Contig 012132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027F07Sequence327012132 (3)ref|XP_009621480.1|2e-22PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform768009709 (3)ref|XP_009621480.1|8e-54PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform
JMSF041N01Sequence750012132 (3)ref|XP_006341036.1|3e-116PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum]671009709 (3)ref|XP_009621480.1|9e-43PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform
JMSF043I15Sequence780012132 (3)ref|XP_006341036.1|5e-125PREDICTED: putative E3 ubiquitin-protein ligase XBAT31-like [Solanum tuberosum]690009709 (3)ref|XP_009621480.1|2e-48PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043I15+ CCCCA
                      ____________________________________________________________
consensus CCCCA
 
. : . : . : . : . : . :
JMSF043I15+ AGCAAGTAATTCTCGAACACAGTCCAAGGAACCTGCCCGAGCTGCCAAATGAAGAGGCGT
JMSF041N01+ ACCTGCCCGAGCTGCCAAATGAAGAGGCGT
                      ____________________________________________________________
consensus AGCAAGTAATTCTCGAACACAGTCCAAGGAACCTGCCCGAGCTGCCAAATGAAGAGGCGT
 
. : . : . : . : . : . :
JMSF043I15+ GCATCCTGGGTAGCCATATCCACCGGTTGAAGCACACACAAGAGCTTCGTTGCTTAGCAA
JMSF041N01+ GCATCCTGGGTAGCCATATCCACCGGTTGAAGCACACACAAGAGCTTCGTTGCTTAGCAA
                      ____________________________________________________________
consensus GCATCCTGGGTAGCCATATCCACCGGTTGAAGCACACACAAGAGCTTCGTTGCTTAGCAA
 
. : . : . : . : . : . :
JMSF043I15+ AAGACGAACACATTCTGGCCTTCTGTGTCGGGCTGCTAAGTGCAGGGAGGTTGCACCACT
JMSF041N01+ AAGACGAACACATTCTGGCCTTCTGTGTCGGGCTGCTAAGTGCAGGGAGGTTGCACCACT
                      ____________________________________________________________
consensus AAGACGAACACATTCTGGCCTTCTGTGTCGGGCTGCTAAGTGCAGGGAGGTTGCACCACT
 
. : . : . : . : . : . :
JMSF043I15+ TCCATCCCTCGTGTTGACATATCGTGCAAATCCCCAGGATTGTGCCACGTGGGCAGAATG
JMSF041N01+ TCCATCCCTCGTGTTGACATATCGTGCAAATCCCCAGGATTGTGCCACGTGGGCAGAATG
                      ____________________________________________________________
consensus TCCATCCCTCGTGTTGACATATCGTGCAAATCCCCAGGATTGTGCCACGTGGGCAGAATG
 
. : . : . : . : . : . :
JMSF043I15+ TGCAGCAGAGAGGATAGATTGCAGGCAATCAGAGTGGCCATAGTATGCAGCATAATGCAA
JMSF041N01+ TGCAGCAGAGAGGATAGATTGCAGGCAATCAGAGTGGCCATAGTATGCAGCATAATGCAA
                      ____________________________________________________________
consensus TGCAGCAGAGAGGATAGATTGCAGGCAATCAGAGTGGCCATAGTATGCAGCATAATGCAA
 
. : . : . : . : . : . :
JMSF043I15+ ACAGGTTCTTCCATGTAGTGAATCAAACATTAAAATATTTGCTCCTGCCTGGAGTAGCCT
JMSF041N01+ ACAGGTTCTTCCATGTAGTGAATCAAACATTAAAATATTTGCTCCTGCCTGGAGTAGCCT
                      ____________________________________________________________
consensus ACAGGTTCTTCCATGTAGTGAATCAAACATTAAAATATTTGCTCCTGCCTGGAGTAGCCT
 
. : . : . : . : . : . :
JMSF043I15+ TTCCACACAGGAAAGCTTTCCATGAATAGCAGCTAGCATCAATGGGGTCTGTTTGTGGCG
JMSF041N01+ TTCCACACAGGAAAGCTTTCCATGAATAGCAGCTAGCATCAATGGGGTCTGTTTGTGGCG
                      ____________________________________________________________
consensus TTCCACACAGGAAAGCTTTCCATGAATAGCAGCTAGCATCAATGGGGTCTGTTTGTGGCG
 
. : . : . : . : . : . :
JMSF043I15+ ATTCAAGATGTCTGGATTTAAACCCTTATCCAAAAGCATACAGAGAATCTCGATCTGCCC
JMFF027F07+ CAAAAGCATACAGAGAATCTCGATNTGCCC
JMSF041N01+ ATTCAAGATGTCTGGATTTAAACCCTTATCCAAAAGCATACAGAGAATCTCGATCTGCCC
                      ____________________________________________________________
consensus ATTCAAGATGTCTGGATTTAAACCCTTATCCAAAAGCATACAGAGAATCTCGATCTGCCC
 
. : . : . : . : . : . :
JMSF043I15+ ATTGGCTGCTGCCACATGCAATGCAGAGAGCTTCCCATGAACAGCGGTGAACCTTAGCAC
JMFF027F07+ ATTGGCTGNTGCCACATGCAATGCAGAGAGCTTCCCATGAACAGCGGTGAACCTTAGCAC
JMSF041N01+ ATTGGCTGCTGCCACATGCAATGCAGAGAGCTTCCCATGAACAGCGGTGAACCTTAGCAC
                      ____________________________________________________________
consensus ATTGGCTGCTGCCACATGCAATGCAGAGAGCTTCCCATGAACAGCGGTGAACCTTAGCAC
 
. : . : . : . : . : . :
JMSF043I15+ ACTCGGGTCCTCATCAACCATGGCCTCAACTGTTTCAAGCTCCCCATTTTGGACGGCTGT
JMFF027F07+ ACTCGGGTCCTCATCAACCATGGCCTCAACTGTTTCAAGCTCCCCATTTTGGACGGCTGT
JMSF041N01+ ACTCGGGTCCTCATCAACCATGGCCTCAACTGTTTCAAGCTCCCCATTTTGGACGGCTGT
                      ____________________________________________________________
consensus ACTCGGGTCCTCATCAACCATGGCCTCAACTGTTTCAAGCTCCCCATTTTGGACGGCTGT
 
. : . : . : . : . : . :
JMSF043I15+ GAAGAACCCATGTTCATGGGTTTCTCTGCAGCTCAATCTCTGCCCCATCGCCGCCAAAGC
JMFF027F07+ GAAGAACCCATGTTCATGGGTTTCTCTGCAGCTCAATCTCTGCCCCATCGCCGCCAAAGC
JMSF041N01+ GAAGAACCCATGTTCATGGGTTTCTCTGCAGCTCAATCTCTGCCCCATCGCCGCCAAAGC
                      ____________________________________________________________
consensus GAAGAACCCATGTTCATGGGTTTCTCTGCAGCTCAATCTCTGCCCCATCGCCGCCAAAGC
 
. : . : . : . : . : . :
JMSF043I15+ CTTCAGCTCACAGCATTTAGGTGAAGTGCTGAGATGATTTCTTGACGCGCCACCCGGCAG
JMFF027F07+ CTTCAGCTCACAGCATTTAGGTGAAGTGCTGAGATGATTTCTTGACGCGCCACCCGGCAG
JMSF041N01+ CTTCAGCTCACAGCATTTAGGTGAAGTGCTGAGATGATTTCTTGACGCGCCACCCGGCAG
                      ____________________________________________________________
consensus CTTCAGCTCACAGCATTTAGGTGAAGTGCTGAGATGATTTCTTGACGCGCCACCCGGCAG
 
. : . : . : . : . : . :
JMSF043I15+ GGCGGAGGGAGCGGCAATGGGATGGTGGTGCAGAGA
JMFF027F07+ GGCGGAGGGAGCGGCAATGGGATGGTGGTGCAGAGA
JMSF041N01+ GGCGGAGGGAGCGGCAATGGGATGGTGGTGCAGAGAGTGGATGATGGGGGGTTGGGAACC
                      ____________________________________________________________
consensus GGCGGAGGGAGCGGCAATGGGATGGTGGTGCAGAGAGTGGATGATGGGGGGTTGGGAACC