Contig 012093:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035D21Sequence697012093 (2)ref|XP_004253440.1|1e-71PREDICTED: probable inactive receptor kinase At4g23740, partial [Solanum lycope636014132 (2)emb|CDP05105.1|3e-77unnamed protein product [Coffea canephora]
JMSF052A23Sequence702012093 (2)ref|XP_006350601.1|4e-73PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Solanum864014132 (2)emb|CDP05105.1|1e-112unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF052A23+                             TTCTTTCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
JMSF035D21+                                  TCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
                      ____________________________________________________________
consensus                               TTCTTTCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
 
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JMSF052A23+           CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
JMSF035D21+           CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
                      ____________________________________________________________
consensus             CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
 
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JMSF052A23+           TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
JMSF035D21+           TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
                      ____________________________________________________________
consensus             TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
 
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JMSF052A23+           GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
JMSF035D21+           GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
                      ____________________________________________________________
consensus             GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
 
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JMSF052A23+           AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
JMSF035D21+           AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
                      ____________________________________________________________
consensus             AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
 
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JMSF052A23+           GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
JMSF035D21+           GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
                      ____________________________________________________________
consensus             GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
 
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JMSF052A23+           CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
JMSF035D21+           CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
                      ____________________________________________________________
consensus             CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
 
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JMSF052A23+           TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
JMSF035D21+           TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
                      ____________________________________________________________
consensus             TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
 
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JMSF052A23+           GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
JMSF035D21+           GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
                      ____________________________________________________________
consensus             GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
 
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JMSF052A23+           CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
JMSF035D21+           CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
                      ____________________________________________________________
consensus             CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
 
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JMSF052A23+           AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
JMSF035D21+           AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
                      ____________________________________________________________
consensus             AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
 
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JMSF052A23+           ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT
JMSF035D21+           ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT
                      ____________________________________________________________
consensus             ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT