Contig 012087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033M07Sequence671012087 (2)ref|NP_001275477.1|1e-72nitric oxide synthase-associated protein I [Solanum tuberosum] gb|ADD63989.1| ni
JMSF034M07Sequence159012087 (2)

Alignment

This contig is upended


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JMSF033M07+                                                           ATACGAGCCAAA
                      ____________________________________________________________
consensus                                                             ATACGAGCCAAA
 
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JMSF033M07+           AAGCTGCCATTGAAGTCTACAATATCAACCAGTTTGACAACCAAAGCTTTCTCATGGCGC
                      ____________________________________________________________
consensus             AAGCTGCCATTGAAGTCTACAATATCAACCAGTTTGACAACCAAAGCTTTCTCATGGCGC
 
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JMSF033M07+           AAATGGGATAATTTTTCACGAAGCTCTTCAGCTGAAACAAATTGCTTCCCACCAGAATAA
                      ____________________________________________________________
consensus             AAATGGGATAATTTTTCACGAAGCTCTTCAGCTGAAACAAATTGCTTCCCACCAGAATAA
 
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JMSF033M07+           CCCCCATTTCCACCTACAGCAGTAATCATGTGGCCATGAGACAATAGGTGGCACCTTCCA
                      ____________________________________________________________
consensus             CCCCCATTTCCACCTACAGCAGTAATCATGTGGCCATGAGACAATAGGTGGCACCTTCCA
 
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JMSF033M07+           CAAAGAATTGTTCTAAGCTGATGATGTTTCTTCTTCAAATCATAGGTTTCATTGTCAACA
                      ____________________________________________________________
consensus             CAAAGAATTGTTCTAAGCTGATGATGTTTCTTCTTCAAATCATAGGTTTCATTGTCAACA
 
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JMSF033M07+           TAGCCGGGAGCATCGATTTCGGATGTCTGTAATGGAGCTCCGCACCCGTAACAGCTCGGA
                      ____________________________________________________________
consensus             TAGCCGGGAGCATCGATTTCGGATGTCTGTAATGGAGCTCCGCACCCGTAACAGCTCGGA
 
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JMSF033M07+           GCCAAAGTCGAGAATTTCAGGAGCTTCTCCTTCTTTTGCTTTTTCTTCTTCGTCGCGGCT
                      ____________________________________________________________
consensus             GCCAAAGTCGAGAATTTCAGGAGCTTCTCCTTCTTTTGCTTTTTCTTCTTCGTCGCGGCT
 
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JMSF033M07+           TTCACGGATTCCAAAGCAGACACGGAATGCTGGCGCTGAATGAACATATCTCCTCGTGTC
                      ____________________________________________________________
consensus             TTCACGGATTCCAAAGCAGACACGGAATGCTGGCGCTGAATGAACATATCTCCTCGTGTC
 
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JMSF033M07+           GGAGCCGCAGCTCCGGTCCCCTCGGGTTCGGTCCATGAGTGTCTGCAGGTGATGACTTCG
                      ____________________________________________________________
consensus             GGAGCCGCAGCTCCGGTCCCCTCGGGTTCGGTCCATGAGTGTCTGCAGGTGATGACTTCG
 
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JMSF033M07+           GGTTTACGGATTCGGATCCTGGTGATATTCTGTTTATGGTTAGGGAGAGGGAACGGAGTG
JMSF034M07+                                GTGATATTTTGTTTANGGNTAGGGAGAGGGAACGGAGTG
                      ____________________________________________________________
consensus             GGTTTACGGATTCGGATCCTGGTGATATTTTGTTTATGGTTAGGGAGAGGGAACGGAGTG
 
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JMSF033M07+           ATGGAGGAGAGGGAGGAGAGAGAGAAGGGTTTAGGCGCCATTTTCATGGGGTGCTGTCAA
JMSF034M07+           ATGGAGGAGAGGGAGGAGAGAGAGAAGGGNNTAGGCNCCATTTTCANGGGNTGCNGTCAA
                      ____________________________________________________________
consensus             ATGGAGGAGAGGGAGGAGAGAGAGAAGGGTTTAGGCGCCATTTTCATGGGGTGCTGTCAA
 
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JMSF033M07+           TGGCGAAGAGATAACGAAACTTTTCCCAGAACACTCAA                      
JMSF034M07+           TGGCGAAGAGATAACGAAACTTTTCCCAGAACACTCAATGTAGAAGCTGATATGCATTCC
                      ____________________________________________________________
consensus             TGGCGAAGAGATAACGAAACTTTTCCCAGAACACTCAATGTAGAAGCTGATATGCATTCC