Contig 012061:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019M02Sequence257012061 (3)gb|EPS60166.1|4e-15hypothetical protein M569_14639, partial [Genlisea aurea]736004309 (2)ref|XP_006349667.1|2e-94PREDICTED: mitochondrial Rho GTPase 1-like [Solanum tuberosum]
JMSF031B10Sequence696012061 (3)ref|XP_004247162.1|7e-95PREDICTED: mitochondrial Rho GTPase 1 [Solanum lycopersicum]
JMSF033B13Sequence679012061 (3)ref|XP_004247162.1|1e-98PREDICTED: mitochondrial Rho GTPase 1 [Solanum lycopersicum]727004309 (2)ref|XP_006349667.1|5e-88PREDICTED: mitochondrial Rho GTPase 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF033B13+                             TTAAGAGCCCGGGCTTCATGATCAAAGAGTGGAGCTGTTGGA
JMSF031B10+                                   GCCCGGGCTTCATGATCAAAGAGTGGAGCTGTTGGA
                      ____________________________________________________________
consensus                               TTAAGAGCCCGGGCTTCATGATCAAAGAGTGGAGCTGTTGGA
 
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JMSF033B13+           TGAAGTACTGCCTTTTGTGCATAATAGAATACTTCAGGTACCTGAACCAAATTAGCTGCA
JMSF031B10+           TGAAGTACTGCCTTTTGTGCATAATAGAATACTTCAGGTACCTGAACCAAATTAGCTGCA
                      ____________________________________________________________
consensus             TGAAGTACTGCCTTTTGTGCATAATAGAATACTTCAGGTACCTGAACCAAATTAGCTGCA
 
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JMSF033B13+           GAGCATTCTATGCAAGTCTCAATCTCCCGAAACTGCTGCATGATAGGAGCCATCACCTGC
JMSF031B10+           GAGCATTCTATGCAAGTCTCAATCTCCCGAAACTGCTGCATGATAGGAGCCATCACCTGC
                      ____________________________________________________________
consensus             GAGCATTCTATGCAAGTCTCAATCTCCCGAAACTGCTGCATGATAGGAGCCATCACCTGC
 
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JMSF033B13+           TCTAGGATCATATGATGCTCCTCATCTTGCTTATCTAGCTTGCATCCAACAACAATGACT
JMSF031B10+           TCTAGGATCATATGATGCTCCTCATCTTGCTTATCTAGCTTGCATCCAACAACAATGACT
                      ____________________________________________________________
consensus             TCTAGGATCATATGATGCTCCTCATCTTGCTTATCTAGCTTGCATCCAACAACAATGACT
 
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JMSF033B13+           GGTGCCTTGAT------CTCCAGCCGACGAAATTCGTGAAGCCAGAAAGTGCTTAAGCGA
JMSF031B10+           GGTGCCTTGATCTATCCCTCCAGCCGACGAAATTCGTGAAGCCAGAAAGTGCTTAAGCGA
                      ____________________________________________________________
consensus             GGTGCCTTGATCTATCCCTCCAGCCGACGAAATTCGTGAAGCCAGAAAGTGCTTAAGCGA
 
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JMSF033B13+           TTCAGAGTGGCATGTTGATCGCACGCATAGGTCAACACTACTGAATCCGCCCGCTTCAAT
JMSF031B10+           TTCAGAGTGGCATGTTGATCGCACGCATAGGTCAACACTACTGAATCCGCCCGCTTCAAT
                      ____________________________________________________________
consensus             TTCAGAGTGGCATGTTGATCGCACGCATAGGTCAACACTACTGAATCCGCCCGCTTCAAT
 
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JMSF033B13+           TCTTCGGCGAGCTTACCTCTGCTCTCCAAACTCGATGATGTATCAATTATTGTGACGGGA
JMSF019M02+                                            GATGATGTATCAATGATTGTGACGGGA
JMSF031B10+           TCTTCGGCGAGCTTACCTCTGCTCTCCAAACTCGATGATGTATCAATTATTGTGACGGGA
                      ____________________________________________________________
consensus             TCTTCGGCGAGCTTACCTCTGCTCTCCAAACTCGATGATGTATCAATTATTGTGACGGGA
 
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JMSF033B13+           ACGTTCTCCGGATAGAGATCAGCGGGGAGGCGAGTGGGAGGAAGCACCGACGGGAGATCC
JMSF019M02+           ACGTTCTCCGGATAGAGATCCGCGGGGAGGCGAGTGGGAGGAAGCACCGGCGGGAGATCT
JMSF031B10+           ACGTTCTCCGGATAGAGATCAGCGGGGAGGCGAGTGGGAGGAAGCACCGACGGGAGATCC
                      ____________________________________________________________
consensus             ACGTTCTCCGGATAGAGATCAGCGGGGAGGCGAGTGGGAGGAAGCACCGACGGGAGATCC
 
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JMSF033B13+           TCCGGGAAGGACTCGGAAGCGGCCGCAGCGATGAGGCTGGACTTGCCGGTTGCGCGGTCG
JMSF019M02+           TCAGGGAATGACTCAGAAGCGGCGGCGGCGATGAGGCTGGACTTGCCGGTTGCGCGGTCT
JMSF031B10+           TCCGGGAAGGACTCGGAAGCGGCCGCAGCGATGAGGCTGGACTTGCCGGTTGCGCGGTCG
                      ____________________________________________________________
consensus             TCCGGGAAGGACTCGGAAGCGGCCGCAGCGATGAGGCTGGACTTGCCGGTTGCGCGGTCG
 
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JMSF033B13+           CCAACGACCACCACTCGGACGTTGGTGCGGCCGCCGGATGTTGAAGTGCCTGGCATTGGA
JMSF019M02+           CCGACGACCACCACTCGGACGTTGGTGCGGCCGCCGGAAGTTGAAGTGCCTGGCATTGGA
JMSF031B10+           CCAACGACCACCACTCGGACGTTGGTGCGGCCGCCGGATGTTGAAGTGCCTGGCATTGGA
                      ____________________________________________________________
consensus             CCAACGACCACCACTCGGACGTTGGTGCGGCCGCCGGATGTTGAAGTGCCTGGCATTGGA
 
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JMSF033B13+           TCGACGCTGGCGCTGTCTCGGAGAGCAGTTCGTAGCACGGCCACGCGTAAGCGTGAAGAG
JMSF019M02+           TCG                                                         
JMSF031B10+           TCGACGCTGGCGCTGTCTCGGAGAGCAGTTCGTAGCACGGCCACGCGTAAGCGTGAAGAG
                      ____________________________________________________________
consensus             TCGACGCTGGCGCTGTCTCGGAGAGCAGTTCGTAGCACGGCCACGCGTAAGCGTGAAGAG
 
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JMSF033B13+           AAATGGATTCGCTGCAATGAGTGCTGAAACGAGCTTGGTAGT                  
JMSF031B10+           AAATGGATTCGCTGCAATGAGTGCTGAAACGAGCTTGGTAGTGCCTATTTTTCTTTTCTC
                      ____________________________________________________________
consensus             AAATGGATTCGCTGCAATGAGTGCTGAAACGAGCTTGGTAGTGCCTATTTTTCTTTTCTC