Contig 012128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044F12Sequence635012128 (6)ref|XP_006355864.1|292PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]604012128 (6)emb|CDP03608.1|9e-18unnamed protein product [Coffea canephora]
JMSF029F10Sequence585012128 (6)ref|XP_006355864.1|291PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]789012128 (6)ref|XP_009594395.1|2e-57PREDICTED: uncharacterized protein LOC104090905 isoform X1 [Nicotiana tomentosi
JMSF041H04Sequence810012128 (6)ref|XP_006355864.1|295PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]565012128 (6)emb|CDP03608.1|2e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF044F12-              CATTCTTGCAATGCAAGTTGCAACTTCAATACTGAAATCCATATACTAACAGTATA
                      ____________________________________________________________
consensus                 CATTCTTGCAATGCAAGTTGCAACTTCAATACTGAAATCCATATACTAACAGTATA
 
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rJMFF044F12-          AATATTTGTTTAGCCATTGTAATAAAACTATAAACAGAAACAACAGAGCTAGCTTGCAGC
rJMSF041H04-                                           ACAGAAACAACAGAGCTAGCTTGCAGC
rJMSF029F10-                            GTAATAAAACGATAAACAGAAACAACAGAGCTAGCTTGCAGC
                      ____________________________________________________________
consensus             AATATTTGTTTAGCCATTGTAATAAAACTATAAACAGAAACAACAGAGCTAGCTTGCAGC
 
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rJMFF044F12-          TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
rJMSF041H04-          TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
rJMSF029F10-          TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
                      ____________________________________________________________
consensus             TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
 
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rJMFF044F12-          ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
rJMSF041H04-          ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
rJMSF029F10-          ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
                      ____________________________________________________________
consensus             ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
 
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rJMFF044F12-          ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
rJMSF041H04-          ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
rJMSF029F10-          ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
                      ____________________________________________________________
consensus             ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
 
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rJMFF044F12-          CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
rJMSF041H04-          CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
rJMSF029F10-          CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
                      ____________________________________________________________
consensus             CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
 
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rJMFF044F12-          GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
rJMSF041H04-          GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
rJMSF029F10-          GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
                      ____________________________________________________________
consensus             GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
 
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rJMFF044F12-          TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
rJMSF041H04-          TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
rJMSF029F10-          TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
                      ____________________________________________________________
consensus             TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
 
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rJMFF044F12-          AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
rJMSF041H04-          AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
rJMSF029F10-          AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
JMSF041H04+                                         CGAGATCAAGTTGTAGTACTCACAAACACC
                      ____________________________________________________________
consensus             AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
 
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rJMFF044F12-          ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA     
rJMSF041H04-          ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
rJMSF029F10-          ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
JMSF041H04+           ATGCAATANCAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCANTCAC
                      ____________________________________________________________
consensus             ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
 
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rJMSF041H04-          CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGA 
rJMSF029F10-          CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMFF044F12+                     GATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMSF029F10+                TCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMSF041H04+           CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
                      ____________________________________________________________
consensus             CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
 
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rJMSF029F10-          AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMFF044F12+           AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMSF029F10+           AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMSF041H04+           AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
                      ____________________________________________________________
consensus             AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
 
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rJMSF029F10-          CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMFF044F12+           CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMSF029F10+           CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMSF041H04+           CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
                      ____________________________________________________________
consensus             CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
 
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rJMSF029F10-          TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGT-CCACTCTCCAAGAT
JMFF044F12+           TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
JMSF029F10+           TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
JMSF041H04+           TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
                      ____________________________________________________________
consensus             TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
 
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rJMSF029F10-          TTGTCATGCAA                                                 
JMFF044F12+           TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
JMSF029F10+           TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
JMSF041H04+           TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
                      ____________________________________________________________
consensus             TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
 
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JMFF044F12+           CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
JMSF029F10+           CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
JMSF041H04+           CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
                      ____________________________________________________________
consensus             CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
 
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JMFF044F12+           ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
JMSF029F10+           ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
JMSF041H04+           ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
                      ____________________________________________________________
consensus             ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
 
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JMFF044F12+           TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
JMSF029F10+           TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
JMSF041H04+           TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
                      ____________________________________________________________
consensus             TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
 
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JMFF044F12+           AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
JMSF029F10+           AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
JMSF041H04+           AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
                      ____________________________________________________________
consensus             AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
 
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JMFF044F12+           CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
JMSF029F10+           CTTCT                                                       
JMSF041H04+           CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
                      ____________________________________________________________
consensus             CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
 
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JMFF044F12+           GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGT               
JMSF041H04+           GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGTAGCGAAGAAGATGGC
                      ____________________________________________________________
consensus             GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGTAGCGAAGAAGATGGC
 
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JMSF041H04+           AGCCAAACAGGACCTTAAATTGCAAGACTAGCAGCAAATGCAGAAGAATATGCCGTGAAC
                      ____________________________________________________________
consensus             AGCCAAACAGGACCTTAAATTGCAAGACTAGCAGCAAATGCAGAAGAATATGCCGTGAAC