGTTGACTATTATATACTAATGTTTGATTGAGACTTCTTAGCA
JMSF039P09+           TTAATGTGGATGGTAAGTGTTGACTATTATATACTAATGTTTGATTGAGACTTCTTAGCA
JMSF043H24+           TTAATGTGGATGGTAAGTGTTGACTATTATATACTAATGTTTGATTGAGACTTCTTAGCA
                      ____________________________________________________________
consensus             TTAATGTGGATGGTAAGTGTTGACTATTATATACTAATGTTTGATTGAGACTTCTTAGCA
 
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JMSF033M23+           TGTGTACTACTTGGTATCTCTATATATACTTCATTTAAGAATGCAACATGTACACTATAT
JMSF039P09+           TGTGTACTACTTGGTATCTCTATATATACTTCATTTAAGAATGCAACATGTACACTATAT
JMSF043H24+           TGTGTACTACTTGGTATCTCTATATATACTTCATTTAAGAATGCAACATGTACACTATAT
                      ____________________________________________________________
consensus             TGTGTACTACTTGGTATCTCTATATATACTTCATTTAAGAATGCAACATGTACACTATAT
 
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JMSF033M23+           ATTCATTCCAAACGAGAACTTCTGCAAGTTTTTAGCTAACAATTACAACAATGAAAAAAT
JMSF039P09+           ATTCATTCCAAACGAGAACTTCTGCAAGTTTTTAGCTAACAATTACAACAATGAAAAAAT
JMSF043H24+           ATTCATTCCAAACGAGAACTTCTGCAAGTTTTTAGCTAACAATTACAACAATGAAAAAAT
                      ____________________________________________________________
consensus             ATTCATTCCAAACGAGAACTTCTGCAAGTTTTTAGCTAACAATTACAACAATGAAAAAAT
 
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JMSF033M23+           TGACTAGCTCAACTATCATTCGTGGAAAAAGAAAGCTTGATGTTGAAGATAAAGGTAAAA
JMSF039P09+           TGACTAGCTCAACTATCATTCGTGGAAAAAG-AAGCTTGATGTTGAAGATAAAGGTAAAA
rJMSF043K22+                            TTCGTGGAAAAAGAAAGNNNGATGTTGAAGATAAAGGTAAAA
JMSF043H24+           TGACTAGCTCAACTATCATTCGTGGAAAAAGAAAGCTTGATGTTGAAGATAAAGGTAAAA
                      ____________________________________________________________
consensus             TGACTAGCTCAACTATCATTCGTGGAAAAAGAAAGCTTGATGTTGAAGATAAAGGTAAAA
 
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JMSF033M23+           ATGAAACATACCTGTTGTTCTTCATTAAAATTGTAACAAATGCTAACTTACTTTTTTGGT
JMSF039P09+           ATGAAACATACCTGTTGTTCTTCATTAAAATTGTAACAAATGCTAACTTACTTTTTTGGT
rJMSF043K22+          ATGNAACATACCNGNTGTTTTTCNNTAAAATTGTAACNAATGCTAACTTACTTTTNTGGT
JMSF043H24+           ATGAAACATACCTGTTGTTCTTCATTAAAATTGTAACAAATGCTAACTTACTTTTTTGGT
                      ____________________________________________________________
consensus             ATGAAACATACCTGTTGTTCTTCATTAAAATTGTAACAAATGCTAACTTACTTTTTTGGT
 
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JMSF033M23+           TTGCAATACTCATCTTCTTTGCTTTCCATTTGTGTTCTATATCTGCACCAATTTGGCTCC
JMSF039P09+           TTGCAATACTCATCTTCTTTGCTTTCCATTTGTGTTCTATATCTGCACCAATTTGGCTCC
rJMSF043K22+          TTGCAATACTCATNTTCTTTGCTTTCCNTTTGTGTTNTATATNTGCNCCAATTTGGCTCC
JMSF043H24+           TTGCAATACTCATCTTCTTTGCTTTCCATTTGTGTTCTATATCTGCACCAATTTGGCTCC
                      ____________________________________________________________
consensus             TTGCAATACTCATCTTCTTTGCTTTCCATTTGTGTTCTATATCTGCACCAATTTGGCTCC
 
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JMSF033M23+           CTTTTATCTGTTTTTTGGTCTGTGTATTGAGAGAGTGTAAATGCAGCACTCTCATGTACA
JMSF039P09+           CTTTTATCTGTTTTTTGGTCTGTGTATTGAGAGAGTGTAAATGCAGCACTCTCATGTACA
rJMSF043K22+          C-TCNATCTGTTTTTTGGTCTGNGTATTGAGAGAGTGTAAATGCAGC             
JMSF043H24+           CTTTTATCTGTTTTTTGGTCTGTGTATTGAGAGAGTGTAAATGCAGCACTCTCATGTACA
                      ____________________________________________________________
consensus             CTTTTATCTGTTTTTTGGTCTGTGTATTGAGAGAGTGTAAATGCAGCACTCTCATGTACA
 
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JMSF033M23+           CC                                                          
JMSF039P09+           CC                                                          
JMSF043H24+           CCGTCAGAAAGAATCTTTATCTATATCCATGGAAGACGATGCTCCTTAATCAACACAGTC
                      ____________________________________________________________
consensus             CCGTCAGAAAGAATCTTTATCTATATCCATGGAAGACGATGCTCCTTAATCAACACAGTC
 
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JMSF043H24+           TAGGATTCAGACTGTACGGAATATTTAGAAGATGTTTTGGGATGGTGAAGCGAGGGAATT
                      ____________________________________________________________
consensus             TAGGATTCAGACTGTACGGAATATTTAGAAGATGTTTTGGGATGGTGAAGCGAGGGAATT
 
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JMSF043H24+           AGAAGAAGGTAGGTAGTCTTAGCGTTAAGGAGGAGACTGAAAGACAGGCTGCAACAGTTC
                      ____________________________________________________________
consensus             AGAAGAAGGTAGGTAGTCTTAGCGTTAAGGAGGAGACTGAAAGACAGGCTGCAACAGTTC
 
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JMSF043H24+           TCGGATAGAAACAAGGTGGACAGAGACGGAGATGTTCAGACAAGGGAGGGCATGCATCTC
                      ____________________________________________________________
consensus             TCGGATAGAAACAAGGTGGACAGAGACGGAGATGTTCAGACAAGGGAGGGCATGCATCTC