| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF044N07 | Sequence | 589 | 012064 (7) | gb|AGY49286.1| | 4e-63 | putative membrane bound NAC transcription factor 1 [Nicotiana benthamiana] | |||||
| JMFF051P06 | Sequence | 564 | 012064 (7) | gb|AGY49286.1| | 9e-88 | putative membrane bound NAC transcription factor 1 [Nicotiana benthamiana] | 125 | 014934 | |||
| JMSF012A13 | Sequence | 438 | 012064 (7) | gb|AGY49286.1| | 3e-56 | putative membrane bound NAC transcription factor 1 [Nicotiana benthamiana] | |||||
| JMSF018B18 | Sequence | 215 | 012064 (7) | ref|XP_009608176.1| | 65.5 | PREDICTED: uncharacterized protein LOC104102223 [Nicotiana tomentosiformis] | 793 | 024531 | ref|XP_009760820.1| | 2e-22 | PREDICTED: uncharacterized protein LOC104213101 isoform X1 [Nicotiana sylvestri |
| JMSF022K14 | Sequence | 648 | 012064 (7) | gb|AGY49286.1| | 4e-99 | putative membrane bound NAC transcription factor 1 [Nicotiana benthamiana] | |||||
| JMSF028C20 | Sequence | 697 | 012064 (7) | ref|XP_009596681.1| | 4e-79 | PREDICTED: NAC domain-containing protein 74-like [Nicotiana tomentosiformis] | 763 | 012983 (6) | ref|XP_004235375.1| | 90.1 | PREDICTED: uncharacterized protein LOC101251266 [Solanum lycopersicum] |
| JMSF031H11 | Sequence | 631 | 012064 (7) | gb|AGY49286.1| | 3e-58 | putative membrane bound NAC transcription factor 1 [Nicotiana benthamiana] | 105 | 015081 | |||
This contig is upended
. : . : . : . : . : . :
JMSF028C20+ GATCAAAACCATTAGTTCCATACTGAAACTGGACATCATTATTATTGCTAATGCAATT
____________________________________________________________
consensus GATCAAAACCATTAGTTCCATACTGAAACTGGACATCATTATTATTGCTAATGCAATT
. : . : . : . : . : . :
JMSF028C20+ TATGACATCTCCATAAAAATAGGAAGATCCAAACTCCGGCATCTGTTCATATGTGGGAGA
____________________________________________________________
consensus TATGACATCTCCATAAAAATAGGAAGATCCAAACTCCGGCATCTGTTCATATGTGGGAGA
. : . : . : . : . : . :
JMSF028C20+ ATATATAGGCCCAGTAGAAGGGTCAATAAAGAATTTCAATGCGTCTAGGTCAGGATCAGC
____________________________________________________________
consensus ATATATAGGCCCAGTAGAAGGGTCAATAAAGAATTTCAATGCGTCTAGGTCAGGATCAGC
. : . : . : . : . : . :
JMSF028C20+ TGGATTAGAAGTAATGTCTAACACTTGATCCTCGGTGGTATCAGCAATACAGCTATTGCT
____________________________________________________________
consensus TGGATTAGAAGTAATGTCTAACACTTGATCCTCGGTGGTATCAGCAATACAGCTATTGCT
. : . : . : . : . : . :
JMSF028C20+ GTTACTATCAATAGGGAAATGAACACCAGGAGTTTCCTCGGAACTCTGACCCGGAGTTAA
____________________________________________________________
consensus GTTACTATCAATAGGGAAATGAACACCAGGAGTTTCCTCGGAACTCTGACCCGGAGTTAA
. : . : . : . : . : . :
JMSF028C20+ AGGCTGTGTCTTGATGTGGCCGCTCTTCATTAATGGAGTCCCACCTTCTGATTGTTCATC
____________________________________________________________
consensus AGGCTGTGTCTTGATGTGGCCGCTCTTCATTAATGGAGTCCCACCTTCTGATTGTTCATC
. : . : . : . : . : . :
JMSF028C20+ TTCTGCAGGTGTCTTAACGACTGTAGGAGAAGAGACAATTGGATCAACCTCATCACTGTT
____________________________________________________________
consensus TTCTGCAGGTGTCTTAACGACTGTAGGAGAAGAGACAATTGGATCAACCTCATCACTGTT
. : . : . : . : . : . :
JMSF028C20+ TGAAATTTCAGCACCCTCATCCAGCTTCAACTCAACCTTCCTAAACAAACGGCAAAGCAC
JMSF022K14+ TTCAGCACCNTCATCCAGCTTCAACTCAACCTTCCTAAACAAACGGCAAAGCAC
____________________________________________________________
consensus TGAAATTTCAGCACCCTCATCCAGCTTCAACTCAACCTTCCTAAACAAACGGCAAAGCAC
. : . : . : . : . : . :
JMSF028C20+ AAAAGGAGCCTGACCAGCGTGAGTTCCATCAAATTTGTTTTCAGTTGTACGATACTCATG
JMSF022K14+ AAAAGGAGCCTGACCAGCGTGAGTTCCATCAAATTTGTTTTCAGTTGTACGATACTCATG
JMFF051P06+ AGTTCCATCAAATTTGTTTTCAGTTGTACGATACTCATG
____________________________________________________________
consensus AAAAGGAGCCTGACCAGCGTGAGTTCCATCAAATTTGTTTTCAGTTGTACGATACTCATG
. : . : . : . : . : . :
JMSF028C20+ AATCACCCAATGAGTCCTCTTCCCTTCAGGAGCTCGACCTAAGTAGTACACTAAAGTCTT
JMSF022K14+ AATCACCCAATGAGTCCTCTTCCCTTCAGGAGCTCGACCTAAGTAGTACACTAAAGTCTT
JMFF051P06+ AATCACCCAATGAGTCCTCTTCCCTTCAGGAGCTCGACCTAAGTAGTACACTAAAGTCTT
____________________________________________________________
consensus AATCACCCAATGAGTCCTCTTCCCTTCAGGAGCTCGACCTAAGTAGTACACTAAAGTCTT
. : . : . : . : . : . :
JMSF028C20+ TTTCATCCCAACCTTTGCACCCTTCCTCGACGAAATGGTCCTATCTTTGCCAGTTGCCTT
JMSF022K14+ TTTCATCCCAACCTTTGCACCCTTCCTCGACGAAATGGTCCTATCTTTGCCAGTTGCCTT
JMFF051P06+ TTTCATCCCAACCTTTGCACCCTTCCTCGACGAAATGGTCCTATCTTTGCCAGTTGCCTT
JMSF012A13+ GCCAGTTGCCTT
JMFF044N07+ ATCCCAACCTTTGCACCCTTCCTCGACGAAATGGTCCTATCTTTGCCAGTTGCCTT
JMSF031H11+ ACGAAATGGTCCTATCTTTACCAGTTGCCTT
____________________________________________________________
consensus TTTCATCCCAACCTTTGCACCCTTCCTCGACGAAATGGTCCTATCTTTGCCAGTTGCCTT
. : . : . : . : . : . :
JMSF028C20+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTG
JMSF022K14+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
JMFF051P06+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
JMSF012A13+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
JMFF044N07+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
JMSF031H11+ CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
____________________________________________________________
consensus CCAGTACCCTCGCTCTGTTGCACGATTCAACCTCTGCCCATTCTGATACTTGCGATCTTT
. : . : . : . : . : . :
JMSF022K14+ TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
JMFF051P06+ TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
JMSF012A13+ TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
JMFF044N07+ TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
JMSF031H11+ TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
____________________________________________________________
consensus TGGGCAGAAGAAGAACCATTCATTGTCATGTGATTCTACAAATGACATATCGGGCAAATC
. : . : . : . : . : . :
JMSF022K14+ CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
JMFF051P06+ CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
JMSF012A13+ CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
JMFF044N07+ CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
JMSF031H11+ CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
____________________________________________________________
consensus CCAGGGCTCATGCTTACAGATATCAACTTCGCGAATAACACTAACTTCTGCTTCCGAACC
. : . : . : . : . : . :
JMSF022K14+ GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
JMFF051P06+ GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
JMSF012A13+ GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
JMSF018B18+ ATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
JMFF044N07+ GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
JMSF031H11+ GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
____________________________________________________________
consensus GGTGATCTTCATCTTCAAATAGTGATCCACCAGCTCCTCGTCAGTCGGCCGGAACCGGTA
. : . : . : . : . : . :
JMSF022K14+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
JMFF051P06+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
JMSF012A13+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
JMSF018B18+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
JMFF044N07+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
JMSF031H11+ CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
____________________________________________________________
consensus CCCCACCGGCAGCGAGTGCAGGGGTGGTAACCCCGTCGGCCTTTCCACCTTTAGTACAGC
. : . : . : . : . : . :
JMSF022K14+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
JMFF051P06+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
JMSF012A13+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
JMSF018B18+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
JMFF044N07+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
JMSF031H11+ CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
____________________________________________________________
consensus CATCTCCACGCCGCAAAGTTCACAGAGAGAGAGAAAGAGAGAGGGTGGGAGAGATATACG
. : . : . : . : . : . :
JMSF022K14+ TATGTGC
JMFF051P06+ TATGTGCCTGCCTGTATTTTTCAAAAGAAAAACAGAGATAAA
JMSF012A13+ TATGTGC
JMSF018B18+ TATGTGCCTGCCTGTATTTTTCAAAAGAAAAACAGAGATAAAGC
JMFF044N07+ TATGTGCCTGCCTGTATTTTTCAAAAGAAAAACAGAGATAAAGCAAAAGCAAGCTGAAAA
JMSF031H11+ TATGTGCCTGCCTGTATTTTTCAAAAGAAAAACAGAGATAAAGCAAAAGCAAGCTGAAAA
____________________________________________________________
consensus TATGTGCCTGCCTGTATTTTTCAAAAGAAAAACAGAGATAAAGCAAAAGCAAGCTGAAAA
. : . : . : . : . : . :
JMFF044N07+ GTGCGAGTATTTAAGAGGATTCTGAGAAAAGCTTTAGATCTCAATTGCAGTAAGATTCCT
JMSF031H11+ GTGCGAGTATTTAAGAGGATTCTGAGAAAAGCTTTAGATCTCAATTGCAGTAAGATTCCT
____________________________________________________________
consensus GTGCGAGTATTTAAGAGGATTCTGAGAAAAGCTTTAGATCTCAATTGCAGTAAGATTCCT
. : . : . : . : . : . :
JMFF044N07+ GGAAAATTCATTTAGGGCTTTGAGTAGCCATGAAACTTCCACGAAACTTCTCT
JMSF031H11+ GGAAAATTCATTTAGGGCTTTGAGTAGCCATGAAACTTCCACGAAACTTCTCTGTGTTAA
____________________________________________________________
consensus GGAAAATTCATTTAGGGCTTTGAGTAGCCATGAAACTTCCACGAAACTTCTCTGTGTTAA
. : . : . : . : . : . :
JMSF031H11+ AAATGGGGAAGAAGAAGAAGGAGAAGAGAGAAAACTGCGAAATGAATTTCAGCTGACCTC
____________________________________________________________
consensus AAATGGGGAAGAAGAAGAAGGAGAAGAGAGAAAACTGCGAAATGAATTTCAGCTGACCTC