Contig 012109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004H14Sequence426012109 (4)ref|XP_006342209.1|6e-05PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl
JMSF032K23Sequence725012109 (4)ref|XP_006342209.1|3e-70PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl683005856 (3)gb|AIU50327.1|4e-101ABC1-like kinase, partial [Solanum lycopersicum]
JMSF038G11Sequence655012109 (4)ref|XP_006342209.1|1e-48PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl862005856 (3)gb|AIU50327.1|1e-98ABC1-like kinase, partial [Solanum lycopersicum]
JMSF052N09Sequence723012109 (4)ref|XP_006342209.1|4e-70PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chl915005856 (3)gb|AIU50327.1|2e-119ABC1-like kinase, partial [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+                                                      TGGCTGCAGCAATNGGA
JMSF032K23+                                                             AGCAATGGGA
                      ____________________________________________________________
consensus                                                        TGGCTGCAGCAATGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           TATGCAGATATAGAGGAGTAGATAGAATCGAGTGGACGTCCCAACTCCCTCTCAATACAG
JMSF032K23+           TATGCAGATATAGAGGAGTAGATAGAATCGAGTGGACGTCCCAACTCCCTCTCAATACAG
                      ____________________________________________________________
consensus             TATGCAGATATAGAGGAGTAGATAGAATCGAGTGGACGTCCCAACTCCCTCTCAATACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           GAAAATGCTTCCACATCAGGAAAAGTTGGCAAAGCATCCTGCAACTTAGAAAGCTCCTCA
JMSF032K23+           GAAAATGCTTCCACATCAGGAAAAGTTGGCAAAGCATCCTGCAACTTAGAAAGCTCCTCA
                      ____________________________________________________________
consensus             GAAAATGCTTCCACATCAGGAAAAGTTGGCAAAGCATCCTGCAACTTAGAAAGCTCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           AGAAATTCCGGCGGACATAAATCAGGTCGGGTGGATAATCCTTGGCCAAGTTTAACAAAA
JMSF032K23+           AGAAATTCCGGCGGACATAAATCAGGTCGGGTGGATAATCCTTGGCCAAGTTTAACAAAA
JMSF038G11+                TTCCGGCGGACATAAATCAGGTCGGGTGGATAATCCTTGGCCAAGTTTAACAAAA
                      ____________________________________________________________
consensus             AGAAATTCCGGCGGACATAAATCAGGTCGGGTGGATAATCCTTGGCCAAGTTTAACAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           GTAGGACCTAAATTGGTGAAAATCTCCCTTAGCTCAACGGCGCGTAATCTTCTATTCTGG
JMSF032K23+           GTAGGACCTAAATTGGTGAAAATCTCCCTTAGCTCAACGGCGCGTAATCTTCTATTCTGG
JMSF038G11+           GTAGGACCTAAATTGGTGAAAATCTCCCTTAGCTCAACGGCGCGTAATCTTCTATTCTGG
                      ____________________________________________________________
consensus             GTAGGACCTAAATTGGTGAAAATCTCCCTTAGCTCAACGGCGCGTAATCTTCTATTCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           TCCAGCTGGCCGTTCAATTGGTCGAGCCACAGGCTAAGGCCGAAAGAACCAAGCCCAGTG
JMSF032K23+           TCCAGCTGGCCGTTCAATTGGTCGAGCCACAGGCTAAGGCCGAAAGAACCAAGCCCAGTG
JMSF038G11+           TCCAGCTGGCCGTTCAATTGGTCGAGCCACAGGCTAAGGCCGAAAGAACCAAGCCCAGTG
                      ____________________________________________________________
consensus             TCCAGCTGGCCGTTCAATTGGTCGAGCCACAGGCTAAGGCCGAAAGAACCAAGCCCAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           AATATCTCGAGAGCTCTGCTCAACACCTTGATGGGTCGAGGGCCATACTTAGCGGACAAG
JMSF032K23+           AATATCTCGAGAGCTCTGCTCAACACCTTGATGGGTCGAGGGCCATACTTAGCGGACAAG
JMSF004H14+                                                         ACTTAGCGGACAAG
JMSF038G11+           AATATCTCGAGAGCTCTGCTCAACACCTTGATGGGTCGAGGGCCATACTTAGCGGACAAG
                      ____________________________________________________________
consensus             AATATCTCGAGAGCTCTGCTCAACACCTTGATGGGTCGAGGGCCATACTTAGCGGACAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           AGTTGTGGGCTATAAACTGAAGCGTTTGCTGCACGCGCCATTGCCCTAGCTTCAGCTTGC
JMSF032K23+           AGTTGTGGGCTATAAACTGAAGCGTTTGCTGCACGCGCCATTGCCCTAGCTTCAGCTTGC
JMSF004H14+           AGTTGTGGGCTATAAACTGAAGCGTTTGCTGCACGCGCCATTGCCCTAGCTTCAGCTTGC
JMSF038G11+           AGTTGTGGGCTATAAACTGAAGCGTTTGCTGCACGCGCCATTGCCCTAGCTTCAGCTTGC
                      ____________________________________________________________
consensus             AGTTGTGGGCTATAAACTGAAGCGTTTGCTGCACGCGCCATTGCCCTAGCTTCAGCTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           ATATCGTCTGCTCGATCTCTACTGGATGGAATGGAGGAAGTGACTTCGCCTCGTTGCAGA
JMSF032K23+           ATATCGTCTGCTCGATCTCTACTGGATGGAATGGAGGAAGTGACTTCGCCTCGTTGCAGA
JMSF004H14+           ATATCGTCTGCTCGATCTCTACTGGATGGAATGGAGGAAGTGACTTCGCCTCGTTGCAGA
JMSF038G11+           ATATCGTCTGCTCGATCTCTACTGGATGGAATGGAGGAAGTGACTTCGCCTCGTTGCAGA
                      ____________________________________________________________
consensus             ATATCGTCTGCTCGATCTCTACTGGATGGAATGGAGGAAGTGACTTCGCCTCGTTGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           GATTGCAAAGAACCATTACTGTTGTCAGACGACCGGTCTCTGATGGCTGGCACCTGTCTG
JMSF032K23+           GATTGCAAAGAACCATTACTGTTGTCAGACGACCGGTCTCTGATGGCTGGCACCTGTCTG
JMSF004H14+           GATTGCAAAGAACCATTACTGTTGTCAGACGACCGGTCTCTGATGGCTGGCACCTGTCTG
JMSF038G11+           GATTGCAAAGAACCATTACTGTTGTCAGACGACCGGTCTCTGATGGCTGGCACCTGTCTG
                      ____________________________________________________________
consensus             GATTGCAAAGAACCATTACTGTTGTCAGACGACCGGTCTCTGATGGCTGGCACCTGTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           GGTCCAGCCTCCACCAGGGCCGCTCGTACAAGATGTGTTTTCTTCTGTCTCCCCCTCTTC
JMSF032K23+           GGTCCAGCCTCCACCAGGGCCGCTCGTACAAGATGTGTTTTCTTCTGTCTCCCCCTCTTC
JMSF004H14+           GGTCCAGCCTCCACCAGGGCCGCTCGTACAAGATGTGTTTTCTTCTGTCTCCCCCTCTTC
JMSF038G11+           GGTCCAGCCTCCACCAGGGCCGCTCGTACAAGATGTGTTTTCTTCTGTCTCCCCCTCTTC
                      ____________________________________________________________
consensus             GGTCCAGCCTCCACCAGGGCCGCTCGTACAAGATGTGTTTTCTTCTGTCTCCCCCTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           TTCTCCCATGAAAGAGTTGGGGAGCCAGAAACCCTAGCAACGCCAGGCGATGTCGGTAGA
JMSF032K23+           TTCTCCCATGAAAGAGTTGGGGAGCCAGAAACCCTAGCAACGCCAGGCGATGTCGGTAGA
JMSF004H14+           TTCTCCCATGAAAGAGTTGGGGAGCCAGAAACCCTAGCAACGCCAGGCGATGTCGGTAGA
JMSF038G11+           TTCTCCCATGAAAGAGTTGGGGAGCCAGAAACCCTAGCAACGCCAGGCGATGTCGGTAGA
                      ____________________________________________________________
consensus             TTCTCCCATGAAAGAGTTGGGGAGCCAGAAACCCTAGCAACGCCAGGCGATGTCGGTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF052N09+           GCAAATGAAGGAGCGGCCTTCAAAGATACTGCGAAGGAACTCATC               
JMSF032K23+           GCAAATGAAGGAGCGGCCTTCAAAGATACTGCGAAGGAACTCATCGCTTCGCCT      
JMSF004H14+           GCAAATGAAGGAGCGGCCTTCAAAGATACTGCGAAGGAACTCATCGCTTCGCCTGCCGAT
JMSF038G11+           GCAAATGAAGGAGCGGCCTTCAAAGATACTGCGAAGGAACTCATCGCTTCGCCTGCCGAT
                      ____________________________________________________________
consensus             GCAAATGAAGGAGCGGCCTTCAAAGATACTGCGAAGGAACTCATCGCTTCGCCTGCCGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF004H14+           ATGATTTCAGGATCTTCTAATTGACGGGCAGGGAGAACGCAGGAATGAGCT         
JMSF038G11+           ATGATTTCAGGATCTTCTAATTGACGGGCAGGGAGAACGCAGGAATGAGCTAGGACGAAC
                      ____________________________________________________________
consensus             ATGATTTCAGGATCTTCTAATTGACGGGCAGGGAGAACGCAGGAATGAGCTAGGACGAAC