Contig 012126:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J14Sequence521012126 (2)ref|XP_009793676.1|2e-60PREDICTED: probable polygalacturonase [Nicotiana sylvestris]707002509 (3)ref|XP_009793676.1|7e-34PREDICTED: probable polygalacturonase [Nicotiana sylvestris]
JMSF041F06Sequence766012126 (2)ref|XP_009793676.1|5e-81PREDICTED: probable polygalacturonase [Nicotiana sylvestris]663002509 (3)ref|XP_006355845.1|5e-28PREDICTED: probable polygalacturonase-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041F06+ TGATGAATTCCACGAGATGGGGGNGANTGTAATTCAAGGCATGNTG
                      ____________________________________________________________
consensus TGATGAATTCCACGAGATGGGGGNGANTGTAATTCAAGGCATGNTG
 
. : . : . : . : . : . :
JMSF041F06+ ATCAAACTGTTCCCACCACACGGCACCNTGCCCGTCAATAGTTCCATTATTGCCTGTTAT
                      ____________________________________________________________
consensus ATCAAACTGTTCCCACCACACGGCACCNTGCCCGTCAATAGTTCCATTATTGCCTGTTAT
 
. : . : . : . : . : . :
JMFF004J14+ GGTACCTC
JMSF041F06+ CACGACATCTGTCACATTGCTTCCGGTAATCAAGNTGCGATATCTTCCACCGGGTACCTC
                      ____________________________________________________________
consensus CACGACATCTGTCACATTGCTTCCGGTAATCAAGNTGCGATATCTTCCACCGGGTACCTC
 
. : . : . : . : . : . :
JMFF004J14+ AATACTTCTCCCATAAGATGGCAAGGGACCAACTACTTCCCAATGACTGTAATCCTCTGA
JMSF041F06+ AATACTTCTCCCATAAGATGGCAAGGGACCAACTACTTCCCAATGACTGTAATCCTCTGA
                      ____________________________________________________________
consensus AATACTTCTCCCATAAGATGGCAAGGGACCAACTACTTCCCAATGACTGTAATCCTCTGA
 
. : . : . : . : . : . :
JMFF004J14+ TCCAAGAATAATGGCATCTTTCTCCAAGAAGAGTGTGAGGTGACTAGTGAGATCAACAGT
JMSF041F06+ TCCAAGAATAATGGCATCTTTCTCCAAGAAGAGTGTGAGGTGACTAGTGAGATCAATAGT
                      ____________________________________________________________
consensus TCCAAGAATAATGGCATCTTTCTCCAAGAAGAGTGTGAGGTGACTAGTGAGATCAATAGT
 
. : . : . : . : . : . :
JMFF004J14+ TCCCGTCAGCCACTTGCCTGCTGGAACATAGAGCTGTGCCCCACCCTTGTCCGTGAAGGA
JMSF041F06+ TCCCGTCAGCCACTTGCCTGCTGGAACATAGAGCTGTGCCCCACCCTTGTCCGTGAAGGA
                      ____________________________________________________________
consensus TCCCGTCAGCCACTTGCCTGCTGGAACATAGAGCTGTGCCCCACCCTTGTCCGTGAAGGA
 
. : . : . : . : . : . :
JMFF004J14+ CTTGAGATAAAATATGGCATTCTGAAACGCTACAGTATTTAATGTTTTCCCATCCCCCAC
JMSF041F06+ CTTGAGATAAAATATGGCATTCTGAAACGCTACAGTATTTAATGTTTTCCCATCCCCCAC
                      ____________________________________________________________
consensus CTTGAGATAAAATATGGCATTCTGAAACGCTACAGTATTTAATGTTTTCCCATCCCCCAC
 
. : . : . : . : . : . :
JMFF004J14+ AGCCCCAAACTCCAATACTGACACACTGTGAGGTCTGGGTTTCAAAGGTTTATTCAACTT
JMSF041F06+ AGCCCCAAACTCCAATACTGACACACTGTGAGGTCTGGGTTTCAAAGGTTTATTCAACTT
                      ____________________________________________________________
consensus AGCCCCAAACTCCAATACTGACACACTGTGAGGTCTGGGTTTCAAAGGTTTATTCAACTT
 
. : . : . : . : . : . :
JMFF004J14+ GCATTCTCCCCCGAATTGAGCTTCAGTGTGTTCTACGCCTTTATTCAGCAACAATATCAA
JMSF041F06+ GCATTCTCCCTCGAATTGAGCTTCAGTGTGTTCTACGCCTTTATTCAGCAACAATATCAA
                      ____________________________________________________________
consensus GCATTCTCCCTCGAATTGAGCTTCAGTGTGTTCTACGCCTTTATTCAGCAACAATATCAA
 
. : . : . : . : . : . :
JMFF004J14+ AATCAGTAATACTAGCGCCTTCATGGGATTTCTCTCTTCTTCTCCCATTGAGCAGTCAAA
JMSF041F06+ AATCAGTAATACTAGCGCCTTCATGGGATTTCTCTCTTCTTCTCCCATTGAGCAGTCAAA
                      ____________________________________________________________
consensus AATCAGTAATACTAGCGCCTTCATGGGATTTCTCTCTTCTTCTCCCATTGAGCAGTCAAA
 
. : . : . : . : . : . :
JMFF004J14+ AAAGTCAGTCCCCCACCGCCCTATAAGAAGCTTCAAACACTTTCGAGCAGAGTGAAGAAG
JMSF041F06+ AAAGTCAGTCCCCCACCGCCCTATAAGAAGCTTCAAACACTTTCGAGCAGAGTGAAGAAG
                      ____________________________________________________________
consensus AAAGTCAGTCCCCCACCGCCCTATAAGAAGCTTCAAACACTTTCGAGCAGAGTGAAGAAG
 
. : . : . : . : . : . :
JMFF004J14+ AAGAAGAAGAGAGGGCGCTTGTAATTTTATGAT
JMSF041F06+ AAGAAGAAGAGAGGGCGCTTGTAATTTTATGATATCGGTGCTATTGCTCATATAATAAGA
                      ____________________________________________________________
consensus AAGAAGAAGAGAGGGCGCTTGTAATTTTATGATATCGGTGCTATTGCTCATATAATAAGA
 
. : . : . : . : . : . :
JMSF041F06+ AGACCATATAGAAACAAATCACCCCGTGATTTGAGACGATCCATATCAACAATATAATCC
                      ____________________________________________________________
consensus AGACCATATAGAAACAAATCACCCCGTGATTTGAGACGATCCATATCAACAATATAATCC