| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019P18 | Sequence | 584 | 012077 (5) | emb|CDP12040.1| | 6e-24 | unnamed protein product [Coffea canephora] | 707 | 004304 (5) | ref|XP_009589061.1| | 7e-34 | PREDICTED: uncharacterized protein At1g76660 [Nicotiana tomentosiformis] |
| JMSF013M08 | Sequence | 519 | 012077 (5) | ref|XP_009589061.1| | 4e-16 | PREDICTED: uncharacterized protein At1g76660 [Nicotiana tomentosiformis] | 711 | 004304 (5) | ref|XP_009589061.1| | 1e-27 | PREDICTED: uncharacterized protein At1g76660 [Nicotiana tomentosiformis] |
| JMSF020B24 | Sequence | 687 | 012077 (5) | gb|KDP25415.1| | 7e-63 | hypothetical protein JCGZ_20571 [Jatropha curcas] | 731 | 004304 (5) | ref|XP_006343965.1| | 3e-35 | PREDICTED: uncharacterized protein At1g76660-like [Solanum tuberosum] |
| JMSF032J11 | Sequence | 697 | 012077 (5) | gb|KDP25415.1| | 1e-44 | hypothetical protein JCGZ_20571 [Jatropha curcas] | 773 | 004304 (5) | ref|XP_009589061.1| | 3e-22 | PREDICTED: uncharacterized protein At1g76660 [Nicotiana tomentosiformis] |
| JMSF037D24 | Sequence | 722 | 012077 (5) | ref|XP_009589061.1| | 3e-66 | PREDICTED: uncharacterized protein At1g76660 [Nicotiana tomentosiformis] | 508 | 004304 (5) | emb|CBI22685.3| | 7e-17 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF037D24+ GGGAAACATATTACGGGCACCAACATTTTGA
____________________________________________________________
consensus GGGAAACATATTACGGGCACCAACATTTTGA
. : . : . : . : . : . :
JMSF020B24+ TAGGATCAAGAAGCTTAGCAAATGGCACCTCAGGTGAAGAAGGTGTGGTTAAGTGC
JMSF037D24+ AGGTTAGGATCAAGAAGCTTAGCAAATGGCACCTCAGGTGAAGAAGGTGTGGTTAAGTGC
____________________________________________________________
consensus AGGTTAGGATCAAGAAGCTTAGCAAATGGCACCTCAGGTGAAGAAGGTGTGGTTAAGTGC
. : . : . : . : . : . :
JMSF020B24+ ACCGACTCAGGAGGAGGAGTAAAGGGAGCTGTAGAAGGTTCTGTGGTGAATGTTGAAAAA
JMSF037D24+ ACCGACTCAGGAGGAGGAGTAAAGGGAGCTGTAGAAGGTTCTGTGGTGAATGTTGAAAAA
JMSF032J11+ GGGAGCTGTAGAAGGTTCTGTGGTGAATGTTGAAAAA
____________________________________________________________
consensus ACCGACTCAGGAGGAGGAGTAAAGGGAGCTGTAGAAGGTTCTGTGGTGAATGTTGAAAAA
. : . : . : . : . : . :
JMSF020B24+ ACTGGGGGAGAAACTAGCTGAGTCTCATGAGCATATGGTCCAGTTGCAAAAATTGAATTA
JMSF037D24+ ACTGGGGGAGAAACTAGCTGAGTCTCATGAGCATATGGTCCAGTTGCAAAAATTGAATTA
JMSF032J11+ ACTGGGGGAGAAACTAGCTGAGTCTCATGAGCATATGGTCCAGTTGCAAAAATTGAATTA
____________________________________________________________
consensus ACTGGGGGAGAAACTAGCTGAGTCTCATGAGCATATGGTCCAGTTGCAAAAATTGAATTA
. : . : . : . : . : . :
JMSF020B24+ GGCCCACCAGGGGAGTATATGTTGGCAGACATGGAAGAAAATGATATCACACCAGCTGGG
JMSF037D24+ GGCCCACCAGGGGAGTATATGTTGGCAGACATGGAAGAAAATGATATCACACCAGCTGGG
JMFF019P18+ CCACCAGGGGAGTATATGTTGGCAGACATGGAAGAAAATGATATCACACCAGCTGGG
JMSF032J11+ GGCCCACCAGGGGAGTATATGTTGGCAGACATGGAAGAAAATGATATCACACCAGCTGGG
____________________________________________________________
consensus GGCCCACCAGGGGAGTATATGTTGGCAGACATGGAAGAAAATGATATCACACCAGCTGGG
. : . : . : . : . : . :
JMSF020B24+ GATTGAGTTGCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
JMSF037D24+ GATTGAGTTGCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
JMFF019P18+ GATTGAGTTGCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
JMSF013M08+ GCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
JMSF032J11+ GATTGAGTTGCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
____________________________________________________________
consensus GATTGAGTTGCAGAAGGAGGCTCTGACTGGAGGAAAGATACAGGAGAGGAGGGAGGTGCA
. : . : . : . : . : . :
JMSF020B24+ ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
JMSF037D24+ ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
JMFF019P18+ ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
JMSF013M08+ ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
JMSF032J11+ ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
____________________________________________________________
consensus ACAAAAGGAAGCATTATAGAGGTTGAGGTTCGAGTTGGATTATCAACTGAATGGAGACGA
. : . : . : . : . : . :
JMSF020B24+ TCTTCCCTAGGAGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
JMSF037D24+ TCTTCCCTAGGAGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
JMFF019P18+ TCTTCCCTAGGGGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
JMSF013M08+ TCTTCCCTAGGAGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
JMSF032J11+ TCTTCCCTAGGAGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
____________________________________________________________
consensus TCTTCCCTAGGAGCTGCTGTTTCAGGATCAAAGACTGCATGTACAATTCGTTTGTTCTGC
. : . : . : . : . : . :
JMSF020B24+ TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
JMSF037D24+ TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
JMFF019P18+ TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
JMSF013M08+ TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
JMSF032J11+ TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
____________________________________________________________
consensus TTTTGAGATCCAAAACACCAATATATGCTAAAACAGCTAGCCCATCTTCTCTTCTGCACC
. : . : . : . : . : . :
JMSF020B24+ TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
JMSF037D24+ TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
JMFF019P18+ TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
JMSF013M08+ TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
JMSF032J11+ TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
____________________________________________________________
consensus TGAACCGAAGCTTGAGACGCACGATTCTCAGCCGAAGCGATCGCAGTTGCAGCGGCGTTG
. : . : . : . : . : . :
JMSF020B24+ ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
JMSF037D24+ ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
JMFF019P18+ ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
JMSF013M08+ ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
JMSF032J11+ ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
____________________________________________________________
consensus ACGGTCTCCAGAGCGTCGTCCGCACTTCTCATCTCTCCACCATTCGCCCCTCGTCTCATC
. : . : . : . : . : . :
JMSF020B24+ TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
JMSF037D24+ TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
JMFF019P18+ TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
JMSF013M08+ TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
JMSF032J11+ TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
____________________________________________________________
consensus TTCTCTTTTCAATCGATCAACGAACAAATCAATCACCAAAATTCCACCGTTGTTGCAGCT
. : . : . : . : . : . :
JMSF020B24+ CCTTTCATCACCTAAACATCACTTTTTCTCT
JMSF037D24+ CCTTTCATCACCTAAACATCACTTTTTCTCT
JMFF019P18+ CCTTTCATCACCTAAACATCACTTTTTCTCTCTCGAGAAAACTATCAAACTCTGCAAGAA
JMSF013M08+ CCTTTCATCACCTAAACATCACTTTTTCTCTCTCGAGAAAACTATCAAACTCTGCAAGAA
JMSF032J11+ CCTTTCATCACCTAAACATCACTTTTTCTCTCTCGAGAAAACTATCAAACTCTGCAAGAA
____________________________________________________________
consensus CCTTTCATCACCTAAACATCACTTTTTCTCTCTCGAGAAAACTATCAAACTCTGCAAGAA
. : . : . : . : . : . :
JMFF019P18+ GACGAAGAAAACAACAAGGAGCCGGAGCGGAACACAATAC
JMSF013M08+ GACGAAGAAAACAACAAGGAGCCGGAGCGGAACACAATAC
JMSF032J11+ GACGAAGAAAACAACAAGGAGCCGGAGCGGAACACAATACAAAACCCAACCGATTCACTC
____________________________________________________________
consensus GACGAAGAAAACAACAAGGAGCCGGAGCGGAACACAATACAAAACCCAACCGATTCACTC