| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN003G18 | Sequence | 642 | 012051 (5) | ref|XP_006366945.1| | 4e-129 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic-like [Solanum tuberosum] | |||||
| JMFN015N21 | Sequence | 618 | 012051 (5) | ref|XP_009792062.1| | 1e-82 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Nicotiana sylvestris] | |||||
| JMSF028K19 | Sequence | 681 | 012051 (5) | ref|XP_009792062.1| | 4e-63 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Nicotiana sylvestris] | 716 | 013547 (8) | ref|XP_004134855.1| | 347 | PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus] ref|XP_0041588 |
| JMSF042M23 | Sequence | 745 | 012051 (5) | ref|XP_009792062.1| | 4e-107 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Nicotiana sylvestris] | 666 | 012051 (5) | ref|XP_006366945.1| | 9e-108 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF042M23- AAAATTTCCTTGGTATCTCAAGGCTCTGAA
____________________________________________________________
consensus AAAATTTCCTTGGTATCTCAAGGCTCTGAA
. : . : . : . : . : . :
rJMSF042M23- ATACAAAGTGACCTTGGGAAAGAAGAACAGAAACAGAAATTACAAGAAGCTTCATTCGGC
____________________________________________________________
consensus ATACAAAGTGACCTTGGGAAAGAAGAACAGAAACAGAAATTACAAGAAGCTTCATTCGGC
. : . : . : . : . : . :
rJMSF042M23- ATATTGAATATTGATGTCACTGTTATTCAACTTGGTACAACAGAATTCCAATTTAGATGG
JMFN003G18+ GGTACAACAGAATTCCAATTTAGATGG
____________________________________________________________
consensus ATATTGAATATTGATGTCACTGTTATTCAACTTGGTACAACAGAATTCCAATTTAGATGG
. : . : . : . : . : . :
rJMSF042M23- CATCTAACCTTTGAGTAAGCTGGCGAGCTCACCTTTCTCGTACATGGAAGTCAAGATGTC
JMFN003G18+ CATCTAACCTTTGAGTAAGCTGGCGAGCTCACCTTTCTCGTACATGGAAGTCAAGATGTC
____________________________________________________________
consensus CATCTAACCTTTGAGTAAGCTGGCGAGCTCACCTTTCTCGTACATGGAAGTCAAGATGTC
. : . : . : . : . : . :
rJMSF042M23- ACATCCACCAACCAGTTCCCCGTTCACGTAAACCTGAGGGAATGTAGGCCAGTTACTGTA
JMFN003G18+ ACATCCACCAACCAGTTCCCCGTTCACGTAAACCTGAGGGAATGTAGGCCAGTTACTGTA
____________________________________________________________
consensus ACATCCACCAACCAGTTCCCCGTTCACGTAAACCTGAGGGAATGTAGGCCAGTTACTGTA
. : . : . : . : . : . :
rJMSF042M23- ACTCTTGAGCGTCTCTCTTAACCCAGTGTTATGTTCTTCATCAAGAACATCAAGACTTTC
JMFN003G18+ ACTCTTGAGCGTCTCTCTTAACCCAGTGTTATGTTCTTCATCAAGAACATCAAGACTTTC
____________________________________________________________
consensus ACTCTTGAGCGTCTCTCTTAACCCAGTGTTATGTTCTTCATCAAGAACATCAAGACTTTC
. : . : . : . : . : . :
rJMSF042M23- GTAATCCACTCCTTGACTCTCAAGAATTGCCACAACTCTCTGTGAAAAGCCACATAGTGG
JMFN003G18+ GTAATCCACTCCTTGACTCTCAAGAATTGCCACAACTCTCTGTGAAAAGCCACATAGTGG
JMSF042M23+ GTGAAAAGCCACATAGTGG
____________________________________________________________
consensus GTAATCCACTCCTTGACTCTCAAGAATTGCCACAACTCTCTGTGAAAAGCCACATAGTGG
. : . : . : . : . : . :
rJMSF042M23- AGCGCTTCGTGATCCTTTAATGAATGCCACCACCTTGTTCTCCTTCACTAGCCGGTCAAT
JMFN003G18+ AGCGCTTCGTGATCCTTTAATGAATGCCACCACCTTGTTCTCCTTCACTAGCCGGTCAAT
JMSF042M23+ AGCGCTTCGTGATCCTTTAATGAATGCCACCACCTTGTTCTCCTTCACTAGCCGGTCAAT
____________________________________________________________
consensus AGCGCTTCGTGATCCTTTAATGAATGCCACCACCTTGTTCTCCTTCACTAGCCGGTCAAT
. : . : . : . : . : . :
rJMSF042M23- GAGATCTTCCAGAGGCACCGTCAATTGGACATGTCGCCCTGGTGTTAGCCTCAGATCAGC
JMFN003G18+ GAGATCTTCCAGAGGCACCGTCAATTGGACATGTCGCCCTGGTGTTAGCCTCAAATCAGC
JMFN015N21+ TCAATTGGACATGTCGCCCTGGTGTTAGCCTCAGATCAGC
JMSF042M23+ GAGATCTTCCAGAGGCACCGTCAATTGGACATGTCGCCCTGGTGTTAGCCTCAGATCAGC
____________________________________________________________
consensus GAGATCTTCCAGAGGCACCGTCAATTGGACATGTCGCCCTGGTGTTAGCCTCAGATCAGC
. : . : . : . : . : . :
rJMSF042M23- CTTCTTCTTTGGTTGCTGCCGAACCCATGTAGTGTTTCCGGATTCATTACCCGGTGGTAC
JMFN003G18+ CTTCTTCTTTGGTTGCTGCCGAACCCATGTAGTGTTTCCGGATTCATTACCCGGTGGTAC
JMFN015N21+ CTTCTTCTTTGGTTGCTGCCGAACCCATGTAGTGTTTCCGGATTCATTACCCGGTGGTAC
JMSF042M23+ CTTCTTCTTTGGTTGCTGCCGAACCCATGTAGTGTTTCCGGATTCATTACCCGGTGGTAC
JMSF028K19+ GGATTCATTACCCGGTGGTAC
____________________________________________________________
consensus CTTCTTCTTTGGTTGCTGCCGAACCCATGTAGTGTTTCCGGATTCATTACCCGGTGGTAC
. : . : . : . : . : . :
rJMSF042M23- CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
JMFN003G18+ CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
JMFN015N21+ CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
JMSF042M23+ CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
JMSF028K19+ CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
____________________________________________________________
consensus CTTTCCAGTAGCTGCTATATGTTCTTCCATCCATGACTTCCAAGATTGGGTTAAAGCCGT
. : . : . : . : . : . :
rJMSF042M23- TCTATCAGGCTCATCCACAACACCAAACTTGACGGA
JMFN003G18+ TCTATCAGGCTCATCCACAACACCAAACTTGACGGAGGAACAGAGCTCGGGAAGAGATTT
JMFN015N21+ TCTATCAGGCTCATCCACAACACCAAACTTGACGGAGGAACAGAGCTCGGGAAGAGATTT
JMSF042M23+ TCTATCAGGCTCATCCACAACACCAAACTTGACGGAGGAACAGAGCTCGGGAAGAGATTT
JMSF028K19+ TCTATCAGGCTCATCCACAACACCAAACTTGACGGAGGAACAGAGCTCGGGAAGAGATTT
____________________________________________________________
consensus TCTATCAGGCTCATCCACAACACCAAACTTGACGGAGGAACAGAGCTCGGGAAGAGATTT
. : . : . : . : . : . :
JMFN003G18+ ATTGTGGGAGAGTACGCTGGCGGCGATGTTCCGAGATATGCCGACGAATTGCAGCTCGGA
JMFN015N21+ CTTGTGGGAGAGTACGCTGGCGGCGATGTTCCGAGATATGCCGACGAATTGCAGCTCGGA
JMSF042M23+ CTTGTGGGAGAGTACGCTGGCGGCGATGTTCCGAGATATGCCGACGAATTGCAGCTCGGA
JMSF028K19+ CTTGTGGGAGAGTACGCTGGCGGCGATGTTCCGAGATATGCCGACGAATTGCAGCTCGGA
____________________________________________________________
consensus CTTGTGGGAGAGTACGCTGGCGGCGATGTTCCGAGATATGCCGACGAATTGCAGCTCGGA
. : . : . : . : . : . :
JMFN003G18+ GCTACTGTCGTAGAC
JMFN015N21+ GCTACTGTCGTAGACAGCATAGACGCCGGAATCTTTGGGGAATATGCCACTTATTGCGTC
JMSF042M23+ GCTACTGTCGTAGACAGCATAGACGCCGGAATCTTTGGGGAATATGCCACTTATTGCGTC
JMSF028K19+ GCTACTGTCGTAGACAGCATAGACGCCGGAATCTTTGGGGAATATGCCACTTATTGCGTC
____________________________________________________________
consensus GCTACTGTCGTAGACAGCATAGACGCCGGAATCTTTGGGGAATATGCCACTTATTGCGTC
. : . : . : . : . : . :
JMFN015N21+ GGGCTCCGATGGAACGGCCACCAAGTCCGTCTCCGATAGCTTCTTCGCAGCAGAAACGAC
JMSF042M23+ GGGCTCCGATGGAACGGCCACCAAGTCCGTCTCCGATAGCTTCTTCGCAGCAGAAACGAC
JMSF028K19+ GGGCTCCGATGGAACGGCCACCAAGTCCGTCTCCGATAGCTTCTTCGCAGCAGAAACGAC
____________________________________________________________
consensus GGGCTCCGATGGAACGGCCACCAAGTCCGTCTCCGATAGCTTCTTCGCAGCAGAAACGAC
. : . : . : . : . : . :
JMFN015N21+ GAGGGTTAGGAACCGGGGCTTTGTTCGGTTGATGGGTCGAAGTCTTATGGAAGGGAAGAA
JMSF042M23+ GAGGGTTAGGAACCGGGGCTTTGTTCGGTTGATGGGTCGAAGTCTTATGGAAGGGAAGAA
JMSF028K19+ GAGGGTTAGGAACCGGGGCTTTGTTCGGTTGATGGGTCGAAGTCTTATGGAAGGGAAGAA
____________________________________________________________
consensus GAGGGTTAGGAACCGGGGCTTTGTTCGGTTGATGGGTCGAAGTCTTATGGAAGGGAAGAA
. : . : . : . : . : . :
JMFN015N21+ GATAGAAGAGTTCGGGAGTGAATGAAGGGGGAGTTTAGGGGTATAATGGGAATAAACGGT
JMSF042M23+ GATAGAAGAGTTCGGGAGTGAATGAAGGGGGAGTTTAGGGGTATAATGGGAATAAACGGT
JMSF028K19+ GATAGAAGAGTTCGGGAGTGAATGAAGGGGGAGTTTAGGGGTATAATGGGAATAAACGGT
____________________________________________________________
consensus GATAGAAGAGTTCGGGAGTGAATGAAGGGGGAGTTTAGGGGTATAATGGGAATAAACGGT
. : . : . : . : . : . :
JMFN015N21+ GAATAGTGACGGAATAGAAGACCGGGAGCTCGCCGTAGCCGGTGATGAGATACTGATTGT
JMSF042M23+ GAATAGTGACGGAATAGAAGACCGGGAGCTCGCCGTAGCCGGTGATGAGATACTGATTGT
JMSF028K19+ GAATAGTGACGGAATAGAAGACCGGGAGCTCGCCGTAGCCGGTGATGAGATACTGATTGT
____________________________________________________________
consensus GAATAGTGACGGAATAGAAGACCGGGAGCTCGCCGTAGCCGGTGATGAGATACTGATTGT
. : . : . : . : . : . :
JMFN015N21+ GGCCATCTAGGCTTAGATTAGGAGACGAGTGAGAAGCT
JMSF042M23+ GGCCATCTAGGCTTAGATTAGGAGACGAGTGAGAAGCTGAGAACTATGAAGGCGAATATG
JMSF028K19+ GGCCATCTAGGCTTAGATTAGGAGACGAGTGAGAAGCTGAGAACTATGAAGGCGAATATG
____________________________________________________________
consensus GGCCATCTAGGCTTAGATTAGGAGACGAGTGAGAAGCTGAGAACTATGAAGGCGAATATG
. : . : . : . : . : . :
JMSF042M23+ AAGAT
JMSF028K19+ AAGATGGCCGTGTTTAGAGATAAATGGAGCTATATGTCATGGGATCAGAGTCCACCTTGC
____________________________________________________________
consensus AAGATGGCCGTGTTTAGAGATAAATGGAGCTATATGTCATGGGATCAGAGTCCACCTTGC
. : . : . : . : . : . :
JMSF028K19+ AATGTCAACCCGAATTCAAAATTAAGCAGTGAACCAAATGTTGAGACTCAAAGCCTCTTC
____________________________________________________________
consensus AATGTCAACCCGAATTCAAAATTAAGCAGTGAACCAAATGTTGAGACTCAAAGCCTCTTC