| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031P16 | Sequence | 545 | 012099 (7) | ref|XP_009596503.1| | 5e-83 | PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tomentosifor | 546 | 012099 (7) | gb|EYU20366.1| | 3e-23 | hypothetical protein MIMGU_mgv1a009297mg [Erythranthe guttata] |
| JMFF042J17 | Sequence | 641 | 012099 (7) | ref|XP_009596503.1| | 2e-109 | PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tomentosifor | |||||
| JMSF035P09 | Sequence | 644 | 012099 (7) | ref|XP_009596503.1| | 1e-105 | PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tomentosifor | 557 | 012099 (7) | ref|XP_009596503.1| | 4e-31 | PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tomentosifor |
| JMSF036G01 | Sequence | 683 | 012099 (7) | ref|XP_011081694.1| | 1e-99 | PREDICTED: pollen-specific protein SF21-like [Sesamum indicum] | 741 | 012099 (7) | ref|XP_009596503.1| | 1e-127 | PREDICTED: pollen-specific protein SF21-like isoform X3 [Nicotiana tomentosifor |
This contig is upended
. : . : . : . : . : . :
rJMFF031P16- GGTATTCCTT
____________________________________________________________
consensus GGTATTCCTT
. : . : . : . : . : . :
rJMFF031P16- TCTCATCATCATCAAAACAATAAATTATTCTGGGATGTACAAGATTATGACTAATTATTT
rJMSF035P09- AAGATTATGACTAATTATTT
____________________________________________________________
consensus TCTCATCATCATCAAAACAATAAATTATTCTGGGATGTACAAGATTATGACTAATTATTT
. : . : . : . : . : . :
rJMFF031P16- CGATTACAAACGTTGAAAAAAAAAAAAGNGGGAAAAAAATATATATATTATTCTCTCTAT
rJMSF035P09- CGATTACAAACGTTG-AAAAAAAAAANGGGGGAAAAAAATATATATATTATTCNCNCTAT
____________________________________________________________
consensus CGATTACAAACGTTGAAAAAAAAAAAAGGGGGAAAAAAATATATATATTATTCTCTCTAT
. : . : . : . : . : . :
rJMFF031P16- CATTTCTCTCACCTTCTATTTCTCTTATCTACAATCCACGNGTAANTTTTTTCTACCCTG
rJMSF035P09- CATTTCTCNCACCTTCNATTTCTCTTATCTACAATCCACGNGTAACTTTTTTCTACCCNG
rJMSF036G01- TTTCTCTCACCTTCTATTTCTCTTATCTACAATCCACGTGTAACTTTTTTCTACCCTG
____________________________________________________________
consensus CATTTCTCTCACCTTCTATTTCTCTTATCTACAATCCACGTGTAACTTTTTTCTACCCTG
. : . : . : . : . : . :
rJMFF031P16- ACCTTAAATCTTCAAATCTGGGATTTTGTTACNTATCTTACACAAAATCNCCCNCCCCCC
rJMSF035P09- ACCTTAAATCTTCAAATCGGGGATTTNGTTACATATCTTACACAAAATCACCCACCCCCC
rJMSF036G01- ACCTTAAATCTTCAAATCTGGGATTTTGTTACATATCTTACACAAAATCACCCACCCCCC
____________________________________________________________
consensus ACCTTAAATCTTCAAATCTGGGATTTTGTTACATATCTTACACAAAATCACCCACCCCCC
. : . : . : . : . : . :
rJMFF031P16- TTTACCCTGCTTTCATCTTCTTCTGCTTGTCTCATACCTCTATAAAAATCCTCGTTTTAA
rJMSF035P09- TTTACCCGGCTTTCATCTTCTTCGGCTNGTCTCANACCTCTATAGAAATCCNCGTTTTAA
rJMSF036G01- TTTACCCTGCTTTCATCTTCTTCTGCTTGTCTCATACCTCTATAGAAATCCTCGTTTTAA
____________________________________________________________
consensus TTTACCCTGCTTTCATCTTCTTCTGCTTGTCTCATACCTCTATAGAAATCCTCGTTTTAA
. : . : . : . : . : . :
rJMFF031P16- TCGGTTTCAACTTCAACCCCATGCTCTCCGGNGAAAAAAGCTCGGGGGAAATGCTANTTG
rJMSF035P09- TCGGTTTCAACTTCAACCCCANGCTCTCCGGNGANAAAAGCTCGGGGGAGANGCTAGTTG
rJMSF036G01- TCGGTTTCAACTTCAACCCCATGCTCTCCGGTGAGAAAAGCTCGGGGGAGATGCTAGTTG
____________________________________________________________
consensus TCGGTTTCAACTTCAACCCCATGCTCTCCGGTGAGAAAAGCTCGGGGGAGATGCTAGTTG
. : . : . : . : . : . :
rJMFF031P16- GACTTAACGGACTTCTTGGGNTTACNCTAAACTGCNATGGCCTGNAAAACCCNAACCCCA
rJMSF035P09- GACTTAACGGACTTCTNGGGCTTACGCTAAACNGCGANGGCCNGTAAAACCCGAACCCCA
rJMSF036G01- GACTTAACGGACTTCTTGGGCTTACGCTAAACTGCGATGGCCTGTAAAACCCGAACCCCA
____________________________________________________________
consensus GACTTAACGGACTTCTTGGGCTTACGCTAAACTGCGATGGCCTGTAAAACCCGAACCCCA
. : . : . : . : . : . :
rJMFF031P16- TGAGGAAGTACTCCAACGGNATCAACATTGCATCGGGTTGCTCTTCTGTTACCATTGACC
rJMSF035P09- NGAGGAAGTACTCCAANGGTATCAACATTGCATCGGGTNGCTCTTCNGTTACCATNGACC
rJMSF036G01- TGAGGAAGTACTCCAACGGTATCAACATTGCATCGGGTTGCTCTTCTGTTACCATTGACC
____________________________________________________________
consensus TGAGGAAGTACTCCAACGGTATCAACATTGCATCGGGTTGCTCTTCTGTTACCATTGACC
. : . : . : . : . : . :
rJMFF031P16- CNCACCCTTGAACCTCAACTAAAGCGCTAAACCTTCTGTCNAGCTTCNAAGTCA
rJMSF035P09- CGCACCCTTGAACCTCAACTAANGNGCTAAACCTTCNGTCGAGCTTCGAAGTCANGNGGA
rJMSF036G01- CGCACCCTTGAACCTCAACTAAAGCGCTAAACCTTCTGTCGAGCTTCGAAGTCATGTGGA
____________________________________________________________
consensus CGCACCCTTGAACCTCAACTAAAGCGCTAAACCTTCTGTCGAGCTTCGAAGTCATGTGGA
. : . : . : . : . : . :
rJMSF035P09- GAGCCTCGAAATGGAANGGAGAGTTTTCGCCCACGAATAATAATGAACGACAATGCAG
rJMSF036G01- GAGCCTCGAAATGGAATGGAGAGTTTTCGCCCACGAATAATAATGAACGACAATGCAGCC
____________________________________________________________
consensus GAGCCTCGAAATGGAATGGAGAGTTTTCGCCCACGAATAATAATGAACGACAATGCAGCC
. : . : . : . : . : . :
rJMSF036G01- TCCGTAAGCCTTCTGTAATGTCCGGTCTCTCATTGATAGCTTCAAGAAACCGCCAGACAT
____________________________________________________________
consensus TCCGTAAGCCTTCTGTAATGTCCGGTCTCTCATTGATAGCTTCAAGAAACCGCCAGACAT
. : . : . : . : . : . :
rJMSF036G01- TTGGGCTCTGTCTCTCACCCAGCAATCTTCGGCATGTTTGAACTACATCGGATTCAGGTA
____________________________________________________________
consensus TTGGGCTCTGTCTCTCACCCAGCAATCTTCGGCATGTTTGAACTACATCGGATTCAGGTA
. : . : . : . : . : . :
rJMSF036G01- CTTCTACGCTACCACGAACTTCCTTGCTAAAGTAGCGCATGAGCAACAACTCCTTAACCA
JMFF042J17+ AAAGTAGCGCATGAGCAACAACTCCTTAACCA
JMSF035P09+ AAAGTAGCGCATGAGCAACAACTCNTTAACCA
JMSF036G01+ CATGAGCAACAACTCCTTAACCA
____________________________________________________________
consensus CTTCTACGCTACCACGAACTTCCTTGCTAAAGTAGCGCATGAGCAACAACTCCTTAACCA
. : . : . : . : . : . :
rJMSF036G01- AACTACACATGCCGCAAAAGTAAAGCAGATTTGACATAACCTTATTACATAGCCATTCCG
JMFF042J17+ AACTACACATGCCGCAAAAGTAAAGCAGATTTGACATAACCTTATTACATAGCCATTCCG
JMSF035P09+ AACTACACATGCCGCAAAAGTAAAGCAGATTTGACATAACCTTATTACATAGCCATTCCG
JMSF036G01+ AANTACACATGCCGCAAAAGTAAAGCAGATTTGACATAACCTTATTACATAGCCANTCCG
____________________________________________________________
consensus AACTACACATGCCGCAAAAGTAAAGCAGATTTGACATAACCTTATTACATAGCCATTCCG
. : . : . : . : . : . :
rJMSF036G01- TCCATGAGGGCGCTTTGCACAGA
JMFF042J17+ TCCATGAGGGCGCTTTGCACAGAGGGGAAACAAGAATCAGACCCATAACACGTTTCGTGT
JMFF031P16+ TGAGGGCGCTTTGCACAGAGGGGAAACAAGAATCAGACCCATAACACGTTTCGTGT
JMSF035P09+ TCCATGAGGGCGCTTTGCACAGAGGGGAAACAAGAATCAGACCCATAACACGTTTCGTGT
JMSF036G01+ TCCATGAGGGCGCTTTGCACAGAGGGGAAACAAGAATCAGACCCATAACACGTTTCGTGT
____________________________________________________________
consensus TCCATGAGGGCGCTTTGCACAGAGGGGAAACAAGAATCAGACCCATAACACGTTTCGTGT
. : . : . : . : . : . :
JMFF042J17+ ATTTTATCGCAAACAGAGTAAGAACATAAGCTCCAGCTGTAACTCCCATACACACCACTG
JMFF031P16+ ATTTTATCGCAAACAGAGTAAGAACATAAGCTCCAGCTGTAACTCCCATACACACCACTG
JMSF035P09+ ATTTTATCGCAAACAGAGTAAGAACATAAGCTCCAGCTGTAACTCCCATACACACCACTG
JMSF036G01+ ATTTTATCGCAAACAGAGTAAGAACATAAGCTCCAGCTGTAACTCCCATACACACCACTG
____________________________________________________________
consensus ATTTTATCGCAAACAGAGTAAGAACATAAGCTCCAGCTGTAACTCCCATACACACCACTG
. : . : . : . : . : . :
JMFF042J17+ CACCAAGTCCGAAGTAATCAAGAACCTCAGTAATCTGGTCTGCTAAATCATCTACGGATA
JMFF031P16+ CACCAAGTCCGAAGTAATCAAGAACCTCAGTAATCTGGTCTGCTAAATCATCTACGGATA
JMSF035P09+ CACCAAGTCNGAAGTAATCAAGAACCTCAGTAATCTGGTNTGCTAAATCATCTACGGATA
JMSF036G01+ CACCAAGTCNGAAGTAATCAAGAACCTCAGTAATCTGGTNTGCTAAATCATNTACGGATA
____________________________________________________________
consensus CACCAAGTCCGAAGTAATCAAGAACCTCAGTAATCTGGTCTGCTAAATCATCTACGGATA
. : . : . : . : . : . :
JMFF042J17+ ATACTGCCTCATCAGGACTAATTGTAGTAGCTCCCAACTCATGCCCAGGAGGACTTATAT
JMFF031P16+ ATACTGCCTCATCAGGACTAATTGTAGTAGCTCCCAACTCATGCCCAGGAGGACTTATAT
JMSF035P09+ ATACTGCCTCATCAGGACTAATTGTAGTAGCTCCCAACTCATGCCCAGGAGGACTTATAT
JMSF036G01+ ATACTGCCTCATCAGGACTAATTGTAGTAGCTCCCAACTCATGCCCAGGAGGACTTATAT
____________________________________________________________
consensus ATACTGCCTCATCAGGACTAATTGTAGTAGCTCCCAACTCATGCCCAGGAGGACTTATAT
. : . : . : . : . : . :
JMFF042J17+ GGTATATAGAGAAATTATGAAGTAGCAAAGAAAATGCTTCGGGACAAAAGAACAATCCTT
JMFF031P16+ GGTATATAGAGAAATTATGAAGTAGCAAAGAAAATGCTTCGGGACAAAAGAACAATCCTT
JMSF035P09+ GGTATATAGAGAAATTATGAAGTAGCAAAGAAAATGCTTCGGGACAAAAGAACAATCCTT
JMSF036G01+ GGTATATAGAGAAATTATGAAGTAGCAAAGAAAATGCTTCGGGACAAAAGAACAATCCTT
____________________________________________________________
consensus GGTATATAGAGAAATTATGAAGTAGCAAAGAAAATGCTTCGGGACAAAAGAACAATCCTT
. : . : . : . : . : . :
JMFF042J17+ GGAAACACGACATATAATTCAAAGCCAGATCAGGGTAGGTAATAAGAGCGGGCTTGTCCT
JMFF031P16+ GGAAACACGACATATAATTCAAAGCCAGATCAGGGTAGGTAATAAGAGCGGGCTTGTCCT
JMSF035P09+ GGAAACACGACATATAATTCAAAGCCAGATCAGGGTAGGTAATAAGAGCGGGCTTGTCCT
JMSF036G01+ GGAAACACGACATATAATTCAAAGCCAGATCAGGGTAGGTAATAAGAGCGGGCTTGTCCT
____________________________________________________________
consensus GGAAACACGACATATAATTCAAAGCCAGATCAGGGTAGGTAATAAGAGCGGGCTTGTCCT
. : . : . : . : . : . :
JMFF042J17+ GGTCTCCAAAAACAGTAACGGAGATGGAACCATGGCCAGTTTTTACAATATGCTCCTTTC
JMFF031P16+ GGTCTCCAAAAACAGTAACGGAGANGGAACCATGGCCAGTTTTTACAATATGCTCCTTTC
JMSF035P09+ GGTCTCCAAAAACAGTAACGGAGANGGAACCATGGCCAGTTTTTACAATATGCTCCTTTC
JMSF036G01+ GGTCTCCAAAAACAGTAACGGAGANGGAACCANGGCCAGTTTTTACAATATGCTCCTTTC
____________________________________________________________
consensus GGTCTCCAAAAACAGTAACGGAGATGGAACCATGGCCAGTTTTTACAATATGCTCCTTTC
. : . : . : . : . : . :
JMFF042J17+ CGGCGAGGGAGATGGTATCAATGTCGACCGACACAGAGTCGCTTGAGTCTCCCATTGCCG
JMFF031P16+ CGGCGAGGGAGATGGTATCAATGTCGACCGACACAGAGTCGCTTGAGTCTCCCATTGCCG
JMSF035P09+ CGGCGAGGGAGATGGTATCAATGTCGACCGACACAGAGTCGCTTGAGTCTCCCATNGCCG
JMSF036G01+ CGGCGAGGGAGATGGTATCAATGTCGACCGACACAGAGTCGCTTGAGTCTCCCATNGCCG
____________________________________________________________
consensus CGGCGAGGGAGATGGTATCAATGTCGACCGACACAGAGTCGCTTGAGTCTCCCATTGCCG
. : . : . : . : . : . :
JMFF042J17+ CCGCACTCTATCGCGCTATGTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTC
JMFF031P16+ CCGCACTCTATCGCGCTATGTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTC
JMSF035P09+ CCGCACTCTATCGCGCTATGTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTC
JMSF036G01+ CCGCACTCTATCGCGCTATGTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTC
____________________________________________________________
consensus CCGCACTCTATCGCGCTATGTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTC
. : . : . : . : . : . :
JMFF042J17+ TCTTGAAA
JMFF031P16+ TCTTGAAA
JMSF035P09+ TCTTGAAA
JMSF036G01+ TCTTGAAATGCGTTGGATTTGGGAGCCATACTCATATATATACGAATCTCCCTATCTCCT
____________________________________________________________
consensus TCTTGAAATGCGTTGGATTTGGGAGCCATACTCATATATATACGAATCTCCCTATCTCCT