| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031J06 | Sequence | 568 | 012062 (7) | ref|XP_009599997.1| | 1e-83 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi | 793 | 012062 (7) | ref|XP_009599997.1| | 3e-120 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi |
| JMFF038O03 | Sequence | 570 | 012062 (7) | ref|XP_009599997.1| | 9e-63 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi | 720 | 012062 (7) | ref|XP_009599997.1| | 3e-92 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi |
| JMSF029P14 | Sequence | 675 | 012062 (7) | ref|XP_009599997.1| | 2e-117 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi | |||||
| JMSF031C09 | Sequence | 640 | 012062 (7) | ref|XP_009599997.1| | 4e-89 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi | 689 | 012062 (7) | ref|XP_009599997.1| | 9e-98 | PREDICTED: uncharacterized protein LOC104095543 isoform X2 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMFF038O03- GATTTTGCATAAATAGACA
____________________________________________________________
consensus GATTTTGCATAAATAGACA
. : . : . : . : . : . :
rJMFF038O03- AGCATCCTAATACACACACCATCGTATATCTACATTTCATGTATTGGATGTCACGTCCAA
____________________________________________________________
consensus AGCATCCTAATACACACACCATCGTATATCTACATTTCATGTATTGGATGTCACGTCCAA
. : . : . : . : . : . :
rJMFF038O03- CATTGCTAGACTTCTCAAGTCAAATCCGTAAATCGTGACATCGTTTGAGGGTTATGCTTT
____________________________________________________________
consensus CATTGCTAGACTTCTCAAGTCAAATCCGTAAATCGTGACATCGTTTGAGGGTTATGCTTT
. : . : . : . : . : . :
rJMFF038O03- CAGCTACTTCATGCCACAGTCCACTTGAAACTCCCCATTTTTTAGATACACAGCTAAATT
rJMSF031C09- AGATACACAGCTAAATT
rJMFF031J06- AGATACACAGCTAAATT
____________________________________________________________
consensus CAGCTACTTCATGCCACAGTCCACTTGAAACTCCCCATTTTTTAGATACACAGCTAAATT
. : . : . : . : . : . :
rJMFF038O03- TGCCTGGGCATCAGCTTCGGAGTTGTATTCTCTTTCAACATGGTTAATCTGGAAAGATGT
rJMSF031C09- TGCCTGGGCATCAGCTTCGGAGTTGTATTCTCTTTCAACATGGTTAATCTGGAAAGATGT
rJMFF031J06- TGCCTGGGCATCAGCTTCGGAGTTGTATTCTCTTTCAACATGGTTAATCTGGAAAGATGT
____________________________________________________________
consensus TGCCTGGGCATCAGCTTCGGAGTTGTATTCTCTTTCAACATGGTTAATCTGGAAAGATGT
. : . : . : . : . : . :
rJMFF038O03- GAATTGGTCCTTGTATTCTCTGACCACCTTTGACAGCTCGGCCATGTTCTGGTTCTTGGT
rJMSF031C09- GAATTGGTCCTTGTATTCTCTGACCACCTTTGACAGCTCGGCCATGTTCTGGTTCTTGGT
rJMFF031J06- GAATTGGTCCTTGTATTCTCTGACCACCTTTGACAGCTCGGCCATGTTCTGGTTCTTGGT
____________________________________________________________
consensus GAATTGGTCCTTGTATTCTCTGACCACCTTTGACAGCTCGGCCATGTTCTGGTTCTTGGT
. : . : . : . : . : . :
rJMFF038O03- TCTCCAGATTCCTTGAGTCTGCATGCAGACAAGCTTTGAATCTCCTTGGGCTCGTATGTG
rJMSF031C09- TCTCCAGATTCCTTGAGTCTGCATGCAGACAAGCTTTGAATCTCCTTGGGCTCGTATGTG
rJMFF031J06- TCTCCAGATTCCTTGAGTCTGCATGCAGACAAGCTTTGAATCTCCTTGGGCTCGTATGTG
rJMSF029P14+ GCATGCAGACAAGCTTTGAATCTCCTTGGGCTCGTATGTG
____________________________________________________________
consensus TCTCCAGATTCCTTGAGTCTGCATGCAGACAAGCTTTGAATCTCCTTGGGCTCGTATGTG
. : . : . : . : . : . :
rJMFF038O03- TTTAAACCCTTTCTCAAGAGCATACTTCAATCCCAAGATCAAACCCCTGTATTCAGCAAC
rJMSF031C09- TTTAAACCCTTTCTCAAGAGCATACTTCAATCCCAAGATCAAACCCCTGTATTCAGCAAC
rJMFF031J06- TTTAAACCCTTTCTCAAGAGCATACTTCAATCCCAAGATCAAACCCCTGTATTCAGCAAC
rJMSF029P14+ TTTAAACCCTTTCTCAAGAGCATACTTCAATCCCAAGATCAAACCCCTGTATTCAGCAAC
____________________________________________________________
consensus TTTAAACCCTTTCTCAAGAGCATACTTCAATCCCAAGATCAAACCCCTGTATTCAGCAAC
. : . : . : . : . : . :
rJMFF038O03- GTTGTTGGTTGCAACACCCACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
rJMSF031C09- GTTGTTGGTTGCAACACCCACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
rJMFF031J06- GTTGTTGGTTGCAACACCCACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
rJMSF029P14+ GTTGTTGGTTGCAACACCCACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
JMFF031J06+ TCTGCAGC
JMFF038O03+ ATCTGCAGC
JMSF031C09+ CACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
____________________________________________________________
consensus GTTGTTGGTTGCAACACCCACGCCTTCACGCAACCGGAAAACCATACTTCCATCTGCAGC
. : . : . : . : . : . :
rJMFF038O03- ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
rJMSF031C09- ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
rJMFF031J06- ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
rJMSF029P14+ ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
JMFF031J06+ ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
JMFF038O03+ ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
JMSF031C09+ ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
____________________________________________________________
consensus ACGCAGCACAGCCCCAGCACCAGCAAGTCCAGGATTTCCCTTTGAAGCACCATCGAACTC
. : . : . : . : . : . :
rJMFF038O03- AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
rJMSF031C09- AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
rJMFF031J06- AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
rJMSF029P14+ AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
JMFF031J06+ AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
JMFF038O03+ AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGGAAAATTATCTAATT
JMSF031C09+ AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
____________________________________________________________
consensus AAGAATACAGGAACTACAGTAAGAAGAAATTGGAGGGACTTCAAGG-AAATTATCTAATT
. : . : . : . : . : . :
rJMFF038O03- TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
rJMSF031C09- TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
rJMFF031J06- TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
rJMSF029P14+ TTCCTGGTTTTTGNTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
JMFF031J06+ TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
JMFF038O03+ TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
JMSF031C09+ TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
____________________________________________________________
consensus TTCCTGGTTTTTGCTGAGTAGCTGTTGAATACAAAGGAGATCCAGCCATTTCCTGTGCCC
. : . : . : . : . : . :
rJMFF038O03- GTTTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAA
rJMSF031C09- G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAAC
rJMFF031J06- G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
rJMSF029P14+ G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
JMFF031J06+ G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
JMFF038O03+ G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
JMSF031C09+ G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
____________________________________________________________
consensus G-TTTCTCCTGAAAGTCCTTGCTGAGTGGTTTATCTTTGGAAGAACCAGGTTGCCGGAAA
. : . : . : . : . : . :
rJMFF031J06- GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
rJMSF029P14+ GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
JMFF031J06+ GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
JMFF038O03+ GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
JMSF031C09+ GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
____________________________________________________________
consensus GGACAGGGTACAAGTAAGCCAAAGAGATCATCTCGAACATCAGTGCTGTCAACGGAGTAC
. : . : . : . : . : . :
rJMFF031J06- ATTGCATTCTTAAG
rJMSF029P14+ ATTGCATTCTTAAGCCCATGAGAAGTAAGATATTCTTCAGATTCTTTAGCCAAGTGATAC
JMFF031J06+ ATTGCATTCTTAAGCCCATGAGAAGTAAGATATTCTTCAGATTCTTTAGCCAAGTGATAC
JMFF038O03+ ATTGCATTCTTAAGCCCATGAGAAGTAAGATATTCTTCAGATTCTTTAGCCAAGTGATAC
JMSF031C09+ ATTGCATTCTTAAGCCCATGAGAAGTAAGATATTCTTCAGATTCTTTAGCCAAGTGATAC
____________________________________________________________
consensus ATTGCATTCTTAAGCCCATGAGAAGTAAGATATTCTTCAGATTCTTTAGCCAAGTGATAC
. : . : . : . : . : . :
rJMSF029P14+ CCTTTATATACACTTATAGAAGGTTCACCAACAGAAGAGCGAATTAGGGCTTGGAGATCA
JMFF031J06+ CCTTTATATACACTTATAGAAGGTTCACCAACAGAAGAGCGAATTAGGGCTTGGAGATCA
JMFF038O03+ CCTTTATATACACTTATAGAAGGTTCACCAACAGAAGAGCGAATTAGGGCTTGGAGATCA
JMSF031C09+ CCTTTATATACACTTATAGAAGGTTCACCAACAGAAGAGCGAATTAGGGCTTGGAGATCA
____________________________________________________________
consensus CCTTTATATACACTTATAGAAGGTTCACCAACAGAAGAGCGAATTAGGGCTTGGAGATCA
. : . : . : . : . : . :
rJMSF029P14+ CTTAAGCTTTTGTAGATACCAATAACGTTGCCCTTACGGACGACATAAAATGCATCCTTT
JMFF031J06+ CTTAAGCTTTTGTAGATACCAATAACGTTGCCCTTACGGACGACATAAAATGCATCCTTT
JMFF038O03+ CTTAAGCTTTTGTAGATACCAATAACGTTGCCCTTACGGACGACATAAAATGCATCCTTT
JMSF031C09+ CTTAAGCTTTTGTAGATACCAATAACGTTGCCCTTACGGACGACATAAAATGCATCCTTT
____________________________________________________________
consensus CTTAAGCTTTTGTAGATACCAATAACGTTGCCCTTACGGACGACATAAAATGCATCCTTT
. : . : . : . : . : . :
rJMSF029P14+ TCGTCTCCCATTGATTGATGCTTCAGCCACAATGACA
JMFF031J06+ TCGTCTCCCATTGATTGATGCTTCAGCCACAATGACATCT
JMFF038O03+ TCGTCTCCCATTGATTGATGCTTCAGCCACAATGACATCT
JMSF031C09+ TCGTCTCCCATTGATTGATGCTTCAGCCACAATGACATCTACCCAGCTTCTAAGCTCTGA
____________________________________________________________
consensus TCGTCTCCCATTGATTGATGCTTCAGCCACAATGACATCTACCCAGCTTCTAAGCTCTGA
. : . : . : . : . : . :
JMSF031C09+ GCTCTCCACTCCCGACTCCCGAGTTTTGACAGCGATGTGTTGCGACATCCGACGACTAGC
____________________________________________________________
consensus GCTCTCCACTCCCGACTCCCGAGTTTTGACAGCGATGTGTTGCGACATCCGACGACTAGC