Contig 012125:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS145B03+                                                           CAGGCCAGACAA
                      ____________________________________________________________
consensus                                                             CAGGCCAGACAA
 
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JMFS145B03+           CATATACAGTCACTGCAAATGCAAAGCTCGTCACAGCAAACACTGCTGAAGCAAGGTAGC
                      ____________________________________________________________
consensus             CATATACAGTCACTGCAAATGCAAAGCTCGTCACAGCAAACACTGCTGAAGCAAGGTAGC
 
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JMFS145B03+           TCCCAGCAATTGCTGCAGCTGCTGTCATCAAAGCTGTTAGCATTCCAAGTTCTACCATCA
                      ____________________________________________________________
consensus             TCCCAGCAATTGCTGCAGCTGCTGTCATCAAAGCTGTTAGCATTCCAAGTTCTACCATCA
 
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JMFS145B03+           GTCTAGTTGATATTTTAGATGCCACTGGATGAGGCTGCTCTGGCAATTTTCCAACCCATG
                      ____________________________________________________________
consensus             GTCTAGTTGATATTTTAGATGCCACTGGATGAGGCTGCTCTGGCAATTTTCCAACCCATG
 
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JMFS145B03+           TCATCATTTGCTTCTCAACCTCATACCGTGGCCCAGTGTACTCATTGAGGAGGCTTTGTG
                      ____________________________________________________________
consensus             TCATCATTTGCTTCTCAACCTCATACCGTGGCCCAGTGTACTCATTGAGGAGGCTTTGTG
 
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JMFS145B03+           CTTGATTCAAATCCAGCCTCATTGTCCACTTAGTTCTCTGCAAGCTCTTATGGCCTGGCA
                      ____________________________________________________________
consensus             CTTGATTCAAATCCAGCCTCATTGTCCACTTAGTTCTCTGCAAGCTCTTATGGCCTGGCA
 
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JMFS145B03+           TTTCCTTCAACTCCACCACAAAGTCCCTAAACCCAAATCCATAATTCGCAGCATTATCCT
                      ____________________________________________________________
consensus             TTTCCTTCAACTCCACCACAAAGTCCCTAAACCCAAATCCATAATTCGCAGCATTATCCT
 
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JMFS145B03+           CCTTGAATGTTAACAGTTTAACCTTATCAGTCTTCAAGTACTTCTGAAAATCCTCGAACT
JMSF041D19+                                           TTCAAGTACTTCTGAAAATCCTCGAACT
                      ____________________________________________________________
consensus             CCTTGAATGTTAACAGTTTAACCTTATCAGTCTTCAAGTACTTCTGAAAATCCTCGAACT
 
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JMFS145B03+           CCATTTTCGGTAACTCCTCCACATTCTTCTCAAATTCCTCTTCTTCTGATAAGTTAGACC
JMSF026G07+                                                       TCTGATAAGTTAGACC
JMSF041D19+           CCATTTTCGGTAACTCCTCCACATTCTTCTCAAATTCCTCTTCTTCTGATAAGTTAGACC
                      ____________________________________________________________
consensus             CCATTTTCGGTAACTCCTCCACATTCTTCTCAAATTCCTCTTCTTCTGATAAGTTAGACC
 
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JMFS145B03+           TGAAAATCTGTTCTGGAACGTACAACTTCCCCTTATGCTCCCTCAAAATTTCCTTCAAAT
JMSF026G07+           TGAAAATCTGTTCTGGAACGTACAACTTCCCCTTATGCTCCCTCAAAATTTCCTTCAAAT
JMSF041D19+           TGAAAATCTGTTCTGGAACGTACAACTTCCCCTTATGCTCCCTCAAAATTTCCTTCAAAT
                      ____________________________________________________________
consensus             TGAAAATCTGTTCTGGAACGTACAACTTCCCCTTATGCTCCCTCAAAATTTCCTTCAAAT
 
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JMFS145B03+           ACACCTCCTCAGGCTTCCCCTGATCACCGTCTTCCTGACTTTTCCTCGAAAACGCCTTCA
JMSF026G07+           ACACCTCCTCAGGCTTCCCCTGATCACCGTCTTCCTGACTTTTCCTCGAAAACGCCTTCA
JMSF041D19+           ACACCTCCTCAGGCTTCCCCTGATCACCGTCTTCCTGACTTTTCCTCGAAAACGCCTTCA
                      ____________________________________________________________
consensus             ACACCTCCTCAGGCTTCCCCTGATCACCGTCTTCCTGACTTTTCCTCGAAAACGCCTTCA
 
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JMFS145B03+           AA                                                          
JMSF026G07+           AATTTAACCTCCTTAGAATCTCAAGGGCACCAGTATCAAAAC-TTTTTTCTGCAAGTCCT
JMSF041D19+           AATTTAACCTCCTTAGAATCTCAAGGGCACCAGTATCAAAACTTTTTTTCTGCAAGTCCT
                      ____________________________________________________________
consensus             AATTTAACCTCCTTAGAATCTCAAGGGCACCAGTATCAAAACTTTTTTTCTGCAAGTCCT
 
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JMSF026G07+           CTTTTTCCTTCAGAGTAAGTAATTTATCCCCAACTTTATATCTGGTTTCTACTTGGGAGG
JMSF041D19+           CTTTTTCCTTCAGAGTAAGTAATTTATCCCCAACTTTATATCTGGTTTCTACTTGGGAGG
                      ____________________________________________________________
consensus             CTTTTTCCTTCAGAGTAAGTAATTTATCCCCAACTTTATATCTGGTTTCTACTTGGGAGG
 
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JMSF026G07+           GGTTTTCCTCCAAAACCCTTGTCACAAAGTCATCGTCGTTGCCCCCACTACTATTGGACT
JMSF041D19+           GGTTTTCCTTCAAAACCCTTGTCACAAAGTCATCGTCGTTGCCCCCACTACTATTGGACT
                      ____________________________________________________________
consensus             GGTTTTCCTTCAAAACCCTTGTCACAAAGTCATCGTCGTTGCCCCCACTACTATTGGACT
 
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JMSF026G07+           GTTCAGAATACTTCGCCTGGCCGAAAATTGTGCGTGGGCAGTAACACGGCGGCGATCTTC
JMSF041D19+           GTTCAGAATACTTCGCCTGGCCGAAAATTGTGCGTGGGCAGTAACACGGCGGCGATCTTC
                      ____________________________________________________________
consensus             GTTCAGAATACTTCGCCTGGCCGAAAATTGTGCGTGGGCAGTAACACGGCGGCGATCTTC
 
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JMSF026G07+           TCGCGATATTTCGCGGAAATTTGAGATTTTGGTGCCGCTTCTGAAGTGAAAACCTGAGTA
JMSF041D19+           TCGCGATATTTCGCGGAAATTTGAGATTTTGGTGCCGCTTCTGAAGTGAAAACCTGAGTA
                      ____________________________________________________________
consensus             TCGCGATATTTCGCGGAAATTTGAGATTTTGGTGCCGCTTCTGAAGTGAAAACCTGAGTA
 
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JMSF026G07+           TGAATGAGCTGCGGAGGAGAATATTCGGGCGGCGTTGAATGAAGATAGGTGATGAATTGC
JMSF041D19+           TGAATGAGCTGCGGAGGAGAATATTCGGGCGGCGTTGAATGAAGATAGGTGATGAATTGC
                      ____________________________________________________________
consensus             TGAATGAGCTGCGGAGGAGAATATTCGGGCGGCGTTGAATGAAGATAGGTGATGAATTGC
 
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JMSF026G07+           AGGTGTTTGGGGAGCCAGCTGAGGAGCAAAACATGGCTGCTTATCCGAGCTGTATCAAAG
JMSF041D19+           AGGTGTTTGGGGAGCCAGCTGAGGAGCAAAACATGGCTGCTTATCCGAGCTGTATCAAAG
                      ____________________________________________________________
consensus             AGGTGTTTGGGGAGCCAGCTGAGGAGCAAAACATGGCTGCTTATCCGAGCTGTATCAAAG
 
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JMSF026G07+           TGAAAAGTGATACAGGTTCCGCAGAAGTTTTGACATTTATTCGGAGTGTAATGCAAACAT
JMSF041D19+           TGAAAAGTGATACAGGTTCCGCAGAAGTTTTGACATTTATTCGGAGTGTAATGCAAACAT
                      ____________________________________________________________
consensus             TGAAAAGTGATACAGGTTCCGCAGAAGTTTTGACATTTATTCGGAGTGTAATGCAAACAT
 
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JMSF026G07+           GAAGCGGAGTTTTCTGAGTCTGCAACTGCAAT                            
JMSF041D19+           GAAGCGGAGTTTTCTGAGTCTGCAACTGCAATGGAAGTGAAGAGAATCTAGAGTGTCCAC
                      ____________________________________________________________
consensus             GAAGCGGAGTTTTCTGAGTCTGCAACTGCAATGGAAGTGAAGAGAATCTAGAGTGTCCAC