Contig 012095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017C14Sequence558012095 (8)ref|XP_009600672.1|5e-66PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana tomentosiformis]693006976 (7)ref|XP_009769232.1|6e-88PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF045B03Sequence604012095 (8)ref|XP_009600671.1|1e-64PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana tomentosiformis]496006976 (7)ref|XP_009600671.1|1e-45PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana tomentosiformis]
JMFF045B13Sequence642012095 (8)ref|XP_009789770.1|3e-56PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]595006976 (7)ref|XP_009769232.1|3e-74PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF047D11Sequence638012095 (8)ref|XP_009600672.1|2e-68PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana tomentosiformis]626006976 (7)ref|XP_009769232.1|9e-52PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF049E07Sequence548012095 (8)ref|XP_009789770.1|8e-38PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]549006976 (7)ref|XP_009769232.1|2e-70PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF051J15Sequence612012095 (8)ref|XP_009789770.1|3e-52PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]600006976 (7)ref|XP_009769232.1|2e-51PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFS078G07Sequence625012095 (8)ref|XP_009789770.1|4e-52PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]
JMSF035J01Sequence658012095 (8)ref|XP_009789770.1|6e-54PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF045B03+                                  ACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
JMFF017C14+                                  ACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
JMFF047D11+                  AACTATCTGCTTCTCTACCCATGGGTAGGATTCATTCACCAGCTNTGCATCCC
JMFF045B13+                                                                      C
                      ____________________________________________________________
consensus                    AACTATCTGCTTCTCTACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
 
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JMFF045B03+           ACCCTGCTTTCTGGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF017C14+           ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF047D11+           ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF051J15+            CCCTGCTTTCTGNATATAACTGGGGCTAGCTCTAGTGTAGAAGCCGGCGTGNATGCAAG
JMFF045B13+           ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFS078G07+                       TGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMSF035J01+             CCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
                      ____________________________________________________________
consensus             ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
 
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JMFF045B03+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF017C14+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF047D11+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF051J15+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF045B13+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF049E07+                              GGCCCGGGAATGAAAGACGCCGTCGGTGGAGACGAAGACCT
JMFS078G07+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMSF035J01+           TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGATGAAGACCT
                      ____________________________________________________________
consensus             TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
 
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JMFF045B03+           GTGAGGCGGACGACGGTGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF017C14+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF047D11+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF051J15+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF045B13+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF049E07+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFS078G07+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMSF035J01+           GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
                      ____________________________________________________________
consensus             GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
 
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JMFF045B03+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF017C14+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF047D11+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF051J15+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF045B13+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF049E07+           CGTTGAGTTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFS078G07+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMSF035J01+           CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
                      ____________________________________________________________
consensus             CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
 
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JMFF045B03+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF017C14+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF047D11+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF051J15+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF045B13+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF049E07+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFS078G07+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMSF035J01+           ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
                      ____________________________________________________________
consensus             ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
 
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JMFF045B03+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF017C14+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF047D11+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF051J15+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF045B13+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF049E07+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFS078G07+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMSF035J01+           CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
                      ____________________________________________________________
consensus             CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
 
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JMFF045B03+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF017C14+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF047D11+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF051J15+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF045B13+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF049E07+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFS078G07+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMSF035J01+           CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
                      ____________________________________________________________
consensus             CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
 
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JMFF045B03+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF017C14+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF047D11+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF051J15+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF045B13+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF049E07+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFS078G07+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMSF035J01+           TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
                      ____________________________________________________________
consensus             TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
 
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JMFF045B03+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF017C14+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCC                     
JMFF047D11+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF051J15+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF045B13+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF049E07+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFS078G07+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMSF035J01+           AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
                      ____________________________________________________________
consensus             AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
 
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JMFF045B03+           CAATCTATCTCTCTCTCTTCAAAGTGG                                 
JMFF047D11+           CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTT               
JMFF051J15+           CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTT               
JMFF045B13+           CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMFF049E07+           CAATCTATCTCTCTCTCTTGTAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMFS078G07+           CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMSF035J01+           CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
                      ____________________________________________________________
consensus             CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
 
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JMFF045B13+           TAATTTTCATACATATATACACACACC                                 
JMFF049E07+           TAATTTTCATACATATATACACACACC                                 
JMFS078G07+           TAATTTTCATACATATATACACACACCCTCTAATGTT                       
JMSF035J01+           TAATTTTCATACATATATACACACACCCTCTAATGTTAGTTGAAACTCGAGTTATATACC
                      ____________________________________________________________
consensus             TAATTTTCATACATATATACACACACCCTCTAATGTTAGTTGAAACTCGAGTTATATACC