| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016F21 | Sequence | 562 | 012078 (4) | ref|XP_006340682.1| | 7e-77 | PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum] | 673 | 005416 (4) | emb|CDP01951.1| | 2e-26 | unnamed protein product [Coffea canephora] |
| JMFF023H23 | Sequence | 491 | 012078 (4) | ref|XP_006340682.1| | 4e-53 | PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum] | 783 | 005416 (4) | emb|CDP01951.1| | 4e-48 | unnamed protein product [Coffea canephora] |
| JMFS045D06 | Sequence | 544 | 012078 (4) | ref|XP_006340682.1| | 4e-51 | PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum] | |||||
| JMSF032J23 | Sequence | 671 | 012078 (4) | ref|XP_006340682.1| | 4e-51 | PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum] | 727 | 005416 (4) | emb|CDP01951.1| | 2e-50 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF016F21+ TGAATCCATTACCATATTGTCCAATTGTTGTGTTGGATGTCTTTGATGAGTA
____________________________________________________________
consensus TGAATCCATTACCATATTGTCCAATTGTTGTGTTGGATGTCTTTGATGAGTA
. : . : . : . : . : . :
JMFF016F21+ GCCCAAACTCATGCATTTTCGAAGACGTCCTGGATCCATCCCACCACCATCATCATGAAA
JMFF023H23+ CCATCATCATGAAA
JMFS045D06+ TCATCATGATA
JMSF032J23+ TCATCATGAAA
____________________________________________________________
consensus GCCCAAACTCATGCATTTTCGAAGACGTCCTGGATCCATCCCACCACCATCATCATGAAA
. : . : . : . : . : . :
JMFF016F21+ CAGTAAGGCAGGAGAGTTATCCCTCATGTTATATATTCTATCAACCTTCACGAAAGTTGC
JMFF023H23+ CAGTAAGGCAGGAGAGTTATCCCTCATGTTATATATTCTATCAACCTTCACGAAAGTTGC
JMFS045D06+ CAGTAAGGCAGGAGAGTTATCCCTCATGTTATATATTCTATCAACCCTCACGAAAGTTGC
JMSF032J23+ CAGTAAGGCAGGAGAGTTATCCCTCATGTTATATATTCTATCAACCTTCACGAAAGTTGC
____________________________________________________________
consensus CAGTAAGGCAGGAGAGTTATCCCTCATGTTATATATTCTATCAACCTTCACGAAAGTTGC
. : . : . : . : . : . :
JMFF016F21+ ACCATTGTTTATCTCATCCACAGCATTATCCAATAGTTCAGCAATCGCTCCAAATGCCCA
JMFF023H23+ ACCATTGTTTATCTCATCCACAGCATTATCCAATAGTTCAGCAATCGCTCCAAATGCCCA
JMFS045D06+ ACCATTGTTTATCTCATCCACAGCATTATCCAATAGTTCAGCAATCGCTCCAAATGCCCA
JMSF032J23+ ACCATTGTTTATCTCATCCACAGCATTATCCAATAGTTCAGCAATCGCTCCAAATGCCCA
____________________________________________________________
consensus ACCATTGTTTATCTCATCCACAGCATTATCCAATAGTTCAGCAATCGCTCCAAATGCCCA
. : . : . : . : . : . :
JMFF016F21+ TTTGTGAGAAGTGGCATTAGAATGTAAAAACTTTGGATGTACACGTGCATGCTCTAGCTC
JMFF023H23+ TTTGTGAGAAGTGGCATTAGAATGTAAAAACTTTGGATGTACACGTGCATGCTCTAGCTC
JMFS045D06+ TTTGTGATAAGTGGCATTAGAATGTAAAAACTTTGGATGTACACGTGCATGCTCTAGCTC
JMSF032J23+ TTTGTGAGAAGTGGCATTAGAATGTAAAAACTTTGGATGTACACGTGCATGCTCTAGCTC
____________________________________________________________
consensus TTTGTGAGAAGTGGCATTAGAATGTAAAAACTTTGGATGTACACGTGCATGCTCTAGCTC
. : . : . : . : . : . :
JMFF016F21+ ACCTTCAATAGCTACTGCTCTAGTGGAGGCGACTTCATAATTCCCCGCCTTCCAGAAACT
JMFF023H23+ ACCTTCAATAGCTACTGCTCTAGTGGAGGCGACTTCATAATTCCCCGCCTTCCAGAAACT
JMFS045D06+ ACCTTCAATAGCTACTGCTCTAGTGGAGGCGACTTCATAATTCCCCGCCTTCCAGAAACT
JMSF032J23+ ACCTTCAATAGCTACTGCTCTAGTGGAGGCGACTTCATAATTCCCCGCCTTCCAGAAACT
____________________________________________________________
consensus ACCTTCAATAGCTACTGCTCTAGTGGAGGCGACTTCATAATTCCCCGCCTTCCAGAAACT
. : . : . : . : . : . :
JMFF016F21+ CCGAGACTCCAGTTGCCGATGATTCTGAGCAGGAGGAGCAACTGGTCCAGCGCCATGAAC
JMFF023H23+ CCGAGACTCCAGTTGCCGATGATTCTGAGCAGGAGGAGCAACTGGTCCAGCGCCATGAAC
JMFS045D06+ CCGAGACTCCAGTTGCCGATGATTCTGAGCAGGAGGAGCAACTGGTCCAGCGCCATGAAC
JMSF032J23+ CCGAGACTCCAGTTGCCGATGATTCTGAGCAGGAGGAGCAACTGGTCCAGCGCCATGAAC
____________________________________________________________
consensus CCGAGACTCCAGTTGCCGATGATTCTGAGCAGGAGGAGCAACTGGTCCAGCGCCATGAAC
. : . : . : . : . : . :
JMFF016F21+ ACCAGGTGGTTTGCTTTGTGGATTTTTGACAGTAGTCATTACATCCCGGGCGCTGCTTTT
JMFF023H23+ ACCAGGTGGTTTGCTTTGTGGATTTTTGACAGTAGTCATTACATCCCGGGCGCTGCTTTT
JMFS045D06+ ACCAGGTGGTTTGCTTTGTGGATTTTTGACAGTAGTCATTACATCCCGGGCGCTGCTTTT
JMSF032J23+ ACCAGGTGGTTTGCTTTGTGGATTTTTGACAGTAGTCATTACATCCCGGGCGCTGCTTTT
____________________________________________________________
consensus ACCAGGTGGTTTGCTTTGTGGATTTTTGACAGTAGTCATTACATCCCGGGCGCTGCTTTT
. : . : . : . : . : . :
JMFF016F21+ TCCGGCAGCATTGGTGCCGGGACTGCCTTCGTCGTCGCTGCTATCGATTTCAACAACATC
JMFF023H23+ TCCGGCAGCATTGGTGCCGGGACTGCCTTCGTCGTCGCTGCTATCGATTTCAACAACATC
JMFS045D06+ TCCGGCAGCATTGGTGCCGGGACTGCCTTCGTCGTCGCTGCTATCGATTTCAACAACATC
JMSF032J23+ TCCGGCAGCATTGGTGCCGGGACTGCCTTCGTCGTCGCTGCTATCGATTTCAACAACATC
____________________________________________________________
consensus TCCGGCAGCATTGGTGCCGGGACTGCCTTCGTCGTCGCTGCTATCGATTTCAACAACATC
. : . : . : . : . : . :
JMFF016F21+ AATGGGAACCTTGTTCCGTTTAGGTGC
JMFF023H23+ AATGGGAACCTTGTTCCGTTTAGGTGCCATTGTAATAGAATCACA
JMFS045D06+ AATGGGAACCTTGTTCCGTTTAGGTGCCATTGTAATAGAATCACATTTGACAGTGAGCCT
JMSF032J23+ AATGGGAACCTTGTTCCGTTTAGGTGCCATTGTAATAGAATCACATTTGACAGTGAGCCT
____________________________________________________________
consensus AATGGGAACCTTGTTCCGTTTAGGTGCCATTGTAATAGAATCACATTTGACAGTGAGCCT
. : . : . : . : . : . :
JMFS045D06+ GTTGTTAGGGTTTAGCTCCGAATAACGCTTTTCCTTTACCAAACTGGAGGTT
JMSF032J23+ GTTGTTAGGGTTTAGCTCCGAATAACGCTTTTCCTTTACCAAACTGGAGGTTTCTGGGAT
____________________________________________________________
consensus GTTGTTAGGGTTTAGCTCCGAATAACGCTTTTCCTTTACCAAACTGGAGGTTTCTGGGAT
. : . : . : . : . : . :
JMSF032J23+ TAATGAGGAGAGGGAGTGTAATTTCCCTGCTAAGTATTTAAAATCACTTGTAAAACTCGA
____________________________________________________________
consensus TAATGAGGAGAGGGAGTGTAATTTCCCTGCTAAGTATTTAAAATCACTTGTAAAACTCGA
. : . : . : . : . : . :
JMSF032J23+ AATATTCTTCTTCTGGGTGTGGCGTATGCTGTGTTAATGGCGCTTTGATTCAAAGAGACC
____________________________________________________________
consensus AATATTCTTCTTCTGGGTGTGGCGTATGCTGTGTTAATGGCGCTTTGATTCAAAGAGACC