Contig 012114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019I19Sequence459012114 (3)ref|XP_006360511.1|5e-54PREDICTED: uncharacterized protein LOC102588960 isoform X1 [Solanum tuberosum] 733007192 (2)ref|XP_004250019.1|69.3PREDICTED: uncharacterized protein LOC101259105 [Solanum lycopersicum]
JMSF016D19Sequence490012114 (3)ref|XP_004250019.1|196PREDICTED: uncharacterized protein LOC101259105 [Solanum lycopersicum]
JMSF039M02Sequence610012114 (3)ref|XP_004250019.1|197PREDICTED: uncharacterized protein LOC101259105 [Solanum lycopersicum]865007192 (2)ref|XP_006360511.1|1e-09PREDICTED: uncharacterized protein LOC102588960 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF039M02+                                                             TTCGTTCCCT
                      ____________________________________________________________
consensus                                                               TTCGTTCCCT
 
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JMSF016D19+                                                                 GCTCCA
JMSF039M02+           TTGCTTCTTCCACTTCTAGCACTGACAGTTTTCCCATTATCTAAACTGTTATCCGCTCCA
                      ____________________________________________________________
consensus             TTGCTTCTTCCACTTCTAGCACTGACAGTTTTCCCATTATCTAAACTGTTATCCGCTCCA
 
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JMSF016D19+           TGAAAATGACTGCTGGAATCTAAAACATCGTTTCCAATTGTGCCCGTTATAACATGAATC
JMSF039M02+           TGAAAATGACTGCTGGAATCTAAAACATCGTTTCCAATTGTGCCCGTTATAACATGAATC
                      ____________________________________________________________
consensus             TGAAAATGACTGCTGGAATCTAAAACATCGTTTCCAATTGTGCCCGTTATAACATGAATC
 
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JMSF016D19+           TCACCTGTTGATGACAAAGAAGGATGAGATTCAGTACAGAGGGATCCTAATGGATGTTGT
JMFF019I19+                TGTTGATGACAAAGAAGGATGAGATTCAGTACAGAGGGATCCTAATGGATGTTGT
JMSF039M02+           TCACCTGTTGATGACAAAGAAGGATGAGATTCAGTACAGAGGGATCCTAATGGATGTTGT
                      ____________________________________________________________
consensus             TCACCTGTTGATGACAAAGAAGGATGAGATTCAGTACAGAGGGATCCTAATGGATGTTGT
 
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JMSF016D19+           TCCAGAAAGATTTGGTCAGTCTGCTCTTCCGAATTTAACTTAGAGGGGCCCAAAACTCTG
JMFF019I19+           TCCAGAAAGATTTGGTCAGTCTGCTCTTCCGAATTTAACTTAGAGGGGCCCAAAACTCTG
JMSF039M02+           TCCAGAAAGATTTGGTCAGTCTGCTCTTCCGAATTTAACTTAGAGGGGCCCAAAACTCTG
                      ____________________________________________________________
consensus             TCCAGAAAGATTTGGTCAGTCTGCTCTTCCGAATTTAACTTAGAGGGGCCCAAAACTCTG
 
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JMSF016D19+           TTTTCTTGAATTATTTCTCGAACAATTTCTCGTACTGTGTAGAATGAGCCACCGACTTCC
JMFF019I19+           TTTTCTTGAATTATTTCTCGAACAATTTCTCGTACTGTGTAGAATGAGCCACCGACTTCC
JMSF039M02+           TTTTCTTGAATTATTTCTCGAACAATTTCTCGTACTGTGTAGAATGAGCCACCGACTTCC
                      ____________________________________________________________
consensus             TTTTCTTGAATTATTTCTCGAACAATTTCTCGTACTGTGTAGAATGAGCCACCGACTTCC
 
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JMSF016D19+           TTGTGTGTAAGACGAAGTGAAGGAAAATTCCCATCATTCGACTTCTGATATGTCTTTATA
JMFF019I19+           TTGTGTGTAAGACGAAGTGAAGGAAAATTCCCATCATTCGACTTCTGATATGTCTTTATA
JMSF039M02+           TTGTGTGTAAGACGAAGTGAAGGAAAATTCCCATCATTCGACTTCTGATATGTCTTTATA
                      ____________________________________________________________
consensus             TTGTGTGTAAGACGAAGTGAAGGAAAATTCCCATCATTCGACTTCTGATATGTCTTTATA
 
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JMSF016D19+           AAAGTCTCAACCATAGATTTTCTCTCCTCCTTTGAGCGCCTAATCCTCGTCTTCTTTCCC
JMFF019I19+           AAAGTCTCAACCATAGATTTTCTCTCCTCCTTTGAGCGCCTAATCCTCGTCTTCTTTCCC
JMSF039M02+           AAAGTCTCAACCATAGATTTTCTCTCCTCCTTTGAGCGCCTAATCCTCGTCTTCTTTCCC
                      ____________________________________________________________
consensus             AAAGTCTCAACCATAGATTTTCTCTCCTCCTTTGAGCGCCTAATCCTCGTCTTCTTTCCC
 
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JMSF016D19+           CTAGAGTCCTTGCAAGTAGCAAGTGCGATTGTTGGCATAGACCATGCACCCTTAATTATG
JMFF019I19+           CTAGAGTCCTTGCAAGTAGCAAGTGCGATTGTTGGCATAGACCATGCACCCTTAATTATG
JMSF039M02+           CTAGAGTCCTTGCAAGTAGCAAGTGCGATTGTTGGCATAGACCATGCACCCTTAATTATG
                      ____________________________________________________________
consensus             CTAGAGTCCTTGCAAGTAGCAAGTGCGATTGTTGGCATAGACCATGCACCCTTAATTATG
 
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JMSF016D19+           TGCATTTTGTGCTAAATGTTTACGACGAAGGATGAATCCTGGGTTGATAGTGCTAAAAAC
JMFF019I19+           TGCATTTTGTGCTAAATGTTTACGACGAAGGATGAATCCTGGGTTGATAGTGCTAAAAAC
JMSF039M02+           TGCATTTTGTGCTAAATGTTTACGACGAAGGATGAATCCTGGGTTGATAGTGCTAAAAAC
                      ____________________________________________________________
consensus             TGCATTTTGTGCTAAATGTTTACGACGAAGGATGAATCCTGGGTTGATAGTGCTAAAAAC
 
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JMSF016D19+           CCT                                                         
JMFF019I19+           CCTACTTCAGGAATTCAGGTAAGCGTCCAAAAATTCTCATTACC                
JMSF039M02+           CCTACTTCAGGAATTCAGGTAAGCGTCCAAAAATTCTCATTACCAGGGAGGGACCAAGCC
                      ____________________________________________________________
consensus             CCTACTTCAGGAATTCAGGTAAGCGTCCAAAAATTCTCATTACCAGGGAGGGACCAAGCC