Contig 012098:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024G07Sequence267012098 (2)ref|XP_006351620.1|6e-05PREDICTED: thermospermine synthase ACAULIS5-like [Solanum tuberosum]690012685 (2)emb|CDP13454.1|8e-60unnamed protein product [Coffea canephora]
JMSF036A23Sequence620012098 (2)emb|CDP13454.1|1e-49unnamed protein product [Coffea canephora]700012685 (2)emb|CDP13454.1|1e-60unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF036A23+                                                   TCGATATCACACATGACCAC
                      ____________________________________________________________
consensus                                                     TCGATATCACACATGACCAC
 
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JMSF036A23+           TTTGTCAATGGACTTGTGCCTCAGTGCTTCCCGTGCTGCAGAGCCTTCACCACCTCCCAT
                      ____________________________________________________________
consensus             TTTGTCAATGGACTTGTGCCTCAGTGCTTCCCGTGCTGCAGAGCCTTCACCACCTCCCAT
 
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JMSF036A23+           TATGAACACAGTTTTTTGGGTTAGGGTGACATAAGAGAGCTGGATGAATTAAGCATTCAT
                      ____________________________________________________________
consensus             TATGAACACAGTTTTTTGGGTTAGGGTGACATAAGAGAGCTGGATGAATTAAGCATTCAT
 
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JMSF036A23+           GGTAGATGAACTCATCAATCTCTGCACTCTGCATCTTTCCATCTATCACCAACACCTTCC
                      ____________________________________________________________
consensus             GGTAGATGAACTCATCAATCTCTGCACTCTGCATCTTTCCATCTATCACCAACACCTTCC
 
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JMFF024G07+                                                                      A
JMSF036A23+           CAAACCTCTTTGTGTCCAAGAGAGCAATGTCCTGGTACTCGCTTTTTCCTCTGTGCAGCA
                      ____________________________________________________________
consensus             CAAACCTCTTTGTGTCCAAGAGAGCAATGTCCTGGTACTCGCTTTTTCCTCTGTGCAGCA
 
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JMFF024G07+           TCCTGTTGAGGGCAAAAGACCATTTGAGATCAACATCAATCTCTTCCTCAAACCAAGACC
JMSF036A23+           TCCTGTTGAGGGCAAAAGACCATTTGAGATCAACATCAATCTCTTCCTCAAACCAAGACC
                      ____________________________________________________________
consensus             TCCTGTTGAGGGCAAAAGACCATTTGAGATCAACATCAATCTCTTCCTCAAACCAAGACC
 
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JMFF024G07+           CATCAGTGAAATCATTATTAATAACCTCCATGGGAGCTGCAATCTCAAGCTTTGGGTGGT
JMSF036A23+           CATCAGTGAAATCATTATTAATAACCTCCATGGGAGCTGCAATCTCAAGCTTTGGGTGGT
                      ____________________________________________________________
consensus             CATCAGTGAAATCATTATTAATAACCTCCATGGGAGCTGCAATCTCAAGCTTTGGGTGGT
 
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JMFF024G07+           CACAATGGAGCTTATTAGAGAAAGTGGTGTTGCTGCAATGGAGCAATTCCACACTGCCTT
JMSF036A23+           CACAATGGAGCTTATTAGAGAAAGTGGTGTTGCTGCAATGGAGCAATTCCACACTGCCTT
                      ____________________________________________________________
consensus             CACAATGGAGCTTATTAGAGAAAGTGGTGTTGCTGCAATGGAGCAATTCCACACTGCCTT
 
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JMFF024G07+           CACTACCCATAGCTTAAAAAGGCTATTAATTAAAGGCTTCAAGAAGAAGAAGAAGAAGAA
JMSF036A23+           CACTACCCATAGCTTAAAAAGGCTATTAATTAAAGGCTTCAAGAAGAAGAAGAAGAAGAA
                      ____________________________________________________________
consensus             CACTACCCATAGCTTAAAAAGGCTATTAATTAAAGGCTTCAAGAAGAAGAAGAAGAAGAA
 
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JMFF024G07+           GAAGAAGAAGAAGAAGAAGAAGAAGA                                  
JMSF036A23+           GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGACCGAAAATAAAGAGAAAACAACAA
                      ____________________________________________________________
consensus             GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGACCGAAAATAAAGAGAAAACAACAA
 
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JMSF036A23+           AGAAAGCGAGCGAATGAAGAAAACGTGAAGACGAGAAAAAACTAAGTTAAAAACAAGTTC
                      ____________________________________________________________
consensus             AGAAAGCGAGCGAATGAAGAAAACGTGAAGACGAGAAAAAACTAAGTTAAAAACAAGTTC