Contig 012119:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046G06+                                                            GGAAGTCCATA
                      ____________________________________________________________
consensus                                                              GGAAGTCCATA
 
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JMSF046G06+           CCTTATCAAAAACCACTCCCACGAAGAAAAAGAACGCAAAAAGCCCCAAAATACTGCGAT
                      ____________________________________________________________
consensus             CCTTATCAAAAACCACTCCCACGAAGAAAAAGAACGCAAAAAGCCCCAAAATACTGCGAT
 
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JMSF046G06+           TNATAGGAGGAGAAGGCATTGGATGTATAACCCCCAATTGGGTCCTCAACTTATCTACAA
                      ____________________________________________________________
consensus             TNATAGGAGGAGAAGGCATTGGATGTATAACCCCCAATTGGGTCCTCAACTTATCTACAA
 
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JMSF046G06+           TTGGGTCCTCTTGAAAGCTAGCAAAATTAGTGCTTCCCCCACTAGCAGTAACACTAGAAG
                      ____________________________________________________________
consensus             TTGGGTCCTCTTGAAAGCTAGCAAAATTAGTGCTTCCCCCACTAGCAGTAACACTAGAAG
 
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JMSF046G06+           CATCGAATTCATCGGCAAACCTCTTAATCACAATGTTCCTGGCACCATCGCGAGCCGAAC
JMSF040J20+                                TCTTAATCACAATGTTCCTGGCACCATCGCGAGCCGAAC
                      ____________________________________________________________
consensus             CATCGAATTCATCGGCAAACCTCTTAATCACAATGTTCCTGGCACCATCGCGAGCCGAAC
 
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JMSF046G06+           CCGAAAGCTCCAAGCTGAAACTGTGGTGGTCGCCGCCGCTATTAACGCAAGCCCGAAGAA
JMSF040J20+           CCGAAAGCTCCAAGCTGAAACTGTGGTGGTCGCCGCCGCTATTAACGCAAGCCCGAAGAA
                      ____________________________________________________________
consensus             CCGAAAGCTCCAAGCTGAAACTGTGGTGGTCGCCGCCGCTATTAACGCAAGCCCGAAGAA
 
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JMSF046G06+           ACACCCATTTCTTCCCCCGATTCGGATTCCATCTCCGCCCCGGAACCAGCGCCACTTTCC
JMSF040J20+           ACACCCATTTCTTCCCCCGATTCGGATTCCATCTCCGCCCCGGAACCAGCGCCACTTTCC
                      ____________________________________________________________
consensus             ACACCCATTTCTTCCCCCGATTCGGATTCCATCTCCGCCCCGGAACCAGCGCCACTTTCC
 
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JMSF046G06+           CCCTACATGGGCAAAGAGGCGAAAAAACCAAGAAATTCCTCGAAAAATCGCAGCCGCCTT
JMSF040J20+           CCCTACATGGGCAAAGAGGCGAAAAAACCAAGAAATTCCTCGAAAAATCGCAGCCGCCTT
                      ____________________________________________________________
consensus             CCCTACATGGGCAAAGAGGCGAAAAAACCAAGAAATTCCTCGAAAAATCGCAGCCGCCTT
 
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JMSF046G06+           TCGACGAACACCCCGACTGCAAAATCATTTACCTATGCGCAACTCAACAAAACAACAAGG
JMSF040J20+           TCGACGAACACCCCGACTGCAAAATCATTTACCTATGCGCAACTCAACAAAACAACAAGG
                      ____________________________________________________________
consensus             TCGACGAACACCCCGACTGCAAAATCATTTACCTATGCGCAACTCAACAAAACAACAAGG
 
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JMSF046G06+           AAAAAGAGAAGCAACCCAGTAACCAGGTGACGAACAAGTTGCAGTAAACATGAATCCAGA
JMSF040J20+           AAAAAGAGAAGCAACCCAGTAACCAGGTGACGAACAAGTTGCAGTAAACATGAATCCAGA
                      ____________________________________________________________
consensus             AAAAAGAGAAGCAACCCAGTAACCAGGTGACGAACAAGTTGCAGTAAACATGAATCCAGA
 
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JMSF046G06+           GCTATAGTATAAAGACAACACCATTAATACAGAGTCCAGAAACCTCGGGACACATTAAAA
JMSF040J20+           GCTATAGTATAAAGACAACACCATTAATACAGAGTCCAGAAACCTCGGGACACATTAAAA
                      ____________________________________________________________
consensus             GCTATAGTATAAAGACAACACCATTAATACAGAGTCCAGAAACCTCGGGACACATTAAAA
 
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JMSF046G06+           CGC-AAAAAAATCTAGTACCCACTACACTAGTATATGAATGCAGCCAGCACCAATCACCA
JMSF040J20+           CGCAAAAAAAATCTAGTACCCACTACACTAGTATATGAATGCAGCCAGCACCAATCACCA
                      ____________________________________________________________
consensus             CGCAAAAAAAATCTAGTACCCACTACACTAGTATATGAATGCAGCCAGCACCAATCACCA
 
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JMSF046G06+           ATCACCAATCACCAAACTACTTATAGAGAGAGAAGTTAGGCGAGCAGATAGAGATATATA
JMSF040J20+           ATCACCAATCACCAAACTACTTATAGAGAGAGAAGTTAGGCGAGCAGATAGAGATATATA
                      ____________________________________________________________
consensus             ATCACCAATCACCAAACTACTTATAGAGAGAGAAGTTAGGCGAGCAGATAGAGATATATA
 
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JMSF046G06+           GAGAGAGAAAAGGCGGTGGACGGAGAAGAGAAAATGATGAAGAGGTCAGAATTGGAAT  
JMSF040J20+           GAGAGAGAAAAGGCGGTGGACGGAGAAGAGAAAATGATGAAGAGGTCAGAATTGGAATCC
                      ____________________________________________________________
consensus             GAGAGAGAAAAGGCGGTGGACGGAGAAGAGAAAATGATGAAGAGGTCAGAATTGGAATCC
 
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JMSF040J20+           AAAGAATGAGGAAATTGGATTGTGGTTTTGTGGGAATAGAAAGAGAAAGGATCCAATTGC
                      ____________________________________________________________
consensus             AAAGAATGAGGAAATTGGATTGTGGTTTTGTGGGAATAGAAAGAGAAAGGATCCAATTGC