Contig 012058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K24Sequence557012058 (5)emb|CDP01297.1|8e-56unnamed protein product [Coffea canephora]628005345 (5)ref|XP_009787502.1|3e-70PREDICTED: probable inactive receptor kinase At5g67200 [Nicotiana sylvestris]
JMFF030I03Sequence351012058 (5)emb|CDP01297.1|2e-28unnamed protein product [Coffea canephora]674005345 (5)ref|XP_009787502.1|4e-99PREDICTED: probable inactive receptor kinase At5g67200 [Nicotiana sylvestris]
JMFS017B02Sequence605012058 (5)emb|CDP01297.1|6e-80unnamed protein product [Coffea canephora]
JMSF030C02Sequence672012058 (5)ref|XP_009787502.1|2e-26PREDICTED: probable inactive receptor kinase At5g67200 [Nicotiana sylvestris]636005345 (5)ref|XP_009787502.1|1e-103PREDICTED: probable inactive receptor kinase At5g67200 [Nicotiana sylvestris]
JMSF052G17Sequence681012058 (5)emb|CDP01297.1|8e-84unnamed protein product [Coffea canephora]910005345 (5)ref|XP_009787502.1|2e-171PREDICTED: probable inactive receptor kinase At5g67200 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF052G17+                              CAGAGAGCTTTGTTGGAGGCAAACGCCGTCGTTNTGAAGCG
                      ____________________________________________________________
consensus                                CAGAGAGCTTTGTTGGAGGCAAACGCCGTCGTTNTGAAGCG
 
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JMFS017B02+                ATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
JMSF052G17+           CGATAATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
                      ____________________________________________________________
consensus             CGATAATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
 
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JMFS017B02+           CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
JMFF007K24+                                 GCCGGCANGGAGCNGTTGAGGCGGTTGGAGTNGAGACG
JMSF052G17+           CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
                      ____________________________________________________________
consensus             CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
 
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JMFS017B02+           GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
JMFF007K24+           GAGATAGTACAACCGGTCCAGACCGTTGAANGACGCCGGAATGTTGCCGGTGAGGTTGTT
JMSF052G17+           GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
                      ____________________________________________________________
consensus             GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
 
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JMFS017B02+           GTGGGAGAGATCAAGGGTTTCGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMFF007K24+           GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMSF052G17+           GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMSF030C02+                                       TGGAGANTGGAGATTNAGGGAGGAATAAGTCC
                      ____________________________________________________________
consensus             GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
 
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JMFS017B02+           ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMFF007K24+           ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMFF030I03+                                                         CGGGAAAGATCGGG
JMSF052G17+           ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMSF030C02+           NNTGAAGAGATTNCTGTCCAAAAACAGAACTTTCAGGTTANCCAGGCGGGAAAGATCGGG
                      ____________________________________________________________
consensus             ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
 
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JMFS017B02+           AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMFF007K24+           AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMFF030I03+           AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMSF052G17+           AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMSF030C02+           AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTNTGAGCTGGTCAAGCCGAGT
                      ____________________________________________________________
consensus             AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
 
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JMFS017B02+           CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMFF007K24+           CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMFF030I03+           CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMSF052G17+           CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMSF030C02+           CAGAGTATCCGGAGCAAAAACCCCATTCCAAACCCACCCTTTCACACACCAAACGAACCA
                      ____________________________________________________________
consensus             CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
 
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JMFS017B02+           CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMFF007K24+           CCTTTCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMFF030I03+           CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMSF052G17+           CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMSF030C02+           CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
                      ____________________________________________________________
consensus             CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
 
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JMFS017B02+           AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMFF007K24+           AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMFF030I03+           AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMSF052G17+           AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMSF030C02+           AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACACCAACAATGCCGACGCGT
                      ____________________________________________________________
consensus             AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
 
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JMFS017B02+           CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMFF007K24+           CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMFF030I03+           CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMSF052G17+           CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMSF030C02+           CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
                      ____________________________________________________________
consensus             CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
 
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JMFS017B02+           GCAAAACCATC                                                 
JMFF007K24+           GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT                      
JMFF030I03+           GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT                      
JMSF052G17+           GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT                      
JMSF030C02+           GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGTACAAGAAAACAACTCAAGAACC
                      ____________________________________________________________
consensus             GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGTACAAGAAAACAACTCAAGAACC
 
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JMSF030C02+           GGGAATTAAAGGGGAGAGGTTGAGAAATTTTACAGTTTTACTTCCATGGAAAGTGAAAGA
                      ____________________________________________________________
consensus             GGGAATTAAAGGGGAGAGGTTGAGAAATTTTACAGTTTTACTTCCATGGAAAGTGAAAGA
 
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JMSF030C02+           AAGAGGAGGGAATCGAGGGGTAAGCGACAAAAGCATACAAGAATGGCAGGAGTTGTCCTG
                      ____________________________________________________________
consensus             AAGAGGAGGGAATCGAGGGGTAAGCGACAAAAGCATACAAGAATGGCAGGAGTTGTCCTG
 
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JMSF030C02+           TCCAGTAGGAGAGTAGAGTGTAAAGGCAGGGTCGGAGTCAGAATCACGTGAAGGGAACCC
                      ____________________________________________________________
consensus             TCCAGTAGGAGAGTAGAGTGTAAAGGCAGGGTCGGAGTCAGAATCACGTGAAGGGAACCC