Contig 012050:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001C14Sequence338012050 (3)ref|XP_009768622.1|4e-29PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11769007142 (3)ref|XP_009757564.1|1e-84PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [
JMSF028J01Sequence660012050 (3)ref|XP_009768622.1|1e-50PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11705007142 (3)ref|XP_009757564.1|1e-66PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [
JMSF031J08Sequence671012050 (3)ref|XP_009768622.1|1e-66PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11778007142 (3)ref|XP_009757564.1|6e-92PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031J08+ AGTTCCAGCCCGAAACCGTACTGCCCCG
                      ____________________________________________________________
consensus AGTTCCAGCCCGAAACCGTACTGCCCCG
 
. : . : . : . : . : . :
JMSF031J08+ TCCCGGGATCATCTAACGACTTCCACGACGTGAGAAACCGGTTCAAACCGGTTTTCTTGT
                      ____________________________________________________________
consensus TCCCGGGATCATCTAACGACTTCCACGACGTGAGAAACCGGTTCAAACCGGTTTTCTTGT
 
. : . : . : . : . : . :
JMSF031J08+ CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
JMSF028J01+ CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
                      ____________________________________________________________
consensus CCACCCCGAGTTTCATTAATGGCAGTCTTGTATTCGTGGGATAATCGAAGCTCTGCCATG
 
. : . : . : . : . : . :
JMSF031J08+ TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
JMSF028J01+ TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
                      ____________________________________________________________
consensus TAATAGCCCTTCTATCATGGTACAAAACCAGGTTCCCGGTATCCTGTAGCTGAGCGGAAT
 
. : . : . : . : . : . :
JMSF031J08+ AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
JMSF028J01+ AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
                      ____________________________________________________________
consensus AAGTTCTTGTCCCCGTGGCCGGAGAAGAAAGACTGGTGTTCCAGACGGAAACATTGGTCT
 
. : . : . : . : . : . :
JMSF031J08+ TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
JMSF001C14+ GTCTNGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
JMSF028J01+ TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
                      ____________________________________________________________
consensus TCTTGTCTTGGATGACAAGGTTTCCGGCGCGGTCGATAAAGAGGACCCCGGATGTACCGT
 
. : . : . : . : . : . :
JMSF031J08+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
JMSF001C14+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
JMSF028J01+ TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
                      ____________________________________________________________
consensus TGACGGGGTTGTCTCTGTTAGCAACCCAAACCACTCTCTGGTTGGGGATGTGTTGGTACC
 
. : . : . : . : . : . :
JMSF031J08+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
JMSF001C14+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
JMSF028J01+ AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
                      ____________________________________________________________
consensus AGATTCCGACGTATCGTTTTCCGACGGAGTTCCCGGGGGTGAAGAAGCCGAGAAAAAAAG
 
. : . : . : . : . : . :
JMSF031J08+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
JMSF001C14+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
JMSF028J01+ ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
                      ____________________________________________________________
consensus ATGTCCCGTTAGAGATTAACACATCCCCATCTTTGAGAGGTTGGTTGAAGGTAATGGTGT
 
. : . : . : . : . : . :
JMSF031J08+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
JMSF001C14+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
JMSF028J01+ CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
                      ____________________________________________________________
consensus CCGTGGAACTGCACAAGCATACGAGAAGTGAAAGAAAGAGTAGAGATAAGGTGGTGGTTG
 
. : . : . : . : . : . :
JMSF031J08+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
JMSF001C14+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGAC
JMSF028J01+ CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
                      ____________________________________________________________
consensus CGGTTGTCTGTCTTCCCATATTTCAGTTTGCTGTGCTCGACTGTTTTAAGGAAGACGGAA
 
. : . : . : . : . : . :
JMSF031J08+ CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCC
JMSF028J01+ CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCCATCTTCTACTGCGCATT
                      ____________________________________________________________
consensus CATGAATACATGATACTTGGGAAGAAAATAGGCCCCGGCCCCCATCTTCTACTGCGCATT
 
. : . : . : . : . : . :
JMSF028J01+ AACATATATCCATTTATTGTAAACCAACCCAAATAAATTGAAAAACTTGCTTCGCTAGCC
                      ____________________________________________________________
consensus AACATATATCCATTTATTGTAAACCAACCCAAATAAATTGAAAAACTTGCTTCGCTAGCC