Contig 012103:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002N11Sequence259012103 (2)ref|XP_006356425.1|1e-15PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Solanum tu721019214ref|XP_002267500.1|2e-41PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Vitis vinifera]
JMSF037I23Sequence627012103 (2)ref|XP_006356425.1|3e-50PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Solanum tu698022606ref|XP_006356425.1|9e-50PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal-like [Solanum tu

Alignment

This contig is upended


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JMSF037I23+                                            CACTAAAAATAAATAAAAATTTCTTCT
                      ____________________________________________________________
consensus                                              CACTAAAAATAAATAAAAATTTCTTCT
 
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JMSF037I23+           TTAACCCAATTTTCAGCAATCCCAACCTCAGACAGTAGTGTAATCAACACTGTTTCAAAT
                      ____________________________________________________________
consensus             TTAACCCAATTTTCAGCAATCCCAACCTCAGACAGTAGTGTAATCAACACTGTTTCAAAT
 
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JMSF037I23+           AGTTAGATATTGTTGAAAACCTATGAAATTATAGATCATCTTTCTTTTTTCTGTATCAAA
                      ____________________________________________________________
consensus             AGTTAGATATTGTTGAAAACCTATGAAATTATAGATCATCTTTCTTTTTTCTGTATCAAA
 
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JMSF037I23+           TATGAGAAATTAGTAGAATTACAGAGTTACCTTCCCTGTGAGAATGATGACCCCCACAGA
                      ____________________________________________________________
consensus             TATGAGAAATTAGTAGAATTACAGAGTTACCTTCCCTGTGAGAATGATGACCCCCACAGA
 
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JMSF037I23+           ACCATCATCCCTGGCATCATTAAATGCACGAATAAGTTCCTTAACTGTATGAGGCCTGAA
                      ____________________________________________________________
consensus             ACCATCATCCCTGGCATCATTAAATGCACGAATAAGTTCCTTAACTGTATGAGGCCTGAA
 
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JMSF037I23+           AGCATTCCTTCTTTCTGGTCTATTAATGGTTATCTTAGCAATGGCTTCTCCGACGGCTTT
                      ____________________________________________________________
consensus             AGCATTCCTTCTTTCTGGTCTATTAATGGTTATCTTAGCAATGGCTTCTCCGACGGCTTT
 
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JMSF002N11+            TCGTAGATGATATCAGTGAAGTCCTTGCCGGAGTCATCGGAAGGGACCAATCTCCAAGC
JMSF037I23+           CTCGTAGATGATATCAGTGAAGTCCTTGCCGGAGTCATCGGAAGGGACCAATCTCCAAGC
                      ____________________________________________________________
consensus             CTCGTAGATGATATCAGTGAAGTCCTTGCCGGAGTCATCGGAAGGGACCAATCTCCAAGC
 
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JMSF002N11+           GGGCGCGTGAGCGGGGACTTCGCCGTGAACTCTGTGGTAGGTGTCGTTGATGGACGAGCT
JMSF037I23+           GGGCGCGTGAGCGGGGACTTCGCCGTGAACTCTGTGGTAGGTGTCGTTGATGGACGAGCT
                      ____________________________________________________________
consensus             GGGCGCGTGAGCGGGGACTTCGCCGTGAACTCTGTGGTAGGTGTCGTTGATGGACGAGCT
 
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JMSF002N11+           GCAACTCGAGGAGCCAATTGAGGGGAGAGAAGAGCAGGGAGGTGGTTGCGGCGGCAGGAG
JMSF037I23+           GCAACTCGAGGAGCCAATTGAGGGGAGAGAAGAGCAGGGAGGTGGTTGCGGCGGCAGGAG
                      ____________________________________________________________
consensus             GCAACTCGAGGAGCCAATTGAGGGGAGAGAAGAGCAGGGAGGTGGTTGCGGCGGCAGGAG
 
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JMSF002N11+           GTGATTGGCGACGGACGCCACCCTCCTTGTGACGGTGGTGATGAGGGCCTTCTCTGATGC
JMSF037I23+           GTGATTGGCGACGGACGCCACCCTCCTTGTGACGGTGGTGATGAGGGCCTTCTCTGATGC
                      ____________________________________________________________
consensus             GTGATTGGCGACGGACGCCACCCTCCTTGTGACGGTGGTGATGAGGGCCTTCTCTGATGC
 
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JMSF002N11+           TCCCGACATTGCTCGGCGT                                         
JMSF037I23+           TCCCGACATTGCTCGGCGTAGTGAGTGGGTGGTTCCCACGGAATTTGAAGAAGAGCAGCC
                      ____________________________________________________________
consensus             TCCCGACATTGCTCGGCGTAGTGAGTGGGTGGTTCCCACGGAATTTGAAGAAGAGCAGCC