Contig 012055:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002N07Sequence221012055 (3)ref|NP_001274969.1|8e-09pectin methyl esterase [Solanum tuberosum] gb|AAF23892.1|AF152172_1 pectin methy736002894 (3)sp|P83218.1|PME_DAUCA8e-121RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase [Da
JMSF016P14Sequence466012055 (3)ref|XP_009606552.1|9e-27PREDICTED: pectinesterase/pectinesterase inhibitor U1 [Nicotiana tomentosiformi746002894 (3)sp|P83218.1|PME_DAUCA3e-122RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase [Da
JMSF029I18Sequence640012055 (3)ref|XP_009606552.1|5e-60PREDICTED: pectinesterase/pectinesterase inhibitor U1 [Nicotiana tomentosiformi694002894 (3)gb|KDP40627.1|2e-97hypothetical protein JCGZ_24626 [Jatropha curcas]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029I18+                               TCCGTCGAGGCAGGTTTCCTGGTTGGTAATGGCGGAGCTG
                      ____________________________________________________________
consensus                                 TCCGTCGAGGCAGGTTTCCTGGTTGGTAATGGCGGAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029I18+           ACCAGGGTTTTGAGGTCGTCGGCGTGGCGTATTAGAGATTTCTTCGTCGGGTACTGTTCC
                      ____________________________________________________________
consensus             ACCAGGGTTTTGAGGTCGTCGGCGTGGCGTATTAGAGATTTCTTCGTCGGGTACTGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029I18+           AGATCCTCGACGGCGGCGTGGAGCTCGTCGAGGGTCTCGTCCACCATCTCCACGCAGTCT
                      ____________________________________________________________
consensus             AGATCCTCGACGGCGGCGTGGAGCTCGTCGAGGGTCTCGTCCACCATCTCCACGCAGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF016P14+                      CTTCTCGCGTTTTGTCAGGTTTTTCCCGGCCTTGATTAGCTTCTTTATG
JMSF029I18+           TGCAGCGCCGTCTTCTCGCGTTTTGTCAGGTTTTTCCCGGCCTTGATTAGCTTCTTTATG
                      ____________________________________________________________
consensus             TGCAGCGCCGTCTTCTCGCGTTTTGTCAGGTTTTTCCCGGCCTTGATTAGCTTCTTTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF016P14+           GCCGCGGAGTTCTGCTCCACGGCGGCGATTGTGATGTTCAGAGATAGCTCGATGACGTCC
JMSF029I18+           GCCGCGGAGTTCTGCTCCACGGCGGCGATTGTGATGTTCAGAGATAGCTCGATGACGTCC
                      ____________________________________________________________
consensus             GCCGCGGAGTTCTGCTCCACGGCGGCGATTGTGATGTTCAGAGATAGCTCGATGACGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002N07+                                                    GGAGAAGCATAGTTCCGGG
JMSF016P14+           TTTTGGCTCGACAGTTTCTTGCCGGCGCCGTTGGCTATGGCGGAGAAGCATAGTTCCGGG
JMSF029I18+           TTTTGGCTCGACAGTTTCTTGCCGGCGCCGTTGGCTATGGCGGAGAAGCATAGTTCCGGG
                      ____________________________________________________________
consensus             TTTTGGCTCGACAGTTTCTTGCCGGCGCCGTTGGCTATGGCGGAGAAGCATAGTTCCGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002N07+           TAGAGAGTGCTGCTGCATGAAGACTTAACAATGGCGTGGGCTTCGGAGGAAAGTGCTTGA
JMSF016P14+           TAGAGAGTGCTGCTGCATGAAGACTTAACAATGGCGTGGGCTTCGGAGGAAAGTGCTTGA
JMSF029I18+           TAGAGAGTGCTGCTGCATGAAGACTTAACAATGGCGTGGGCTTCGGAGGAAAGTGCTTGA
                      ____________________________________________________________
consensus             TAGAGAGTGCTGCTGCATGAAGACTTAACAATGGCGTGGGCTTCGGAGGAAAGTGCTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002N07+           ACATCAGCGCCGTCGCCGGAGTTGTTTTTGATGGATTTAACTCCGGTTACAACTCCGACC
JMSF016P14+           ACATCAGCGCCGTCGCCGGAGTTGTTTTTGATGGATTTAACTCCGGTTACAACTCCGACC
JMSF029I18+           ACATCAGCGCCGTCGCCGGAGTTGTTTTTGATGGATTTAACTCCGGTTACAACTCCGACC
                      ____________________________________________________________
consensus             ACATCAGCGCCGTCGCCGGAGTTGTTTTTGATGGATTTAACTCCGGTTACAACTCCGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002N07+           ACCGCAGCTACGAGGAGAACTGATGCGAAGAGCGCTAGGAATATTTTCTTCTTTCTCCTG
JMSF016P14+           ACCGCAGCTACGAGGAGAACTGATGCGAAGAGCGCTAGGAATATTTTCTTCTTTCTCCTG
JMSF029I18+           ACCGCAGCTACGAGGAGAACTGATGCGAAGAGCGCTAGGAATATTTTCTTCTTTCTCCTG
                      ____________________________________________________________
consensus             ACCGCAGCTACGAGGAGAACTGATGCGAAGAGCGCTAGGAATATTTTCTTCTTTCTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002N07+           GGTTCGCCGGAAAGTGACAC                                        
JMSF016P14+           GGTTCGCCGGAAAGTGACACTCCGGCGAAGAATTCTTTAATAGTCTGCATTTGGATAATT
JMSF029I18+           GGTTCGCCGGAAAGTGACACTCCGGCGAAGAATTCTTTAATAGTCTGCATTTGGATAATT
                      ____________________________________________________________
consensus             GGTTCGCCGGAAAGTGACACTCCGGCGAAGAATTCTTTAATAGTCTGCATTTGGATAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF016P14+           TGGGAACCTTATCTTTAGAGAATATAATATTATATTATTCTTGTGAATATGTATG     
JMSF029I18+           TGGGAACCTTATCTTTAGAGAATATAATATTATATTATTCTTGTGAATATGTATGCAATC
                      ____________________________________________________________
consensus             TGGGAACCTTATCTTTAGAGAATATAATATTATATTATTCTTGTGAATATGTATGCAATC