Contig 012108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C18Sequence491012108 (4)ref|XP_009615358.1|2e-09PREDICTED: nephrocystin-3 [Nicotiana tomentosiformis]779002514 (4)ref|XP_011070356.1|5e-94PREDICTED: nephrocystin-3 [Sesamum indicum]
JMFF029K18Sequence247012108 (4)743002514 (4)ref|XP_011070356.1|1e-112PREDICTED: nephrocystin-3 [Sesamum indicum]
JMSF013M23Sequence254012108 (4)752002514 (4)ref|XP_011070356.1|2e-122PREDICTED: nephrocystin-3 [Sesamum indicum]
JMSF038G01Sequence611012108 (4)ref|XP_009615358.1|4e-33PREDICTED: nephrocystin-3 [Nicotiana tomentosiformis]874002514 (4)ref|XP_011070356.1|7e-138PREDICTED: nephrocystin-3 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038G01+ ACCCTCACCGG
                      ____________________________________________________________
consensus ACCCTCACCGG
 
. : . : . : . : . : . :
JMSF038G01+ ACGCAATCGTGTCCCGAGCGAGCTTCAACAGGAATGGCCCGAGATCCGGGTTGTCAAGCG
                      ____________________________________________________________
consensus ACGCAATCGTGTCCCGAGCGAGCTTCAACAGGAATGGCCCGAGATCCGGGTTGTCAAGCG
 
. : . : . : . : . : . :
JMFF006C18+ TTTCCGGAGCCCCGATCCG
JMSF038G01+ ACGATTCGTCGATAACAGCCTTCTCCGGCGGCGATTTCTTCTTTCCGGAGCCCCGATCCG
                      ____________________________________________________________
consensus ACGATTCGTCGATAACAGCCTTCTCCGGCGGCGATTTCTTCTTTCCGGAGCCCCGATCCG
 
. : . : . : . : . : . :
JMFF006C18+ GCGACGGCTTGGCTCGTGAGGTGGACGGGGAAGGAGAGGGAGGACGCCGTGGAGCTGGCG
JMSF038G01+ GCGACGGCTTGGCTCGTGAGGTGGACGGGGAAGGAGAGGGAGGACGCCGTGGAGCTGGCG
                      ____________________________________________________________
consensus GCGACGGCTTGGCTCGTGAGGTGGACGGGGAAGGAGAGGGAGGACGCCGTGGAGCTGGCG
 
. : . : . : . : . : . :
JMFF006C18+ AGCTGGGCTTCGTGTTAACATTCTCGGATCTACTCGAATTAGCTCCGATCTGGCCNTGAC
JMSF038G01+ AGCTGGGCTTCGTGTTAACATTCTCGGATCTACTCGAATTAGCTCCGATCTGGCCTTGAC
                      ____________________________________________________________
consensus AGCTGGGCTTCGTGTTAACATTCTCGGATCTACTCGAATTAGCTCCGATCTGGCCTTGAC
 
. : . : . : . : . : . :
JMFF006C18+ TCTCGTCTGGAACTGTGATTCTCAATGGCGTAGCTTCCGGCGGCGTTTTAACTGAAACTA
JMSF038G01+ TCTCGTCTGGAACTGTGATTCTCAATGGCGTAGCTTCCGGCGGCGTTTTAACTGAAACTA
                      ____________________________________________________________
consensus TCTCGTCTGGAACTGTGATTCTCAATGGCGTAGCTTCCGGCGGCGTTTTAACTGAAACTA
 
. : . : . : . : . : . :
JMSF013M23+ CAAANCAAAAAAATCC
JMFF029K18+ CAAAACAAAAAAATCC
JMFF006C18+ TTCCCGGCATTTCCTCAATTCACAACAGAAAAACAAAAACAAAACAAAACAAAAAAATCC
JMSF038G01+ TTCCCGGCATTTCCTCAATTCACAACAGAAAAACAAAAACAAAACAAAACAAAAAAATCC
                      ____________________________________________________________
consensus TTCCCGGCATTTCCTCAATTCACAACAGAAAAACAAAAACAAAACAAAACAAAAAAATCC
 
. : . : . : . : . : . :
JMSF013M23+ CTCTTTCCCCTAAGAAAACCGATCGAATTTATCAAACCGATATCCTGTATTATACAATCG
JMFF029K18+ CTCTTTCCCCTAAGAAAACCGATCGAATTTATCAAACCGATATCCTGTATTATACAATCG
JMFF006C18+ CTCTTTCCCCTAAGAAAACCGATCGAATTTATCAAACCGATATCCTGTATTATACAATCG
JMSF038G01+ CTCTTTCCCCTAAGAAAACCGATCGAATTTATCAAACCGATATCCTGTATTATACAATCG
                      ____________________________________________________________
consensus CTCTTTCCCCTAAGAAAACCGATCGAATTTATCAAACCGATATCCTGTATTATACAATCG
 
. : . : . : . : . : . :
JMSF013M23+ CCAAAAAGCGTTACCAATAAGTAATTAATGAGAGATTAAGAGACTGAATTATAGACTACA
JMFF029K18+ CCAAAAAGCGTTACCAATAAGTAATTAATGAGAGATTAAGAGANTGAATTATAGACTACA
JMFF006C18+ CCAAAAAGCGTTACCAATAAGTAATTAATGAGAGATTAAGAGACTGAATTATAGACTACA
JMSF038G01+ CCAAAAAGCGTTACCAATAAGTAATTAATGAGAGATTAAGAGACTGAATTATAGACTACA
                      ____________________________________________________________
consensus CCAAAAAGCGTTACCAATAAGTAATTAATGAGAGATTAAGAGACTGAATTATAGACTACA
 
. : . : . : . : . : . :
JMSF013M23+ ACAGGCCACCATTCTCTACTGTTGAAGAACAGTTTAGAGCTTAGGAGATAGAGAGAGAGA
JMFF029K18+ ACAGGCCACCATTCTCTACTGNTGAAGAACAGTTTAGAGCTTAGGAGATAGAGAGAGAGA
JMFF006C18+ ACAGGCCACCATTCTCTACTGTTGAAGAACAGTTTAGAGCTTAGGAGATAGAGAGAGAGA
JMSF038G01+ ACAGGCCACCATTCTCTACTGTTGAAGAACAGTTTAGAGCTTAGGAGATAGAGAGAGAGA
                      ____________________________________________________________
consensus ACAGGCCACCATTCTCTACTGTTGAAGAACAGTTTAGAGCTTAGGAGATAGAGAGAGAGA
 
. : . : . : . : . : . :
JMSF013M23+ GAGAGAGAGGGAGGAAGATGAAGTTCAGCTGAAGACGAGACTGGGGACC
JMFF029K18+ GAGAGAGAGGGAGGAAGATGAAGTTCAGCTGAAGACGAGACTGGGGACC
JMFF006C18+ GAGAGAGAGGGAGGAAGATGAAGTTCAGCTGAAGACGAGACTGGGGACC
JMSF038G01+ GAGAGAGAGGGAGGAAGATGAAGTTCAGCTGAAGACGAGACTGGGGACCAGCGGTCAGTC
                      ____________________________________________________________
consensus GAGAGAGAGGGAGGAAGATGAAGTTCAGCTGAAGACGAGACTGGGGACCAGCGGTCAGTC