clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF001C14 | Sequence | 338 | 012050 (3) | ref|XP_009768622.1| | 4e-29 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11 | 769 | 007142 (3) | ref|XP_009757564.1| | 1e-84 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [ |
JMSF028J01 | Sequence | 660 | 012050 (3) | ref|XP_009768622.1| | 1e-50 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11 | 705 | 007142 (3) | ref|XP_009757564.1| | 1e-66 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [ |
JMSF031J08 | Sequence | 671 | 012050 (3) | ref|XP_009768622.1| | 1e-66 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11 | 778 | 007142 (3) | ref|XP_009757564.1| | 6e-92 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [ |
This contig is upended
. : . : . : . : . : . :
JMSF031J08+ AGTTCCAGCCCGAAACCGTACTGCCCCG
____________________________________________________________
consensus AGTTCCAGCCCGAAACCGTACTGCCCCG
. : . : . : . : . : . :
JMSF031J08+ TCCCGGGATCATCTAACGACTTCCACGACGTGAGAAACCGGTTCAAACCGGTTTTCTTGT
____________________________________________________________
consensus TCCCGGGATCATCTAACGACTTCCACGACGTGAGAAACCGGTTCAAACCGGTTTTCTTGT
. : . : . : . : . : . :
JMSF031J08+ CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
JMSF028J01+ CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
____________________________________________________________
consensus CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
. : . : . : . : . : . :
JMSF031J08+ TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
JMSF028J01+ TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
____________________________________________________________
consensus TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
. : . : . : . : . : . :
JMSF031J08+ AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
JMSF028J01+ AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
____________________________________________________________
consensus AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
. : . : . : . : . : . :
JMSF031J08+ TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
JMSF001C14+ GTCTNGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
JMSF028J01+ TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
____________________________________________________________
consensus TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
. : . : . : . : . : . :
JMSF031J08+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
JMSF001C14+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
JMSF028J01+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
____________________________________________________________
consensus TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
. : . : . : . : . : . :
JMSF031J08+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
JMSF001C14+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
JMSF028J01+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
____________________________________________________________
consensus AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
. : . : . : . : . : . :
JMSF031J08+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
JMSF001C14+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
JMSF028J01+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
____________________________________________________________
consensus ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
. : . : . : . : . : . :
JMSF031J08+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
JMSF001C14+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
JMSF028J01+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
____________________________________________________________
consensus CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
. : . : . : . : . : . :
JMSF031J08+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
JMSF001C14+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGAC
JMSF028J01+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
____________________________________________________________
consensus CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
. : . : . : . : . : . :
JMSF031J08+ CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCC
JMSF028J01+ CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCCATCTTCTACTGCGCATT
____________________________________________________________
consensus CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCCATCTTCTACTGCGCATT
. : . : . : . : . : . :
JMSF028J01+ AACATATATCCATTTATTGTAAACCAACCCAAATAAATTGAAAAACTTGCTTCGCTAGCC
____________________________________________________________
consensus AACATATATCCATTTATTGTAAACCAACCCAAATAAATTGAAAAACTTGCTTCGCTAGCC