Contig 012070:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS059F03Sequence621012070 (2)ref|XP_009771024.1|1e-56PREDICTED: lipoxygenase 6, chloroplastic isoform X1 [Nicotiana sylvestris]
JMSF032E01Sequence562012070 (2)ref|XP_009771025.1|3e-29PREDICTED: lipoxygenase 6, chloroplastic isoform X2 [Nicotiana sylvestris]712002910 (2)gb|KDP26771.1|7e-87hypothetical protein JCGZ_17929 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS059F03+ ACCTTGACTAAAACCATGGACAACAATN
                      ____________________________________________________________
consensus ACCTTGACTAAAACCATGGACAACAATN
 
. : . : . : . : . : . :
JMFS059F03+ TGCACCAAGTACACCTCCTTGTCAAGGAAATTGGTAATCAGAGCAGCTCCTGGGCATCCA
                      ____________________________________________________________
consensus TGCACCAAGTACACCTCCTTGTCAAGGAAATTGGTAATCAGAGCAGCTCCTGGGCATCCA
 
. : . : . : . : . : . :
JMFS059F03+ AAATCCCCTGGCACCCTCAAATCAGCTGCATATTCAACTATGTATGGATTATTCTCTGAA
                      ____________________________________________________________
consensus AAATCCCCTGGCACCCTCAAATCAGCTGCATATTCAACTATGTATGGATTATTCTCTGAA
 
. : . : . : . : . : . :
JMFS059F03+ GTTTTGGGAAATCCCCTTACATAAGACCACTCTGAACTCTTCCCAGACTGGGTAACAGGA
JMSF032E01+ CTTCCCAGACTGGGTAACAGGA
                      ____________________________________________________________
consensus GTTTTGGGAAATCCCCTTACATAAGACCACTCTGAACTCTTCCCAGACTGGGTAACAGGA
 
. : . : . : . : . : . :
JMFS059F03+ TCAATGTCTTCACTGATGAGCTGAATCAAGATTCCTTTGCCAATCCCATTGATGAAAGAT
JMSF032E01+ TCAATGTCTTCACTGATGAGCTGAATCAAGATTCCTTTGCCAATCCCATTGATGAAAGAT
                      ____________________________________________________________
consensus TCAATGTCTTCACTGATGAGCTGAATCAAGATTCCTTTGCCAATCCCATTGATGAAAGAT
 
. : . : . : . : . : . :
JMFS059F03+ ACCCACTGGTCTTCAATCTTGTCAACAAGCCTCTCTCTCATCTTCTTCCTTAGAGTGATC
JMSF032E01+ ACCCACTGGTCTTCAATCTTGTCAACAAGCCTCTCTCTCATCTTCTTCCTTAGAGTGATC
                      ____________________________________________________________
consensus ACCCACTGGTCTTCAATCTTGTCAACAAGCCTCTCTCTCATCTTCTTCCTTAGAGTGATC
 
. : . : . : . : . : . :
JMFS059F03+ ACTGCCCTCACATCTATACTTGTACCAAACTCCATCAACCCCTTATTGCCCCCTTCATCT
JMSF032E01+ ACTGCCCTCACATCTATACTTGTACCAAACTCCATCAACCCCTTATTGCCCCCTTCATCT
                      ____________________________________________________________
consensus ACTGCCCTCACATCTATACTTGTACCAAACTCCATCAACCCCTTATTGCCCCCTTCATCT
 
. : . : . : . : . : . :
JMFS059F03+ AAACCTTTCTCCATCACCTTTCCAGCTGCTTCTTCCACAGTAGCCTTGCTGTCCCCACTC
JMSF032E01+ AAACCTTTCTCCATCACCTTTCCAGCTGCTTCTTCCACAGTAGCCTTGCTGTCCCCACTC
                      ____________________________________________________________
consensus AAACCTTTCTCCATCACCTTTCCAGCTGCTTCTTCCACAGTAGCCTTGCTGTCCCCACTC
 
. : . : . : . : . : . :
JMFS059F03+ CTAACCACTGCTTGTATTGTTGGCTGCCGGAGACCGGGGAATGGGGTGGCCCTTCTTCTT
JMSF032E01+ CTAACCACTGCTTGTATTGTTGGCTGCCGGAGACCGGGGAATGGGGTGGCCCTTCTTCTT
                      ____________________________________________________________
consensus CTAACCACTGCTTGTATTGTTGGCTGCCGGAGACCGGGGAATGGGGTGGCCCTTCTTCTT
 
. : . : . : . : . : . :
JMFS059F03+ GCCCGGTGGTTTCTTCCGGCACCAGAGATGACATCCGGTCGCCGGAGGTTGAGAACATGT
JMSF032E01+ GCCCGGTGGTTTCTTCCGGCACCAGAGATGACATCCGGTCGCCGGAGGTTGAGAACATGT
                      ____________________________________________________________
consensus GCCCGGTGGTTTCTTCCGGCACCAGAGATGACATCCGGTCGCCGGAGGTTGAGAACATGT
 
. : . : . : . : . : . :
JMFS059F03+ TGAATGTTTGAGCAGAAAGTTGTAGTTCTTGGTTGAACTGTTGGCATATTCTT
JMSF032E01+ TGAATGTTTGAGCAGAAAGTTGTAGTTCTTGGTTGAACTGTTGGCATATTCTTTTCTAGC
                      ____________________________________________________________
consensus TGAATGTTTGAGCAGAAAGTTGTAGTTCTTGGTTGAACTGTTGGCATATTCTTTTCTAGC
 
. : . : . : . : . : . :
JMSF032E01+ TACTCAAAACCGGATGAACACATTAAATGACTATCATTTTCTATATCTATCAAGATTTGT
                      ____________________________________________________________
consensus TACTCAAAACCGGATGAACACATTAAATGACTATCATTTTCTATATCTATCAAGATTTGT
 
. : . : . : . : . : . :
JMSF032E01+ TATACATGAGAGATAAAACATGTGGATGTGGTTGACGTTTAACAATGCTGAGTTTCGCCT
                      ____________________________________________________________
consensus TATACATGAGAGATAAAACATGTGGATGTGGTTGACGTTTAACAATGCTGAGTTTCGCCT