Contig 012104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037K16Sequence693012104 (2)ref|XP_006383097.1|3e-93hypothetical protein POPTR_0005s11510g [Populus trichocarpa] gb|ERP60894.1| hypo708005763 (2)gb|KJB43318.1|2e-64hypothetical protein B456_007G193900 [Gossypium raimondii]
JMSF046H07Sequence777012104 (2)ref|XP_010271558.1|340PREDICTED: uncharacterized protein LOC104607588 [Nelumbo nucifera]769005763 (2)gb|KJB43318.1|5e-66hypothetical protein B456_007G193900 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046H07+ ACTTGGCAGACGCCGGCGTGGAGCATTTGTTCGACGGTTTCGGGGTCGCGG
                      ____________________________________________________________
consensus ACTTGGCAGACGCCGGCGTGGAGCATTTGTTCGACGGTTTCGGGGTCGCGG
 
. : . : . : . : . : . :
JMSF046H07+ CCGAGCAATCCGATTGCTCTGGCGGCGTTTTCCTGGCCTTCTGGTTTGCCGTCCTTGAGG
                      ____________________________________________________________
consensus CCGAGCAATCCGATTGCTCTGGCGGCGTTTTCCTGGCCTTCTGGTTTGCCGTCCTTGAGG
 
. : . : . : . : . : . :
JMSF046H07+ AGTTTGAGCAATGGCGGGACTCCGCCTTCCTCGATGATTAGCTTCCCGTAGCGATCATTG
JMSF037K16+ TCCTCGATGATTAGCTTCCCGTAGCGATCATTG
                      ____________________________________________________________
consensus AGTTTGAGCAATGGCGGGACTCCGCCTTCCTCGATGATTAGCTTCCCGTAGCGATCATTG
 
. : . : . : . : . : . :
JMSF046H07+ TCCCTGGCCAGGGAAACCAGGGAGGCGGCGGCGTCGGAGCGGTCGTCGAGGGATCCGGTG
JMSF037K16+ TCCCTGGCCAGGGAAACCAGGGAGGCGGCGGCGTCGGAGCGGTCGTCGAGGGATCCGGTG
                      ____________________________________________________________
consensus TCCCTGGCCAGGGAAACCAGGGAGGCGGCGGCGTCGGAGCGGTCGTCGAGGGATCCGGTG
 
. : . : . : . : . : . :
JMSF046H07+ TAGAGAATCGCAATCTGTTCCCATATGAGGCAGAGGATGGGCTCGTTGGCGGCGATCGGC
JMSF037K16+ TAGAGAATCGCAATCTGTTCCCATATGAGGCAGAGGATGGGCTCGTTGGCGGCGATCGGC
                      ____________________________________________________________
consensus TAGAGAATCGCAATCTGTTCCCATATGAGGCAGAGGATGGGCTCGTTGGCGGCGATCGGC
 
. : . : . : . : . : . :
JMSF046H07+ GGGAGGCCGAGGTACTCGTCGTCGCGTGCGTCGGCGGAGGCGGAGACGCGGAGGAGCCAC
JMSF037K16+ GGGAGGCCGAGGTACTCGTCGTCACGTGCGTCGGCGGAGGCGGAGACGCGGAGGAGCCAC
                      ____________________________________________________________
consensus GGGAGGCCGAGGTACTCGTCGTCGCGTGCGTCGGCGGAGGCGGAGACGCGGAGGAGCCAC
 
. : . : . : . : . : . :
JMSF046H07+ GACACATCCCCGATCGAGTTATCCAGCTGGGATTGCATCTTCCGGAACGCCGCCGCGGGA
JMSF037K16+ GACACATCCCCGATCGAGTTATCCAGCTGGGATTGCATCTTCCGGAACGCCGCCGCGGGA
                      ____________________________________________________________
consensus GACACATCCCCGATCGAGTTATCCAGCTGGGATTGCATCTTCCGGAACGCCGCCGCGGGA
 
. : . : . : . : . : . :
JMSF046H07+ ACGATGGTGAACACGCGCTTCACCAGCCCGTGCGTGCGGCACTTCACCACCAACACTAAC
JMSF037K16+ ACGATGGTGAACACGCGCTTCACCAGCCCGTGCGTGCGGCACTTCACCACCAACACTAAC
                      ____________________________________________________________
consensus ACGATGGTGAACACGCGCTTCACCAGCCCGTGCGTGCGGCACTTCACCACCAACACTAAC
 
. : . : . : . : . : . :
JMSF046H07+ GCCTTCTCCAGAACCTGCTCCGTGTCCTCCACGATCCGCCGCGTCGGCCGCTCGTACAGG
JMSF037K16+ GCCTTCTCCAGAACCTGCTCCGTGTCCTCCACGATCCGCCGCGTCGGCCGCTCGTACAGG
                      ____________________________________________________________
consensus GCCTTCTCCAGAACCTGCTCCGTGTCCTCCACGATCCGCCGCGTCGGCCGCTCGTACAGG
 
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JMSF046H07+ TCGTTGCTGGCACGCGCCGCCTGCCGCAGCAGCGCCGCCAGCTTCTCCGTCTTCGTCTTC
JMSF037K16+ TCGTTGCTGGCACGCGCCGCCTGCCGCAGCAGCGCCGCCAGCTTCTCCGTCTTCGTCTTC
                      ____________________________________________________________
consensus TCGTTGCTGGCACGCGCCGCCTGCCGCAGCAGCGCCGCCAGCTTCTCCGTCTTCGTCTTC
 
. : . : . : . : . : . :
JMSF046H07+ AACTCCGCGCATTCCTGCTTGAACGAATAGCTAGCCTCGTCCGCCGCCTTAGTCACCTGG
JMSF037K16+ AACTCCGCGCATTCCTGCTTGAACGAATAGCTAGCCTCGTCCGCCGCCTTAGTCACCTGG
                      ____________________________________________________________
consensus AACTCCGCGCATTCCTGCTTGAACGAATAGCTAGCCTCGTCCGCCGCCTTAGTCACCTGG
 
. : . : . : . : . : . :
JMSF046H07+ TCCGCCAATTGAATCGGCTTCGCAAGGATCTGCTTCACTTTATCCGCCATTAAAGCTACG
JMSF037K16+ TCCGCCAATTGAATCGGCTTCGCAAGGATCTGCTTCACTTTATCCGCCATTAAAGCTACG
                      ____________________________________________________________
consensus TCCGCCAATTGAATCGGCTTCGCAAGGATCTGCTTCACTTTATCCGCCATTAAAGCTACG
 
. : . : . : . : . : . :
JMSF046H07+ ATTATCTGTGAAAATTAAAATGCTTGAAGAAAGCAAGGTAGAAAACTGGGAAATGGATCT
JMSF037K16+ ATTATCTGTGAAAATTAAAATGCTTGAAGAAAGCAAGGTAGAAAACTGGGAAATGGATCT
                      ____________________________________________________________
consensus ATTATCTGTGAAAATTAAAATGCTTGAAGAAAGCAAGGTAGAAAACTGGGAAATGGATCT
 
. : . : . : . : . : . :
JMSF046H07+ ACATT
JMSF037K16+ ACATTGATAATAAGCTAAAGGAAGGTCGTCAATGGAGGTCGTCGGGGACAAGGTCAAACC
                      ____________________________________________________________
consensus ACATTGATAATAAGCTAAAGGAAGGTCGTCAATGGAGGTCGTCGGGGACAAGGTCAAACC