Contig 012059:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS110D03+                                                               GTGGGGTA
                      ____________________________________________________________
consensus                                                                 GTGGGGTA
 
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JMFS096C12+                                                       AATGTCTGGATTTTGG
JMFS110D03+           CCAGGAACATTTCCAGTAGATGCTTGAGATTTGGGCTCCCTTTGAATGTCTGGA-TTTGG
JMSF030E15+                                                       AATGTCTGGATTTTGG
                      ____________________________________________________________
consensus             CCAGGAACATTTCCAGTAGATGCTTGAGATTTGGGCTCCCTTTGAATGTCTGGATTTTGG
 
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JMFS096C12+           GATACCGAAAGTCTTCCAAAAGATTTAGTTTCTTTGACAGGATCTGAATTTTGAGAAATT
JMFS110D03+           GATACCGAAAGTCTTCCAAAAGATTTAGTTTCTTTGACAGGATCTGAATTTTGAGAAATT
JMSF030E15+           GATACCGAAAGTCTTCCAAAAGATTTAGTTTCTTTGACAGGATCTGAATTTTGAGAAATT
                      ____________________________________________________________
consensus             GATACCGAAAGTCTTCCAAAAGATTTAGTTTCTTTGACAGGATCTGAATTTTGAGAAATT
 
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JMFS096C12+           GAAAGCCTGCCTAAGCTGGCTTTTGCAGAATCCTCTGCCAGTCCCGATAAAGTTGTGCTT
JMFS110D03+           GAAAGCCTGCCTAAGCTGGCTTTTGCAGAATCCTCTGCCAGTCCCGATAAAGTTGTGCTT
JMSF030E15+           GAAAGCCTGCCTAAGCTGGCTTTTGCAGAATCCTCTGCCAGTCCCGATAAAGTTGTGCTT
                      ____________________________________________________________
consensus             GAAAGCCTGCCTAAGCTGGCTTTTGCAGAATCCTCTGCCAGTCCCGATAAAGTTGTGCTT
 
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JMFS096C12+           GAATTAGACTTCACTTCAGAGTGACCATTTAATCGAGTATTAGTTCTAATTGTATATGGT
JMFS110D03+           GAATTAGACTTCACTTCAGAGTGACCATTTAATCGAGTATTAGTTCTAATTGTATATGGT
JMSF030E15+           GAATTAGACTTCACTTCAGAGTGACCATTTAATCGAGTATTAGTTCTAATTGTATATGGT
                      ____________________________________________________________
consensus             GAATTAGACTTCACTTCAGAGTGACCATTTAATCGAGTATTAGTTCTAATTGTATATGGT
 
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JMFS096C12+           TCAATGCGCGATATATCCACAACCCATACACCAACACAACTTTGATTGTAGGAACAGCCA
JMFS110D03+           TCAATGCGCGATATATCCACAACCCATACACCAACACAACTTTGATTGTAGGAACAGCCA
JMSF030E15+           TCAATGCGCGATATATCCACAACCCATACACCAACACAACTTTGATTGTAGGAACAGCCA
                      ____________________________________________________________
consensus             TCAATGCGCGATATATCCACAACCCATACACCAACACAACTTTGATTGTAGGAACAGCCA
 
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JMFS096C12+           AGAAGTTTCCCTTCATGGACATTTAGATCTGACAGTTTGGACCATCCTACATCTACAGAA
JMFS110D03+           AGAAGTTTCCCTTCATGGACATTTAGATCTGACAGTTTGGACCATCCTACATCTACAGAA
JMSF030E15+           AGAAGTTTCCCTTCATGGACATTTAGATCTGACAGTTTGGACCATCCTACATCTACAGAA
                      ____________________________________________________________
consensus             AGAAGTTTCCCTTCATGGACATTTAGATCTGACAGTTTGGACCATCCTACATCTACAGAA
 
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JMFS096C12+           TCATGACATCTAATTGGTTCCCATGAGAAAACCTTCATGCTCTCATGCAAACCACATAGT
JMFS110D03+           TCATGACATCTAATTGGTTCCCATGAGAAAACCTTCATGCTCTCATGCAAACCACATAGT
JMSF030E15+           TCATGACATCTAATTGGTTCCCATGAGAAAACCTTCATGCTCTCATGCAAACCACATAGT
                      ____________________________________________________________
consensus             TCATGACATCTAATTGGTTCCCATGAGAAAACCTTCATGCTCTCATGCAAACCACATAGT
 
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JMFS096C12+           AGGGTTTTCCCATCAGGGCTAAATGTCATAGAGCGCACTCCAGAAGTCT           
JMFS110D03+           AGGGTTTTCCCATCAGGGCTAAATGTCATAGAGCGCACTCCAGAAGTCTCAGGTCCAGCT
JMSF030E15+           AGGGTTTTCCCATCAGGGCTAAATGTCATAGAGCGCACTCCAGAAGTCTCAGGTCCAGCT
                      ____________________________________________________________
consensus             AGGGTTTTCCCATCAGGGCTAAATGTCATAGAGCGCACTCCAGAAGTCTCAGGTCCAGCT
 
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JMFS110D03+           GAGCCTATAAGTTCAAATGTCTCTAGATCCCAGAATTTAACTGTTCTGTCAGCTGAACCT
JMSF030E15+           GAGCCTATAAGTTCAAATGTCTCTAGATCCCAGAATTTAACTGTTCTGTCAGCTGAACCT
                      ____________________________________________________________
consensus             GAGCCTATAAGTTCAAATGTCTCTAGATCCCAGAATTTAACTGTTCTGTCAGCTGAACCT
 
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JMFS110D03+           GTTGCCAGCAAAAACTCATGTGGATGAAAATCAATGCACTGAATCTGGCCTTCATGA   
JMSF030E15+           GTTGCCAGCAAAAACTCATGTGGATGAAAATCAATGCACTGAATCTGGCCTTCATGACAT
                      ____________________________________________________________
consensus             GTTGCCAGCAAAAACTCATGTGGATGAAAATCAATGCACTGAATCTGGCCTTCATGACAT
 
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JMSF030E15+           TTAAATTCATGCATCAACTTTCCAGCAGTTAAATCCCACAGCTTCACAGTATTGTCTTCT
                      ____________________________________________________________
consensus             TTAAATTCATGCATCAACTTTCCAGCAGTTAAATCCCACAGCTTCACAGTATTGTCTTCT