Contig 012135:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042B10Sequence780012135 (2)ref|XP_004248211.1|2e-161PREDICTED: protein MEI2-like 2 [Solanum lycopersicum] ref|XP_010327098.1| PREDIC
JMSF042N06Sequence102005087 (2)568012135 (2)ref|XP_006360001.1|3e-77PREDICTED: protein MEI2-like 2-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF042N06+                              AATTGAGGACCAGANAGCGTTCCAATTCCAGATGGNTGAT
                      ____________________________________________________________
consensus                                 AATTGAGGACCAGANAGCGTTCCAATTCCAGATGGNTGAT
 
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rJMSF042N06+          TTACATGGCTAACCCGTCCGGGCTCTTTACCAATGGGTGTAATCTTCACCGGGTTTGAGA
                      ____________________________________________________________
consensus             TTACATGGCTAACCCGTCCGGGCTCTTTACCAATGGGTGTAATCTTCACCGGGTTTGAGA
 
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rJMSF042N06+          GGTGGGCGGGAAGGATCGAGGCAAGCCCCGACATATGACTGCTGTTTACAGGGCTAAGAT
                      ____________________________________________________________
consensus             GGTGGGCGGGAAGGATCGAGGCAAGCCCCGACATATGACTGCTGTTTACAGGGCTAAGAT
 
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rJMSF042N06+          TTCTCAAACCCGGAGATNGACTGTAATTATGCAACGGANTCGGCTCGACCGGACTGCCAA
                      ____________________________________________________________
consensus             TTCTCAAACCCGGAGATNGACTGTAATTATGCAACGGANTCGGCTCGACCGGACTGCCAA
 
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rJMSF042N06+          AATTTGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
JMSF042B10+           AATTNGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
                      ____________________________________________________________
consensus             AATTTGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
 
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rJMSF042N06+          TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGNTGTNGCNTCAAGTTTNGACGGGCTC
JMSF042B10+           TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGTTGTTGCATCAAGTTTCGACGGGCTC
                      ____________________________________________________________
consensus             TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGTTGTTGCATCAAGTTTCGACGGGCTC
 
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rJMSF042N06+          CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCNTNTTTAAAG
JMSF042B10+           CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCCTATTTAAAG
                      ____________________________________________________________
consensus             CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCCTATTTAAAG
 
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rJMSF042N06+          CTNTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAANTCAATGAACTTATGGNGTCGCT
JMSF042B10+           CTTTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAACTCAATGAACTTATGGTGTCGCT
                      ____________________________________________________________
consensus             CTTTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAACTCAATGAACTTATGGTGTCGCT
 
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rJMSF042N06+          TATGTGGTGTCTCCCTNATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
JMSF042B10+           TATGTGGTGTCTCCCTTATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
                      ____________________________________________________________
consensus             TATGTGGTGTCTCCCTTATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
 
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rJMSF042N06+          CTTCATTAGATACCGAAGGATCCAAATTGAACACAA                        
JMSF042B10+           CTTCATTAGATACCGAAGGATCCAAATTGAACACAACAAGTGTTCCTTGGTTAATGTCTT
                      ____________________________________________________________
consensus             CTTCATTAGATACCGAAGGATCCAAATTGAACACAACAAGTGTTCCTTGGTTAATGTCTT
 
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JMSF042B10+           TCTCCGATGGATTTTCCTTTGGGATTGAAAAATGAATATCAAGTTTTCTTCGCCGTAAAG
                      ____________________________________________________________
consensus             TCTCCGATGGATTTTCCTTTGGGATTGAAAAATGAATATCAAGTTTTCTTCGCCGTAAAG
 
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JMSF042B10+           GCTTATTTTGCAGAGCACGCATCGCAGTTCGAGCAGCTCGGATATCATAGTAAGATATCA
                      ____________________________________________________________
consensus             GCTTATTTTGCAGAGCACGCATCGCAGTTCGAGCAGCTCGGATATCATAGTAAGATATCA
 
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JMSF042B10+           TCACAAATCCTCGGTGCTTGCATGCAGTATATAAGGTTCTGATATCGCCATATTGCTCGA
                      ____________________________________________________________
consensus             TCACAAATCCTCGGTGCTTGCATGCAGTATATAAGGTTCTGATATCGCCATATTGCTCGA
 
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JMSF042B10+           ATAGAGATTTTAATTCGCTGTCTTCTACATTGCTGTTAATATTTCTAACAAACAATGTCC
                      ____________________________________________________________
consensus             ATAGAGATTTTAATTCGCTGTCTTCTACATTGCTGTTAATATTTCTAACAAACAATGTCC
 
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JMSF042B10+           TCGAAGGGTGCTCTCCGTACGGGTGTTCCCCAGCAACTGTTCCTGCACCGTTTGAATAGC
                      ____________________________________________________________
consensus             TCGAAGGGTGCTCTCCGTACGGGTGTTCCCCAGCAACTGTTCCTGCACCGTTTGAATAGC
 
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JMSF042B10+           CATAATGTGCAATACTGCTTCCAGGAGACATACTTAACTTGGCAAAGCCGTTAAATAGAT
                      ____________________________________________________________
consensus             CATAATGTGCAATACTGCTTCCAGGAGACATACTTAACTTGGCAAAGCCGTTAAATAGAT
 
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JMSF042B10+           TCTCTTGGGACTCGGGTTCCATTTCAAATCCTCCCCCGCCAAATAGATCGTCCTCTAACT
                      ____________________________________________________________
consensus             TCTCTTGGGACTCGGGTTCCATTTCAAATCCTCCCCCGCCAAATAGATCGTCCTCTAACT