Contig 012139:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042H09-                       AACTGAATAATGTAAATTCTGCTACAATATGGTATTGAAAGTCGGTG
                      ____________________________________________________________
consensus                          AACTGAATAATGTAAATTCTGCTACAATATGGTATTGAAAGTCGGTG
 
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rJMFF027O23-                TATAATTCATGGAGCTCTTGAACTTTACAAAGGCATCTGATCATAACCCTGAAA
rJMSF042H09-          TATTCATATAATTCATGGAGCTCTTGAACTTTACAAAGGCATCTGATCATAACCCTGAAA
                      ____________________________________________________________
consensus             TATTCATATAATTCATGGAGCTCTTGAACTTTACAAAGGCATCTGATCATAACCCTGAAA
 
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rJMFF027O23-          CCCAGAGCTTAGCAAGCAGGTGGTGTACAATTTAGGAGACCACATTGACATTTTGATTAG
rJMSF042H09-          CCCAGAGCTTAGCAAGCAGGTGGTGTACAATTTAGGAGACCACATTGACATTTTGATTAG
                      ____________________________________________________________
consensus             CCCAGAGCTTAGCAAGCAGGTGGTGTACAATTTAGGAGACCACATTGACATTTTGATTAG
 
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rJMFF027O23-          AGGAAAAAGATTCTAAGCAACGTTGTATGATAGAATTCACCAAAAATTCCCCTGAATATT
rJMSF042H09-          AGGAAAAAGATTCTAAGCAACGTTGTATGATAGAATTCACCAAAAATTCCCCTGAATATT
                      ____________________________________________________________
consensus             AGGAAAAAGATTCTAAGCAACGTTGTATGATAGAATTCACCAAAAATTCCCCTGAATATT
 
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rJMFF027O23-          ATTGTATCTGCTTTACAGCATATCCTGCTATATGGCACTGTGTCTTTTAAATATGGAAGA
rJMSF042H09-          ATTGTATCTGCTTTACAGCATATCCTGCTATATGGCACTGTGTCTTTTAAATATGGAAGA
                      ____________________________________________________________
consensus             ATTGTATCTGCTTTACAGCATATCCTGCTATATGGCACTGTGTCTTTTAAATATGGAAGA
 
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rJMFF027O23-          ATTGCAATTATCTAGCTTGATCCACGTTTAACACATTCTTCAGCCCGTGTGAGTGCATCT
rJMSF042H09-          ATTGCAATTATCTAGCTTGATCCACGTTTAACACATTCTTCAGCCCGTGTGAGTGCATCT
                      ____________________________________________________________
consensus             ATTGCAATTATCTAGCTTGATCCACGTTTAACACATTCTTCAGCCCGTGTGAGTGCATCT
 
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rJMFF027O23-          GAGAAAACATCAGCTGTCCAGTCCTTCACATCCTCCAAGTGGATGGGCTCCCCAGTCCTT
rJMSF042H09-          GAGAAAACATCAGCTGTCCAGTCCTTCACATCCTCCAAGTGGATGGGCTCCCCAGTCCTT
                      ____________________________________________________________
consensus             GAGAAAACATCAGCTGTCCAGTCCTTCACATCCTCCAAGTGGATGGGCTCCCCAGTCCTT
 
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rJMFF027O23-          ATGCGTGCATTGGGACGTGCAAGTGTAGATTCAAATGGAGTCCTTGGCCGCACTTCTTGA
rJMSF042H09-          ATGCGTGCATTGGGACGTGCAAGTGTAGATTCAAATGGAGTCCTTGGCCGCACTTCTTGA
                      ____________________________________________________________
consensus             ATGCGTGCATTGGGACGTGCAAGTGTAGATTCAAATGGAGTCCTTGGCCGCACTTCTTGA
 
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rJMFF027O23-          ATTGCATCCCATTCCTCGCGGGTGAGCATCCTTACTGTCCCAAAACCTTCAGGGGCATTC
rJMSF042H09-          ATTGCATCCCATTCCTCGCGGGTGAGCATCCTTACTGTCCCAAAACCTTCAGGGGCATTC
                      ____________________________________________________________
consensus             ATTGCATCCCATTCCTCGCGGGTGAGCATCCTTACTGTCCCAAAACCTTCAGGGGCATTC
 
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rJMFF027O23-          TTAATATTCTCCTCAATTGTCTCTTGAGACTTTGAGTCATCATAC               
rJMSF042H09-          TTAATATTCTCCTCAATTGTCTCTTGAGACTTTGAGTCATCATACTACAAAAATGAACAG
JMSF042H09+                                             AGTCATCATACTACAAAAATGAACAG
                      ____________________________________________________________
consensus             TTAATATTCTCCTCAATTGTCTCTTGAGACTTTGAGTCATCATACTACAAAAATGAACAG
 
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rJMSF042H09-          CATCCTAAAACCATTAATTCCAACTAAAAAATCACATAAATTATTTAGAAATTATACTTT
JMSF042H09+           CATCCTAAAACCATTAATTCCAACTAAAAAATCACATAAATTATTTAGAAATTATACTTT
                      ____________________________________________________________
consensus             CATCCTAAAACCATTAATTCCAACTAAAAAATCACATAAATTATTTAGAAATTATACTTT
 
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rJMSF042H09-          TATTCCTTAAACAATCTAGGATGGTGTCATGGTTGTTTGTAGAGGGAATTGCTTAAAGAC
JMSF042H09+           TATTCCTTAAACAATCTAGGATGGTGTCATGGTTGTTTGTAGAGGGAATTGCTTAAAGAC
                      ____________________________________________________________
consensus             TATTCCTTAAACAATCTAGGATGGTGTCATGGTTGTTTGTAGAGGGAATTGCTTAAAGAC
 
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rJMSF042H09-          TAGTCATCCAGATTAGGATTTTTGCAGTTTCATTAAGCCAGACAATTAGGGAAAGTCAGT
JMSF042H09+           TAGTCATCCAGATTAGGATTTTTGCAGTTTCATTAAGCCAGACAATTAGGGAAAGTCAGT
                      ____________________________________________________________
consensus             TAGTCATCCAGATTAGGATTTTTGCAGTTTCATTAAGCCAGACAATTAGGGAAAGTCAGT
 
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rJMSF042H09-          CACAAATAAAGATTAATCAGTGAAATTACAGAAACTGATTTCGAAACATATCCTTGTCTT
JMSF042H09+           CACAAATAAAGATTAATCAGTGAAATTACAGAAACTGATTTCGAAACATATCCTTGTCTT
                      ____________________________________________________________
consensus             CACAAATAAAGATTAATCAGTGAAATTACAGAAACTGATTTCGAAACATATCCTTGTCTT
 
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rJMSF042H09-          CTG                                                         
JMFF027O23+                                      CGTCATCAAGATCTTTGCAACAACAGCAGACCC
JMSF042H09+           CTGAGATGCAACTTAACTTAGCCATACCGTCATCAAGATCTTTGCAACAACAGCAGACCC
                      ____________________________________________________________
consensus             CTGAGATGCAACTTAACTTAGCCATACCGTCATCAAGATCTTTGCAACAACAGCAGACCC
 
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JMFF027O23+           AACAGCGATGAGTATCATCGGCATGGTGGGAGTGTCCAGCCATTCCATTGAGTCCGGCAC
JMSF042H09+           AACAGCGATGAGTATCATCGGCATGGTGGGAGTGTCCAGCCATTCCATTGAGTCCGGCAC
                      ____________________________________________________________
consensus             AACAGCGATGAGTATCATCGGCATGGTGGGAGTGTCCAGCCATTCCATTGAGTCCGGCAC
 
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JMFF027O23+           CCTGATAAACATTTGATTCTTCCGGGCGCTCTTGCCTTTCCTCTTCCTTTCAATTTCAGC
JMSF042H09+           CCTGATAAACATTTGATTCTTCCGGGCGCTCTTGCCTTTCCTCTTCCTTTCAATTTCAGC
                      ____________________________________________________________
consensus             CCTGATAAACATTTGATTCTTCCGGGCGCTCTTGCCTTTCCTCTTCCTTTCAATTTCAGC
 
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JMFF027O23+           AACCTTTTTCTTCAAGTTCTCGCTGGGACCTTCCCAGGTTTTTGTATGCACTTGCCTCCA
JMSF042H09+           AACCTTTTTCTTCAAGTTCTCGCTGGGACCTTCCCAGGTTTTTGTATGCACTTGCCTCCA
                      ____________________________________________________________
consensus             AACCTTTTTCTTCAAGTTCTCGCTGGGACCTTCCCAGGTTTTTGTATGCACTTGCCTCCA
 
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JMFF027O23+           AAGCCCGTGCACGGCTCTACGAACCCCAATCATGACTCAAGAGGAGAAATCAATCCAATT
JMSF042H09+           AAGCCCGTGCACGGCTCTACGAACCCCAATCATGACTCAAGAGGAGAAATCAATCCAATT
                      ____________________________________________________________
consensus             AAGCCCGTGCACGGCTCTACGAACCCCAATCATGACTCAAGAGGAGAAATCAATCCAATT
 
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JMFF027O23+           GTACCAACTTTTACTGCGGATTGAAAAAATGAAAAGGTTTTGGATGAGAATATCCCGCTT
JMSF042H09+           GTACCAACTTTTACTGCGGATTGAAAAAATGAAAAGGTTTTGGATGAGAATATCCCGCTT
                      ____________________________________________________________
consensus             GTACCAACTTTTACTGCGGATTGAAAAAATGAAAAGGTTTTGGATGAGAATATCCCGCTT
 
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JMFF027O23+           GAGAATTTCGTCGAACACCTTAACTG                                  
JMSF042H09+           GAGAATTTCGTCGAACACCTTAACTGCAGCGCGAAGACAGCAATCGCTTTCAGAAATTTT
                      ____________________________________________________________
consensus             GAGAATTTCGTCGAACACCTTAACTGCAGCGCGAAGACAGCAATCGCTTTCAGAAATTTT
 
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JMSF042H09+           GAGAACCAAAGAATTACAAGTAGGATATGGAGATGCTCATTCTCATGCTCGGCATATAGA
                      ____________________________________________________________
consensus             GAGAACCAAAGAATTACAAGTAGGATATGGAGATGCTCATTCTCATGCTCGGCATATAGA
 
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JMSF042H09+           ATGTGTTCAGAGAGCGTTTGCGAGGGATTCCTACTTACCTGTAGACTGTAAACCTCACTC
                      ____________________________________________________________
consensus             ATGTGTTCAGAGAGCGTTTGCGAGGGATTCCTACTTACCTGTAGACTGTAAACCTCACTC