Contig 012134:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS109F03Sequence627012134 (3)ref|XP_009601294.1|8e-38PREDICTED: uncharacterized protein LOC104096614 isoform X3 [Nicotiana tomentosi
JMSF012L11Sequence491012134 (3)ref|XP_009601294.1|2e-28PREDICTED: uncharacterized protein LOC104096614 isoform X3 [Nicotiana tomentosi740004361 (2)ref|XP_006360715.1|283PREDICTED: uncharacterized protein LOC102580131 [Solanum tuberosum]
JMSF042A14Sequence459012134 (3)ref|XP_009601294.1|8e-06PREDICTED: uncharacterized protein LOC104096614 isoform X3 [Nicotiana tomentosi654004361 (2)ref|XP_010053139.1|117PREDICTED: uncharacterized protein LOC104441662 [Eucalyptus grandis] gb|KCW77397

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF012L11+ TCAAAGGACAGACCT
JMFS109F03+ ATATTGTGTAGGTATTCACATCCGGCCTTGACCACTTCCATTTCTCAAAGGACAGACCT
                      ____________________________________________________________
consensus ATATTGTGTAGGTATTCACATCCGGCCTTGACCACTTCCATTTCTCAAAGGACAGACCT
 
. : . : . : . : . : . :
JMSF012L11+ TTCTGATTAACATCAGGATCAAAGGAGGAGCGCATAGCTTGGAAAACAGAGAGAGCCAAG
JMFS109F03+ TTCTGATTAACATCAGGATCAAAGGAGGAGCGCATAGCTTGGAAAACAGAGAGAGCCAAG
                      ____________________________________________________________
consensus TTCTGATTAACATCAGGATCAAAGGAGGAGCGCATAGCTTGGAAAACAGAGAGAGCCAAG
 
. : . : . : . : . : . :
JMSF012L11+ TCAGCATTGCTACGATCAAGCGCGGCAGATATGATCAAGGAGCAATCGGAAGAGCTTACG
JMFS109F03+ TCAGCATTGCTACGATCAAGCGCGGCAGATATGATCAAGGAGCAATCGGAAGAGCTTACG
                      ____________________________________________________________
consensus TCAGCATTGCTACGATCAAGCGCGGCAGATATGATCAAGGAGCAATCGGAAGAGCTTACG
 
. : . : . : . : . : . :
JMSF012L11+ GTGCCGCCGCTCCTCAGAGTCGACTCCGCAATGATGTTGAGAACTTCGTTGGCATCCGCG
JMFS109F03+ GTGCCGCCGCTCCTCAGAGTCGACTCCGCAATGATGTTGAGAACTTCGTTGGCATCCGCG
JMSF042A14+ GACTCCGCAATGATGTTGAGAACTTCGTTGGCATCCGCG
                      ____________________________________________________________
consensus GTGCCGCCGCTCCTCAGAGTCGACTCCGCAATGATGTTGAGAACTTCGTTGGCATCCGCG
 
. : . : . : . : . : . :
JMSF012L11+ GCGGTGGAGACTCGGCGTAGCAATTCGTCGTCCAACAGCCGCGACGCCTCACTGTCATTA
JMFS109F03+ GCGGTGGAGACTCGGCGTAGCAATTCGTCGTCCAACAGCCGCGACGCCTCACTGTCATTA
JMSF042A14+ GCGGTGGAGACTCGGCGTAGCAATTCGTCGTCCAACAGCCGCGACGCCTCACTGTCATTA
                      ____________________________________________________________
consensus GCGGTGGAGACTCGGCGTAGCAATTCGTCGTCCAACAGCCGCGACGCCTCACTGTCATTA
 
. : . : . : . : . : . :
JMSF012L11+ GCCGCCTCACTCAAAGCAGCTCTGGTCTTAAAGCTGCAAAAACTGTTGCGAGAACAGCAG
JMFS109F03+ GCCGCCTCACTCAAAGCAGCTCTGGTCTTAAAGCTGCAAAAACTGTTGCGAGAACAGCAG
JMSF042A14+ GCCGCCTCACTCAAAGCAGCTCTGGTCTTAAAGCTGCAAAAACTGTTGCGAGAACAGCAG
                      ____________________________________________________________
consensus GCCGCCTCACTCAAAGCAGCTCTGGTCTTAAAGCTGCAAAAACTGTTGCGAGAACAGCAG
 
. : . : . : . : . : . :
JMSF012L11+ GATAACGCACGGTTACCGGGAAGGCGGCGGCGGAAGAAGAGATAGAAGAGAGCACCGGTG
JMFS109F03+ GATAACGCACGGTTACCGGGAAGGCGGCGGCGGAAGAAGAGATAGAAGAGAGCACCGGTG
JMSF042A14+ GATAACGCACGGTTACCGGGAAGGCGGCGGCGGAAGAAGAGATAGAAGAGAGCACCGGTG
                      ____________________________________________________________
consensus GATAACGCACGGTTACCGGGAAGGCGGCGGCGGAAGAAGAGATAGAAGAGAGCACCGGTG
 
. : . : . : . : . : . :
JMSF012L11+ CCTGTGACGGAGAATCTCTGAGGGAAACAGGAGAGACAAGCAGGGGAGCTCAACTTGATA
JMFS109F03+ CCTGTGACGGAGAATCTCTGAGGGAAACAGGAGAGACAAGCAGGGGAGCTCAACTTGATA
JMSF042A14+ CCTGTGACGGAGAATCTCTGAGGGAAACAGGAGAGACAAGCAGGGGAGCTCAACTTGATA
                      ____________________________________________________________
consensus CCTGTGACGGAGAATCTCTGAGGGAAACAGGAGAGACAAGCAGGGGAGCTCAACTTGATA
 
. : . : . : . : . : . :
JMSF012L11+ CTCATATGTAATGTAACGTCTTGAATATTAGCATACAATACAGTAATCAACCACT
JMFS109F03+ CTCATATGTAATGTAACGTCTTGAATATTAGCATACAATACAGTAATCAACCACTGCAAA
JMSF042A14+ CTCATATGTAATGTAACGTCTTGAATATTAGCATACAATACAGTAATCAACCACTGCAAA
                      ____________________________________________________________
consensus CTCATATGTAATGTAACGTCTTGAATATTAGCATACAATACAGTAATCAACCACTGCAAA
 
. : . : . : . : . : . :
JMFS109F03+ TTTTATAATTTTTTTTGTTGAAAAATGGGGATAGAAGCAGTTGGGAGAGGGTGATTCTGT
JMSF042A14+ TTTTATAATTTTTTTTGTTGAAAAATGGGGATAGAAGCAGTTGGGAGAGGGTGATTCTGT
                      ____________________________________________________________
consensus TTTTATAATTTTTTTTGTTGAAAAATGGGGATAGAAGCAGTTGGGAGAGGGTGATTCTGT
 
. : . : . : . : . : . :
JMFS109F03+ GTTTGTGTAAGGGAGGGAGGGTTTCTTA
JMSF042A14+ GTTTGTGTAAGGGAGGGAGGGTTTCTTACAGATTAGGAACGAGAGGTGGCTGTTGGTACC
                      ____________________________________________________________
consensus GTTTGTGTAAGGGAGGGAGGGTTTCTTACAGATTAGGAACGAGAGGTGGCTGTTGGTACC